The SDSS Damped Lya Survey: Data Release 1

We present the results from an automated search for damped Lya (DLA) systems in the quasar spectra of Data Release 1 from the Sloan Digital Sky Survey (SDSS-DR1). At z~2.5, this homogeneous dataset has greater statistical significance than the previous two decades of research. We derive a statistical sample of 71 damped Lya systems (>50 previously unpublished) at z>2.1 and measure HI column densities directly from the SDSS spectra. The number of DLA systems per unit redshift is consistent with previous measurements and we expect our survey has >95% completeness. We examine the cosmological baryonic mass density of neutral gas Omega_g inferred from the damped Lya systems from the SDSS-DR1 survey and a combined sample drawn from the literature. Contrary to previous results, the Omega_g values do not require a significant correction from Lyman limit systems at any redshift. We also find that the Omega_g values for the SDSS-DR1 sample do not decline at high redshift and the combined sample shows a (statistically insignificant) decrease only at z>4. Future data releases from SDSS will provide the definitive survey of DLA systems at z~2.5 and will significantly reduce the uncertainty in Omega_g at higher redshift.Comment: 12 pages, includes color figures. Accepted to PASP, April 20 200

Developing collaborative partnerships with culturally and linguistically diverse families during the IEP process

Family participation in the special education process has been federally mandated for 40 years, and educators recognize that effective collaboration with their students’ families leads to improved academic and social outcomes for students. However, while some family-school relationships are positive and collaborative, many are not, particularly for culturally and linguistically diverse (CLD) families. This article provides practice guidelines based in research for teachers who seek to improve their practices when working with CLD families who have children served by special education

Bimodality in Damped Lyman alpha Systems

We report evidence for a bimodality in damped Ly systems (DLAs). Using [C II] 158 mu cooling rates, lc, we find a distribution with peaks at lc=10^-27.4 and 10^-26.6 ergs s^-1 H^-1 separated by a trough at lc^crit ~= lc < 10^-27.0 ergs s^-1 H^-1. We divide the sample into low cool DLAs with lc < lc^crit and high cool DLAs with lc > lc^crit and find the Kolmogorv-Smirnov probabilities that velocity width, metallicity, dust-to-gas ratio, and Si II equivalent width in the two subsamples are drawn from the same parent population are small. All these quantities are significantly larger in the high cool population, while the H I column densities are indistinguishable in the two populations. We find that heating by X-ray and FUV background radiation is insufficient to balance the cooling rates of either population. Rather, the DLA gas is heated by local radiation fields. The rare appearance of faint, extended objects in the Hubble Ultra Deep Field rules out in situ star formation as the dominant star-formation mode for the high cool population, but is compatible with in situ star formation as the dominant mode for the low cool population. Star formation in the high cool DLAs likely arises in Lyman Break galaxies. We investigate whether these properties of DLAs are analogous to the bimodal properties of nearby galaxies. Using Si II equivalent width as a mass indicator, we construct bivariate distributions of metallicity, lc, and areal SFR versus the mass indicators. Tentative evidence is found for correlations and parallel sequences, which suggest similarities between DLAs and nearby galaxies. We suggest that the transition-mass model provides a plausible scenario for the bimodality we have found. As a result, the bimodality in current galaxies may have originated in DLAs.Comment: Accepted for publication in the Astrophysical Journal 18 pages 14 figure

Survey for Galaxies Associated with z~3 Damped Lyman alpha Systems I: Spectroscopic Calibration of u'BVRI Photometric Selection

We present a survey for z~3 Lyman break galaxies (LBGs) associated with damped Lyman alpha systems (DLAs) with the primary purpose of determining the DLA-LBG cross-correlation. This paper describes the acquisition and analysis of imaging and spectroscopic data of 9 quasar fields having 11 known z~3 DLAs covering an area of 465 arcmin^2. Using deep u'BVRI images, 796 LBG candidates to an apparent R_AB magnitude of 25.5 were photometrically selected from 17,343 sources detected in the field. Spectroscopic observations of 529 LBG candidates using Keck LRIS yielded 339 redshifts. We have conservatively identified 211 z>2 objects with =3.02+/-0.32. We discuss our method of z~3 LBG identification and present a model of the u'BVRI photometric selection function. We use the 339 spectra to evaluate our u'BVRI z~3 Lyman break photometric selection technique.Comment: 26 pages, 6 tables, 11 figures, accepted for publication in Ap

CII* Absorption in Damped Lyman Alpha Systems: (II) A New Window on the Star Formation History of the Universe

Starting from the SFR per unit physical area, determined for DLAs using the C II* method, we obtain the SFR per unit comoving volume at $z$ $\approx$ 3, and find that it agrees with that for the Lyman Break Galaxies (LBGs). Though the mass of produced stars indicated by the SFRs is consistent with the current densities of known stellar populations, the mass of metals produced by $z$=2.5 is 30 times larger than detected in absorption in DLAs. The most likely solutions to this ``missing metals'' problem is that star formation occurs in compact bulge regions. We search for evidence of feedback and find no correlations between the SFR per unit area and N(H I), but possible correlations between SFR per unit area and low-ion velocity width and SFR per unit area and metal abundance. We show that (a) the correlation between cooling rate and dust-to-gas ratio is positive evidence for grain photoelectric heating, (b) the CMB does not significantly populate the C II excited fine-structure states, and (c) the ratio of CII* to resonance-line optical depths is a sensitive probe of the multi-phase structure of the DLA gas. We address recent arguments that DLAs are comprised only of WNM gas, and show them to be inconclusive. Despite the rough agreement between SFR per unit comoving volume for DLAs and LBGs, current evidence indicates these are distinct populations

Vertex similarity in networks

We consider methods for quantifying the similarity of vertices in networks. We propose a measure of similarity based on the concept that two vertices are similar if their immediate neighbors in the network are themselves similar. This leads to a self-consistent matrix formulation of similarity that can be evaluated iteratively using only a knowledge of the adjacency matrix of the network. We test our similarity measure on computer-generated networks for which the expected results are known, and on a number of real-world networks

The kinetic temperature in a damped Lyman-alpha absorption system in Q2206-199 - an example of the warm neutral medium

By comparing the widths of absorption lines from OI, SiII and FeII in the redshift z=2.076 single-component damped Lyman alpha absorption system in the spectrum of Q2206-199 we establish that these absorption lines arise in Warm Neutral Medium gas at ~12000 +/- 3000K. This is consistent with thermal equilibrium model estimates of ~ 8000K for the Warm Neutral Medium in galaxies, but not with the presence of a significant cold component. It is also consistent with, but not required by, the absence of CII* fine structure absorption in this system. Some possible implications concerning abundance estimates in narrow-line WNM absorbers are discussed.Comment: 9 pages, 3 figures. MNRAS accepte

Plasmas in Saturn's magnetosphere

The solar wind plasma analyzer on board Pioneer 2 provides first observations of low-energy positive ions in the magnetosphere of Saturn. Measurable intensities of ions within the energy-per-unit charge (E/Q) range 100 eV to 8 keV are present over the planetocentric radial distance range about 4 to 16 R sub S in the dayside magnetosphere. The plasmas are found to be rigidly corotating with the planet out to distances of at least 10 R sub S. At radial distances beyond 10 R sub S, the bulk flows appear to be in the corotation direction but with lesser speeds than those expected from rigid corotation. At radial distances beyond the orbit of Rhea at 8.8 R sub S, the dominant ions are most likely protons and the corresponding typical densities and temperatures are 0.5/cu cm and 1,000,000 K, respectively, with substantial fluctuations. It is concluded that the most likely source of these plasmas in the photodissociation of water frost on the surface of the ring material with subsequent ionization of the products and radially outward diffusion. The presence of this plasma torus is expected to have a large influence on the dynamics of Saturn's magnetosphere since the pressure ratio beta of these plasmas approaches unity at radial distances as close to the planet as 6.5 R sub S. On the basis of these observational evidences it is anticipated that quasi-periodic outward flows of plasma, accompanied with a reconfiguration of the magnetosphere beyond about 6.5 R sub S, will occur in the local night sector in order to relieve the plasma pressure from accretion of plasma from the rings

Maximizing phonon thermal conductance for ballistic membranes

At low temperatures, phonon scattering can become so weak that phonon transport becomes ballistic. We calculate the ballistic phonon conductance G for membranes using elasticity theory, considering the transition from three to two dimensions. We discuss the temperature and thickness dependence and especially concentrate on the issue of material parameters. For all membrane thicknesses, the best conductors have, counter-intuitively, the lowest speed of sound.Comment: 4 pages, 4 figures, proceedings to phonons 2007 conferenc

Sequence and analysis of the genome of the pathogenic yeast Candida orthopsilosis

Candida orthopsilosis is closely related to the fungal pathogen Candida parapsilosis. However, whereas C. parapsilosis is a major cause of disease in immunosuppressed individuals and in premature neonates, C. orthopsilosis is more rarely associated with infection. We sequenced the C. orthopsilosis genome to facilitate the identification of genes associated with virulence. Here, we report the de novo assembly and annotation of the genome of a Type 2 isolate of C. orthopsilosis. The sequence was obtained by combining data from next generation sequencing (454 Life Sciences and Illumina) with paired-end Sanger reads from a fosmid library. The final assembly contains 12.6 Mb on 8 chromosomes. The genome was annotated using an automated pipeline based on comparative analysis of genomes of Candida species, together with manual identification of introns. We identified 5700 protein-coding genes in C. orthopsilosis, of which 5570 have an ortholog in C. parapsilosis. The time of divergence between C. orthopsilosis and C. parapsilosis is estimated to be twice as great as that between Candida albicans and Candida dubliniensis. There has been an expansion of the Hyr/Iff family of cell wall genes and the JEN family of monocarboxylic transporters in C. parapsilosis relative to C. orthopsilosis. We identified one gene from a Maltose/Galactoside O-acetyltransferase family that originated by horizontal gene transfer from a bacterium to the common ancestor of C. orthopsilosis and C. parapsilosis. We report that TFB3, a component of the general transcription factor TFIIH, undergoes alternative splicing by intron retention in multiple Candida species. We also show that an intein in the vacuolar ATPase gene VMA1 is present in C. orthopsilosis but not C. parapsilosis, and has a patchy distribution in Candida species. Our results suggest that the difference in virulence between C. parapsilosis and C. orthopsilosis may be associated with expansion of gene families