Ecological and Genetic Consequences of Climate Change Impacting Species Distributions, with Specific Cases in Whitebark Pine (Pinus albicaulis Engelm.)

Climate is widely recognized as a primary factor contributing to species distribution limits. In turn, species’ geographic ranges have contracted and expanded in concert with Earth’s climatic history and are predicted to shift in response to future climate change. We investigated the ecological and genetic consequences of species distributions in flux with their historical, current, and projected future climatic environments. Chapter 1 introduces themes and background information related to the thesis research found in Chapters 2 through 4. In Chapter 2, we questioned the extent to which ancestral climate-related traits are conserved through vast periods of evolutionary time spanning the Cenozoic. We found a significant correlation between mean annual temperatures experienced by ancestral plant species and those of their modern descendants, supporting the theory that plant lineages have largely tracked suitable climates throughout Earth’s history. In Chapter 3, we used niche modeling applications to predict the locations where whitebark pine (Pinus albicaulis Engelm.), a threatened high elevation tree species, may seek refuge with future climate change. We found regions dominated by Wilderness Areas where whitebark pine is predicted to perform well, and our results supported the species future climatic niche shift with respect to elevation but not latitude. We suggested offsetting the species’ expected reduction in high elevation habitat by returning to a more prevalent fire regime, which was historically important to the species survival among competitive shade tolerant taxa at lower elevations. In Chapter 4, we examined the genetic consequences of the Last Glacial Maximum on phylogeographic patterns of whitebark pine. Significant patterns of isolation by distance were detected by latitude and longitude, and species population structure was poorly defined. Whitebark pine genetic partitioning was low within and among populations, which may benefit the species as it becomes increasingly endangered by pests, pathogens, climate change, and reduced fire frequency. As the threat of anthropogenic climate change is on the rise, future studies will benefit conservation efforts by further untangling the array of ecological and genetic impacts associated with a changing climate. Chapter 5 presents the thesis conclusion, tying together research findings from Chapters 2 through 4

Agricultural growth linkages in Sub-Saharan Africa:

How much extra net income growth can be had in rural areas of Africa by increasing the spending power of local households? The answer depends on how rural households spend increments to income, whether the items desired can be imported to the local area in response to increased demand, and, if not, whether increased demand will lead to new local production or simply to price rises. For every dollar in new farm income earned, at least one additional dollar could be realized from growth multipliers, according to Agricultural Growth Linkages in Sub-Saharan Africa.Income Rural areas Africa., Agricultural development Africa., Agricultural policy Economic aspects., Households Zimbabwe., Social accounting., Africa sub-Saharan,

Liquid crystal director fluctuations and surface anchoring by molecular simulation

We propose a simple and reliable method to measure the liquid crystal surface anchoring strength by molecular simulation. The method is based on the measurement of the long-range fluctuation modes of the director in confined geometry. As an example, molecular simulations of a liquid crystal in slab geometry between parallel walls with homeotropic anchoring have been carried out using the Monte Carlo technique. By studying different slab thicknesses, we are able to calculate separately the position of the elastic boundary condition, and the extrapolation length

Dependence of Drift Tube Performance on the Anode Wire Diameter

Cylindrical pressurized drift tubes with different anode wire diameters wereoperated in a 170~GeV muon test beam. The dependences of spatialresolution, efficiency and streamer probability on the anode wirediameter were measured. The resolution measurements are compared with a simulation

Phase-field-crystal models for condensed matter dynamics on atomic length and diffusive time scales: an overview

Here, we review the basic concepts and applications of the phase-field-crystal (PFC) method, which is one of the latest simulation methodologies in materials science for problems, where atomic- and microscales are tightly coupled. The PFC method operates on atomic length and diffusive time scales, and thus constitutes a computationally efficient alternative to molecular simulation methods. Its intense development in materials science started fairly recently following the work by Elder et al. [Phys. Rev. Lett. 88 (2002), p. 245701]. Since these initial studies, dynamical density functional theory and thermodynamic concepts have been linked to the PFC approach to serve as further theoretical fundaments for the latter. In this review, we summarize these methodological development steps as well as the most important applications of the PFC method with a special focus on the interaction of development steps taken in hard and soft matter physics, respectively. Doing so, we hope to present today's state of the art in PFC modelling as well as the potential, which might still arise from this method in physics and materials science in the nearby future.Comment: 95 pages, 48 figure

Topological Defects in Nematic Droplets of Hard Spherocylinders

Using computer simulations we investigate the microscopic structure of the singular director field within a nematic droplet. As a theoretical model for nematic liquid crystals we take hard spherocylinders. To induce an overall topological charge, the particles are either confined to a two-dimensional circular cavity with homeotropic boundary or to the surface of a three-dimensional sphere. Both systems exhibit half-integer topological point defects. The isotropic defect core has a radius of the order of one particle length and is surrounded by free-standing density oscillations. The effective interaction between two defects is investigated. All results should be experimentally observable in thin sheets of colloidal liquid crystals.Comment: 13 pages, 16 figures, Phys. Rev.

Minimal residual disease prior to allogeneic hematopoietic cell transplantation in acute myeloid leukemia: a meta-analysis

Minimal residual disease prior to allogeneic hematopoietic cell transplantation has been associated with increased risk of relapse and death in patients with acute myeloid leukemia, but detection methodologies and results vary widely. We performed a systematic review and meta-analysis evaluating the prognostic role of minimal residual disease detected by polymerase chain reaction or multiparametric flow cytometry before transplant. We identified 19 articles published between January 2005 and June 2016 and extracted hazard ratios for leukemia-free survival, overall survival, and cumulative incidences of relapse and non-relapse mortality. Pre-transplant minimal residual disease was associated with worse leukemia-free survival (HR=2.76 [1.90-4.00]), overall survival (HR=2.36 [1.73-3.22]), and cumulative incidence of relapse (HR=3.65 [2.53-5.27]), but not non-relapse mortality (HR=1.12 [0.81-1.55]). These associations held regardless of detection method, conditioning intensity, and patient age. Adverse cytogenetics was not an independent risk factor for death or relapse. There was more heterogeneity among studies using flow cytometry-based than WT1 polymerase chain reaction-based detection (I(2)=75.1% vs. <0.1% for leukemia-free survival, 67.8% vs. <0.1% for overall survival, and 22.1% vs. <0.1% for cumulative incidence of relapse). These results demonstrate a strong relationship between pre-transplant minimal residual disease and post-transplant relapse and survival. Outcome heterogeneity among studies using flow-based methods may underscore site-specific methodological differences or differences in test performance and interpretation