Anneal-path correction in flux qubits

Quantum annealers require accurate control and optimized operation schemes to reduce noise levels, in order to eventually demonstrate a computational advantage over classical algorithms. We study a high coherence four-junction capacitively shunted flux qubit (CSFQ), using dispersive measurements to extract system parameters and model the device. Josephson junction asymmetry inherent to the device causes a deleterious nonlinear cross-talk when annealing the qubit. We implement a nonlinear annealing path to correct the asymmetry in-situ, resulting in a substantial increase in the probability of the qubit being in the correct state given an applied flux bias. We also confirm the multi-level structure of our CSFQ circuit model by annealing it through small spectral gaps and observing quantum signatures of energy level crossings. Our results demonstrate an anneal-path correction scheme designed and implemented to improve control accuracy for high-coherence and high-control quantum annealers, which leads to an enhancement of success probability in annealing protocols.Comment: v2 published versio

Grand Canyon provenance for orthoquartzite clasts in the lower Miocene of coastal southern California

This research was supported by National Science Foundation (NSF) grants EAR 10-19896 and EAR 14-51055 awarded to B. Wernicke, EAR 17-28690 awarded to J. Stock, and OPP 13-41729 awarded to J. Kirschvink. We also acknowledge NSF grant EAR 16-49254 awarded to G. Gehrels at the University of Arizona for support of the Arizona LaserChron Center.Orthoquartzite detrital source regions in the Cordilleran interior yield clast populations with distinct spectra of paleomagnetic inclinations and detrital zircon ages that can be used to trace the provenance of gravels deposited along the western margin of the Cordilleran orogen. An inventory of characteristic remnant magnetizations (CRMs) from >700 sample cores from orthoquartzite source regions defines a low-inclination population of Neoproterozoic-Paleozoic age in the Mojave Desert-Death Valley region (and in correlative strata in Sonora, Mexico) and a moderate- to high-inclination population in the 1.1 Ga Shinumo Formation in eastern Grand Canyon. Detrital zircon ages can be used to distinguish Paleoproterozoic to mid-Mesoproterozoic (1.84-1.20 Ga) clasts derived from the central Arizona highlands region from clasts derived from younger sources that contain late Mesoproterozoic zircons (1.20-1.00 Ga). Characteristic paleomagnetic magnetizations were measured in 44 densely cemented orthoquartzite clasts, sampled from lower Miocene portions of the Sespe Formation in the Santa Monica and Santa Ana mountains and from a middle Eocene section in Simi Valley. Miocene Sespe clast inclinations define a bimodal population with modes near 15 degrees and 45 degrees. Eight samples from the steeper Miocene mode for which detrital zircon spectra were obtained all have spectra with peaks at 1.2, 1.4, and 1.7 Ga. One contains Paleozoic and Mesozoic peaks and is probably Jurassic. The remaining seven define a population of clasts with the distinctive combination of moderate to high inclination and a cosmopolitan age spectrum with abundant grains younger than 1.2 Ga. The moderate to high inclinations rule out a Mojave Desert-Death Valley or Sonoran region source population, and the cosmopolitan detrital zircon spectra rule out a central Arizona highlands source population. The Shinumo Formation, presently exposed only within a few hundred meters elevation of the bottom of eastern Grand Canyon, thus remains the only plausible, known source for the moderate- to high-inclination clast population. If so, then the Upper Granite Gorge of the eastern Grand Canyon had been eroded to within a few hundred meters of its current depth by early Miocene time (ca. 20 Ma). Such an unroofing event in the eastern Grand Canyon region is independently confirmed by (U-Th)/He thermochronology. Inclusion of the eastern Grand Canyon region in the Sespe drainage system is also independently supported by detrital zircon age spectra of Sespe sandstones. Collectively, these data define a mid-Tertiary, SW-flowing "Arizona River" drainage system between the rapidly eroding eastern Grand Canyon region and coastal California.Publisher PDFPeer reviewe

Tumor-associated endothelial cells display GSTP1 and RARβ2 promoter methylation in human prostate cancer

BACKGROUND: A functional blood supply is essential for tumor growth and proliferation. However, the mechanism of blood vessel recruitment to the tumor is still poorly understood. Ideally, a thorough molecular assessment of blood vessel cells would be critical in our comprehension of this process. Yet, to date, there is little known about the molecular makeup of the endothelial cells of tumor-associated blood vessels, due in part to the difficulty of isolating a pure population of endothelial cells from the heterogeneous tissue environment. METHODS: Here we describe the use of a recently developed technique, Expression Microdissection, to isolate endothelial cells from the tumor microenvironment. The methylation status of the dissected samples was evaluated for GSTP1 and RARβ2 promoters via the QMS-PCR method. RESULTS: Comparing GSTP1 and RARβ2 promoter methylation data, we show that 100% and 88% methylation is detected, respectively, in the tumor areas, both in epithelium and endothelium. Little to no methylation is observed in non-tumor tissue areas. CONCLUSION: We applied an accurate microdissection technique to isolate endothelial cells from tissues, enabling DNA analysis such as promoter methylation status. The observations suggest that epigenetic alterations may play a role in determining the phenotype of tumor-associated vasculature

Learning-based Calibration of Flux Crosstalk in Transmon Qubit Arrays

Superconducting quantum processors comprising flux-tunable data and coupler qubits are a promising platform for quantum computation. However, magnetic flux crosstalk between the flux-control lines and the constituent qubits impedes precision control of qubit frequencies, presenting a challenge to scaling this platform. In order to implement high-fidelity digital and analog quantum operations, one must characterize the flux crosstalk and compensate for it. In this work, we introduce a learning-based calibration protocol and demonstrate its experimental performance by calibrating an array of 16 flux-tunable transmon qubits. To demonstrate the extensibility of our protocol, we simulate the crosstalk matrix learning procedure for larger arrays of transmon qubits. We observe an empirically linear scaling with system size, while maintaining a median qubit frequency error below $300$ kHz

Evolution of 1/f1/f Flux Noise in Superconducting Qubits with Weak Magnetic Fields

The microscopic origin of $1/f$ magnetic flux noise in superconducting circuits has remained an open question for several decades despite extensive experimental and theoretical investigation. Recent progress in superconducting devices for quantum information has highlighted the need to mitigate sources of qubit decoherence, driving a renewed interest in understanding the underlying noise mechanism(s). Though a consensus has emerged attributing flux noise to surface spins, their identity and interaction mechanisms remain unclear, prompting further study. Here we apply weak in-plane magnetic fields to a capacitively-shunted flux qubit (where the Zeeman splitting of surface spins lies below the device temperature) and study the flux-noise-limited qubit dephasing, revealing previously unexplored trends that may shed light on the dynamics behind the emergent $1/f$ noise. Notably, we observe an enhancement (suppression) of the spin-echo (Ramsey) pure dephasing time in fields up to $B=100~\text{G}$. With direct noise spectroscopy, we further observe a transition from a $1/f$ to approximately Lorentzian frequency dependence below 10 Hz and a reduction of the noise above 1 MHz with increasing magnetic field. We suggest that these trends are qualitatively consistent with an increase of spin cluster sizes with magnetic field. These results should help to inform a complete microscopic theory of $1/f$ flux noise in superconducting circuits

High-Fidelity, Frequency-Flexible Two-Qubit Fluxonium Gates with a Transmon Coupler

We propose and demonstrate an architecture for fluxonium-fluxonium two-qubit gates mediated by transmon couplers (FTF, for fluxonium-transmon-fluxonium). Relative to architectures that exclusively rely on a direct coupling between fluxonium qubits, FTF enables stronger couplings for gates using non-computational states while simultaneously suppressing the static controlled-phase entangling rate ($ZZ$) down to kHz levels, all without requiring strict parameter matching. Here we implement FTF with a flux-tunable transmon coupler and demonstrate a microwave-activated controlled-Z (CZ) gate whose operation frequency can be tuned over a 2 GHz range, adding frequency allocation freedom for FTF's in larger systems. Across this range, state-of-the-art CZ gate fidelities were observed over many bias points and reproduced across the two devices characterized in this work. After optimizing both the operation frequency and the gate duration, we achieved peak CZ fidelities in the 99.85-99.9\% range. Finally, we implemented model-free reinforcement learning of the pulse parameters to boost the mean gate fidelity up to $99.922\pm0.009\%$, averaged over roughly an hour between scheduled training runs. Beyond the microwave-activated CZ gate we present here, FTF can be applied to a variety of other fluxonium gate schemes to improve gate fidelities and passively reduce unwanted $ZZ$ interactions.Comment: 23 pages, 16 figure

PDXNet portal: patient-derived Xenograft model, data, workflow and tool discovery.

We created the PDX Network (PDXNet) portal (https://portal.pdxnetwork.org/) to centralize access to the National Cancer Institute-funded PDXNet consortium resources, to facilitate collaboration among researchers and to make these data easily available for research. The portal includes sections for resources, analysis results, metrics for PDXNet activities, data processing protocols and training materials for processing PDX data. Currently, the portal contains PDXNet model information and data resources from 334 new models across 33 cancer types. Tissue samples of these models were deposited in the NCI\u27s Patient-Derived Model Repository (PDMR) for public access. These models have 2134 associated sequencing files from 873 samples across 308 patients, which are hosted on the Cancer Genomics Cloud powered by Seven Bridges and the NCI Cancer Data Service for long-term storage and access with dbGaP permissions. The portal includes results from freely available, robust, validated and standardized analysis workflows on PDXNet sequencing files and PDMR data (3857 samples from 629 patients across 85 disease types). The PDXNet portal is continuously updated with new data and is of significant utility to the cancer research community as it provides a centralized location for PDXNet resources, which support multi-agent treatment studies, determination of sensitivity and resistance mechanisms, and preclinical trials

Demonstration of tunable three-body interactions between superconducting qubits

Nonpairwise multi-qubit interactions present a useful resource for quantum information processors. Their implementation would facilitate more efficient quantum simulations of molecules and combinatorial optimization problems, and they could simplify error suppression and error correction schemes. Here we present a superconducting circuit architecture in which a coupling module mediates 2-local and 3-local interactions between three flux qubits by design. The system Hamiltonian is estimated via multi-qubit pulse sequences that implement Ramsey-type interferometry between all neighboring excitation manifolds in the system. The 3-local interaction is coherently tunable over several MHz via the coupler flux biases and can be turned off, which is important for applications in quantum annealing, analog quantum simulation, and gate-model quantum computation.Comment: 14 pages, 11 figure

Supervising the Supervisors—Procedural Training and Supervision in Internal Medicine Residency

At teaching hospitals, bedside procedures (paracentesis, thoracentesis, lumbar puncture, arthrocentesis and central venous catheter insertion) are performed by junior residents and supervised by senior peers. Residents’ perceptions about supervision or how often peer supervision produces unsafe clinical situations are unknown. To examine the experience and practice patterns of residents performing bedside procedures. Cross-sectional e-mail survey of 653 internal medicine (IM) residents at seven California teaching hospitals. Surveys asked questions in three areas: (1) resident experience performing procedures: numbers of procedures performed and whether they received other (e.g., simulator) training; (2) resident comfort performing and supervising procedures; (3) resident reports of their current level of supervision doing procedures, experience with complications as well as perceptions of factors that may have contributed to complications. Three hundred sixty-seven (56%) of the residents responded. Most PGY1 residents had performed fewer than five of any of the procedures, but most PGY-3 residents had performed at least ten by the end of their training. Resident comfort for each procedure increased with the number of procedures performed (p < 0.001). Although residents reported that peer supervision happened often, they also reported high rates of supervising a procedure before feeling comfortable with proper technique. The majority of residents (64%) reported at least one complication and did not feel supervision would have prevented complications, even though many reported complications represented technique- or preparation-related problems. Residents report low levels of comfort and experience with procedures, and frequently report supervising prior to feeling comfortable. Our findings suggest a need to examine best practices for procedural supervision of trainees