238 research outputs found
Calcium sensitivity and the Frank-Starling mechanism of the heart are increased in titin N2B region deficient mice
Previous work suggests that titin-based passive tension is a factor in the Frank-Starling mechanism of the heart, by increasing length-dependent activation (LDA) through an increase in calcium sensitivity at long sarcomere length. We tested this hypothesis in a mouse model (N2B KO model) in which titin-based passive tension is elevated as a result of the excision of the N2B element, one of cardiac titin's spring elements. LDA was assessed by measuring the active tension-pCa (-log[Ca2+]) relationship at sarcomere length (SLs) of 1.95, 2.10 and 2.30mum in WT and N2B KO skinned myocardium. LDA was positively correlated with titin-based passive tension, due to an increase in calcium sensitivity at the longer SLs in the KO. For example, at pCa 6.0 the KO:WT tension ratio was 1.28+/-0.07 and 1.42+/-0.04 at SLs of 2.1 and 2.3mum, respectively. There was no difference in protein expression or phosphorylation of sarcomeric proteins. We also measured the calcium sensitivity after PKA treating the skinned muscle and found that titin-based passive tension was also now correlated with LDA, with a slope that was significantly increased compared to no PKA treatment. Finally, we performed isolated heart experiments and measured the Frank-Starling relation (slope of developed wall stress-LV volume relation) as well as diastolic stiffness (slope of diastolic wall stress - volume relation). The FSM was more pronounced in the N2B KO hearts and the slope of the FSM correlated with diastolic stiffness. These findings support that titin-based passive tension triggers an increase in calcium sensitivity at long sarcomere length, thereby playing an important role in the Frank-Starling mechanism of the heart
Strain Modulated Superlattices in Graphene
Strain engineering of graphene takes advantage of one of the most dramatic
responses of Dirac electrons enabling their manipulation via strain-induced
pseudo-magnetic fields. Numerous theoretically proposed devices, such as
resonant cavities and valley filters, as well as novel phenomena, such as snake
states, could potentially be enabled via this effect. These proposals, however,
require strong, spatially oscillating magnetic fields while to date only the
generation and effects of pseudo-gauge fields which vary at a length scale much
larger than the magnetic length have been reported. Here we create a periodic
pseudo-gauge field profile using periodic strain that varies at the length
scale comparable to the magnetic length and study its effects on Dirac
electrons. A periodic strain profile is achieved by pulling on graphene with
extreme (>10%) strain and forming nanoscale ripples, akin to a plastic wrap
pulled taut at its edges. Combining scanning tunneling microscopy and atomistic
calculations, we find that spatially oscillating strain results in a new
quantization different from the familiar Landau quantization observed in
previous studies. We also find that graphene ripples are characterized by large
variations in carbon-carbon bond length, directly impacting the electronic
coupling between atoms, which within a single ripple can be as different as in
two different materials. The result is a single graphene sheet that effectively
acts as an electronic superlattice. Our results thus also establish a novel
approach to synthesize an effective 2D lateral heterostructure - by periodic
modulation of lattice strain.Comment: 18 pages, 5 figures and supplementary informatio
Deleting titin's C-terminal PEVK exons increases passive stiffness, alters splicing, and induces cross-sectional and longitudinal hypertrophy in skeletal muscle
The Proline, Glutamate, Valine and Lysine-rich (PEVK) region of titin constitutes an entropic spring that provides passive tension to striated muscle. To study the functional and structural repercussions of a small reduction in the size of the PEVK region, we investigated skeletal muscles of a mouse with the constitutively expressed C-terminal PEVK exons 219β225 deleted, the Ttn(Ξ219β225) model (MGI: Ttn(TM 2.1Mgot)). Based on this deletion, passive tension in skeletal muscle was predicted to be increased by βΌ17% (sarcomere length 3.0 ΞΌm). In contrast, measured passive tension (sarcomere length 3.0 ΞΌm) in both soleus and EDL muscles was increased 53 Β± 11% and 62 Β± 4%, respectively. This unexpected increase was due to changes in titin, not to alterations in the extracellular matrix, and is likely caused by co-expression of two titin isoforms in Ttn(Ξ219β225) muscles: a larger isoform that represents the Ttn(Ξ219β225) N2A titin and a smaller isoform, referred to as N2A2. N2A2 represents a splicing adaption with reduced expression of spring element exons, as determined by titin exon microarray analysis. Maximal tetanic tension was increased in Ttn(Ξ219β225) soleus muscle (WT 240 Β± 9; Ttn(Ξ219β225) 276 Β± 17 mN/mm2), but was reduced in EDL muscle (WT 315 Β± 9; Ttn(Ξ219β225) 280 Β± 14 mN/mm2). The changes in active tension coincided with a switch toward slow fiber types and, unexpectedly, faster kinetics of tension generation and relaxation. Functional overload (FO; ablation) and hindlimb suspension (HS; unloading) experiments were also conducted. Ttn(Ξ219β225) mice showed increases in both longitudinal hypertrophy (increased number of sarcomeres in series) and cross-sectional hypertrophy (increased number of sarcomeres in parallel) in response to FO and attenuated cross-sectional atrophy in response to HS. In summary, slow- and fast-twitch muscles in a mouse model devoid of titin's PEVK exons 219β225 have high passive tension, due in part to alterations elsewhere in splicing of titinβs spring region, increased kinetics of tension generation and relaxation, and altered trophic responses to both functional overload and unloading. This implicates titinβs C-terminal PEVK region in regulating passive and active muscle mechanics and muscle plasticity
MSCDA: Multi-level Semantic-guided Contrast Improves Unsupervised Domain Adaptation for Breast MRI Segmentation in Small Datasets
Deep learning (DL) applied to breast tissue segmentation in magnetic
resonance imaging (MRI) has received increased attention in the last decade,
however, the domain shift which arises from different vendors, acquisition
protocols, and biological heterogeneity, remains an important but challenging
obstacle on the path towards clinical implementation. In this paper, we propose
a novel Multi-level Semantic-guided Contrastive Domain Adaptation (MSCDA)
framework to address this issue in an unsupervised manner. Our approach
incorporates self-training with contrastive learning to align feature
representations between domains. In particular, we extend the contrastive loss
by incorporating pixel-to-pixel, pixel-to-centroid, and centroid-to-centroid
contrasts to better exploit the underlying semantic information of the image at
different levels. To resolve the data imbalance problem, we utilize a
category-wise cross-domain sampling strategy to sample anchors from target
images and build a hybrid memory bank to store samples from source images. We
have validated MSCDA with a challenging task of cross-domain breast MRI
segmentation between datasets of healthy volunteers and invasive breast cancer
patients. Extensive experiments show that MSCDA effectively improves the
model's feature alignment capabilities between domains, outperforming
state-of-the-art methods. Furthermore, the framework is shown to be
label-efficient, achieving good performance with a smaller source dataset. The
code is publicly available at \url{https://github.com/ShengKuangCN/MSCDA}.Comment: 17 pages, 8 figure
Exploration of pathomechanisms triggered by a single-nucleotide polymorphism in titin\u27s I-band: the cardiomyopathy-linked mutation T2580I
Missense single-nucleotide polymorphisms (mSNPs) in titin are emerging as a main causative factor of heart failure. However, distinguishing between benign and disease-causing mSNPs is a substantial challenge. Here, we research the question of whether a single mSNP in a generic domain of titin can affect heart function as a whole and, if so, how. For this, we studied the mSNP T2850I, seemingly linked to arrhythmogenic right ventricular cardiomyopathy (ARVC). We used structural biology, computational simulations and transgenic muscle in vivo methods to track the effect of the mutation from the molecular to the organismal level. The data show that the T2850I exchange is compatible with the domain three-dimensional fold, but that it strongly destabilizes it. Further, it induces a change in the conformational dynamics of the titin chain that alters its reactivity, causing the formation of aberrant interactions in the sarcomere. Echocardiography of knock-in mice indicated a mild diastolic dysfunction arising from increased myocardial stiffness. In conclusion, our data provide evidence that single mSNPs in titin\u27s I-band can alter overall muscle behaviour. Our suggested mechanisms of disease are the development of non-native sarcomeric interactions and titin instability leading to a reduced I-band compliance. However, understanding the T2850I-induced ARVC pathology mechanistically remains a complex problem and will require a deeper understanding of the sarcomeric context of the titin region affected
Chromatic Illumination Discrimination Ability Reveals that Human Colour Constancy Is Optimised for Blue Daylight Illuminations
The phenomenon of colour constancy in human visual perception keeps surface colours constant, despite changes in their reflected light due to changing illumination. Although colour constancy has evolved under a constrained subset of illuminations, it is unknown whether its underlying mechanisms, thought to involve multiple components from retina to cortex, are optimised for particular environmental variations. Here we demonstrate a new method for investigating colour constancy using illumination matching in real scenes which, unlike previous methods using surface matching and simulated scenes, allows testing of multiple, real illuminations. We use real scenes consisting of solid familiar or unfamiliar objects against uniform or variegated backgrounds and compare discrimination performance for typical illuminations from the daylight chromaticity locus (approximately blue-yellow) and atypical spectra from an orthogonal locus (approximately red-green, at correlated colour temperature 6700 K), all produced in real time by a 10-channel LED illuminator. We find that discrimination of illumination changes is poorer along the daylight locus than the atypical locus, and is poorest particularly for bluer illumination changes, demonstrating conversely that surface colour constancy is best for blue daylight illuminations. Illumination discrimination is also enhanced, and therefore colour constancy diminished, for uniform backgrounds, irrespective of the object type. These results are not explained by statistical properties of the scene signal changes at the retinal level. We conclude that high-level mechanisms of colour constancy are biased for the blue daylight illuminations and variegated backgrounds to which the human visual system has typically been exposed
Genetics of Mechanosensation in the Heart
Mechanosensation (the ultimate conversion of a mechanical stimulus into a biochemical signal) as well as mechanotransduction (transmission of mechanically induced signals) belong to the most fundamental processes in biology. These effects, because of their dynamic nature, are particularly important for the cardiovascular system. Therefore, it is not surprising that defects in cardiac mechanosensation, are associated with various types of cardiomyopathy and heart failure. However, our current knowledge regarding the genetic basis of impaired mechanosensation in the cardiovascular system is beginning to shed light on this subject and is at the centre of this brief review
Impairments in contractility and cytoskeletal organisation cause nuclear defects in nemaline myopathy
Nemaline myopathy (NM) is a skeletal muscle disorder caused by mutations in genes that are generally involved in muscle contraction, in particular those related to the structure and/or regulation of the thin filament. Many pathogenic aspects of this disease remain largely unclear. Here, we report novel pathological defects in skeletal muscle fibres of mouse models and patients with NM: irregular spacing and morphology of nuclei; disrupted nuclear envelope; altered chromatin arrangement; and disorganisation of the cortical cytoskeleton. Impairments in contractility are the primary cause of these nuclear defects. We also establish the role of microtubule organisation in determining nuclear morphology, a phenomenon which is likely to contribute to nuclear alterations in this disease. Our results overlap with findings in diseases caused directly by mutations in nuclear envelope or cytoskeletal proteins. Given the important role of nuclear shape and envelope in regulating gene expression, and the cytoskeleton in maintaining muscle fibre integrity, our findings are likely to explain some of the hallmarks of NM, including contractile filament disarray, altered mechanical properties and broad transcriptional alterations
Low levels of specularity support operational color constancy, particularly when surface and illumination geometry can be inferred
We tested whether surface specularity alone supports operational color constancyβthe ability to discriminate changes in illumination or reflectance. Observers viewed short animations of illuminant or reflectance changes in rendered scenes containing a single spherical surface and were asked to classify the change. Performance improved with increasing specularity, as predicted from regularities in chromatic statistics. Peak performance was impaired by spatial rearrangements of image pixels that disrupted the perception of illuminated surfaces but was maintained with increased surface complexity. The characteristic chromatic transformations that are available with nonzero specularity are useful for operational color constancy, particularly if accompanied by appropriate perceptual organization
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