Wiener filter reloaded: fast signal reconstruction without preconditioning

We present a high performance solution to the Wiener filtering problem via a formulation that is dual to the recently developed messenger technique. This new dual messenger algorithm, like its predecessor, efficiently calculates the Wiener filter solution of large and complex data sets without preconditioning and can account for inhomogeneous noise distributions and arbitrary mask geometries. We demonstrate the capabilities of this scheme in signal reconstruction by applying it on a simulated cosmic microwave background (CMB) temperature data set. The performance of this new method is compared to that of the standard messenger algorithm and the preconditioned conjugate gradient (PCG) approach, using a series of well-known convergence diagnostics and their processing times, for the particular problem under consideration. This variant of the messenger algorithm matches the performance of the PCG method in terms of the effectiveness of reconstruction of the input angular power spectrum and converges smoothly to the final solution. The dual messenger algorithm outperforms the standard messenger and PCG methods in terms of execution time, as it runs to completion around 2 and 3-4 times faster than the respective methods, for the specific problem considered.Comment: 13 pages, 10 figures. Accepted for publication in MNRAS main journa

Probing cosmology and gravity with redshift-space distortions around voids

Cosmic voids in the large-scale structure of the Universe affect the peculiar motions of objects in their vicinity. Although these motions are difficult to observe directly, the clustering pattern of their surrounding tracers in redshift space is influenced in a unique way. This allows to investigate the interplay between densities and velocities around voids, which is solely dictated by the laws of gravity. With the help of $N$-body simulations and derived mock-galaxy catalogs we calculate the average density fluctuations around voids identified with a watershed algorithm in redshift space and compare the results with the expectation from general relativity and the $\Lambda$CDM model. We find linear theory to work remarkably well in describing the dynamics of voids. Adopting a Bayesian inference framework, we explore the full posterior of our model parameters and forecast the achievable accuracy on measurements of the growth rate of structure and the geometric distortion through the Alcock-Paczynski effect. Systematic errors in the latter are reduced from $\sim15\%$ to $\sim5\%$ when peculiar velocities are taken into account. The relative parameter uncertainties in galaxy surveys with number densities comparable to the SDSS MAIN (CMASS) sample probing a volume of $1h^{-3}{\rm Gpc}^3$ yield $\sigma_{f/b}\left/(f/b)\right.\sim2\%$ ($20\%$) and $\sigma_{D_AH}/D_AH\sim0.2\%$ ($2\%$), respectively. At this level of precision the linear-theory model becomes systematics dominated, with parameter biases that fall beyond these values. Nevertheless, the presented method is highly model independent; its viability lies in the underlying assumption of statistical isotropy of the Universe.Comment: 38 pages, 14 figures. Published in JCAP. Referee comments incorporated, typos corrected, references added. Considerably improved results thanks to consideration of full covariance matrix in the MCMC analysi

A response to arXiv:1310.2791: A self-consistent public catalogue of voids and superclusters in the SDSS Data Release 7 galaxy surveys

Recently, Nadathur & Hotchkiss (2013) submitted a paper discussing a new cosmic void catalog. This paper includes claims about the void catalog described in Sutter et al. (2012). In this note, we respond to those claims, clarify some discrepancies between the text of Sutter et al. (2012) and the most recent version of the catalog, and provide some comments on the differences between our catalog and that of Nadathur & Hotchkiss (2013). All updates and documentation for our catalog are available at http://www.cosmicvoids.net.Comment: 3 pages, 1 figure, public catalog available at http://www.cosmicvoids.ne

Precision cosmology with voids: definition, methods, dynamics

We propose a new definition of cosmic voids based on methods of Lagrangian orbit reconstruction as well as an algorithm to find them in actual data called DynamIcal Void Analysis. Our technique is intended to yield results which can be modelled sufficiently accurately to create a new probe of precision cosmology. We then develop an analytical model of the ellipticity of voids found by our method based on the Zel’dovich approximation. We measure in N-body simulation that this model is precise at the ~0.1 per cent level for the mean ellipticity of voids of size greater than ~4 h ^(−1) Mpc. We estimate that at this scale we are able to predict the ellipticity with an accuracy of σ_ε ~ 0.02. Finally, we compare the distribution of void shapes in N-body simulation for two different equations of state w of the dark energy. We conclude that our method is far more accurate than Eulerian methods and is therefore promising as a precision probe of dark energy phenomenology

Constraints on Cosmology and Gravity from the Dynamics of Voids

The Universe is mostly composed of large and relatively empty domains known as cosmic voids, whereas its matter content is predominantly distributed along their boundaries. The remaining material inside them, either dark or luminous matter, is attracted to these boundaries and causes voids to expand faster and to grow emptier over time. Using the distribution of galaxies centered on voids identified in the Sloan Digital Sky Survey and adopting minimal assumptions on the statistical motion of these galaxies, we constrain the average matter content $\Omega_\mathrm{m}=0.281\pm0.031$ in the Universe today, as well as the linear growth rate of structure $f/b=0.417\pm0.089$ at median redshift $\bar{z}=0.57$, where $b$ is the galaxy bias ($68\%$ C.L.). These values originate from a percent-level measurement of the anisotropic distortion in the void-galaxy cross-correlation function, $\varepsilon = 1.003\pm0.012$, and are robust to consistency tests with bootstraps of the data and simulated mock catalogs within an additional systematic uncertainty of half that size. They surpass (and are complementary to) existing constraints by unlocking cosmological information on smaller scales through an accurate model of nonlinear clustering and dynamics in void environments. As such, our analysis furnishes a powerful probe of deviations from Einstein's general relativity in the low-density regime which has largely remained untested so far. We find no evidence for such deviations in the data at hand.Comment: 11 pages, 7 figures. Reflects published version in PRL including Supplemental Materia

Quantitative measurement of permeabilization of living cells by terahertz attenuated total reflection

International audienceUsing Attenuated Total Reflection imaging technique in the terahertz domain, we demonstrate non-invasive, non-staining real time measurements of cytoplasm leakage during permeabilization of epithelial cells by saponin. The terahertz signal is mostly sensitive to the intracellular protein concentration in the cells, in a very good agreement with standard bicinchoninic acid protein measurements. It opens the way to in situ real time dynamics of protein content and permeabilization in live cells

Sparse sampling, galaxy bias, and voids

To study the impact of sparsity and galaxy bias on void statistics, we use a single large-volume, high-resolution N-body simulation to compare voids in multiple levels of subsampled dark matter, halo populations, and mock galaxies from a Halo Occupation Distribution model tuned to different galaxy survey densities. We focus our comparison on three key observational statistics: number functions, ellipticity distributions, and radial density profiles. We use the hierarchical tree structure of voids to interpret the impacts of sampling density and galaxy bias, and theoretical and empirical functions to describe the statistics in all our sample populations. We are able to make simple adjustments to theoretical expectations to offer prescriptions for translating from analytics to the void properties measured in realistic observations. We find that sampling density has a much larger effect on void sizes than galaxy bias. At lower tracer density, small voids disappear and the remaining voids are larger, more spherical, and have slightly steeper profiles. When a proper lower mass threshold is chosen, voids in halo distributions largely mimic those found in galaxy populations, except for ellipticities, where galaxy bias leads to higher values. We use the void density profile of Hamaus et al. (2014) to show that voids follow a self-similar and universal trend, allowing simple translations between voids studied in dark matter and voids identified in galaxy surveys. We have added the mock void catalogs used in this work to the Public Cosmic Void Catalog at http://www.cosmicvoids.net.Comment: 11 pages, 7 figures, MNRAS accepted. Minor changes from previous version. Public catalog available at http://www.cosmicvoids.ne