Pyramiding resistance genes and widening the genetic base of the apple (Malus 7 domestica Borkh.) crop

Apple breeding is active worldwide and yet the apple crop is in a precarious state as it relies on few dominant cultivars and only the Rvi6 (formerly Vf) gene, that confers resistance to scab, has been extensively exploited in the cultivars entered the market in recent years. However, there are some 20 disease resistance genes described in apple and the apple germplasm includes thousands of accessions in the repositories. In this paper, a breeding programme is described, whereby 36 genotypes, including ancient and contemporary apple cultivars, were crossed to produce a new set of selections that combine extensive genetic resources with pyramided resistance genes to several apple diseases, such as scab and powdery mildew. The 110 cross combinations carried out successfully, of the 260 initially planned, produced 7,876 offsprings, reduced to 2,969 after screening with molecular markers associated with five resistance genes. Selections with three or two resistance genes and good agronomic characteristics were kept for further field observations with the aims of creating new cultivars for the market and new parents for future breeding projects

Targeted mutagenesis of the female-suppressor sygi gene in tetraploid kiwifruit by crispr/cas9

Kiwifruit belong to the genus Actinidia with 54 species apparently all functionally dioecious. The sex-determinants of the type XX/XY, with male heterogametic, operate independently of the ploidy level. Recently, the SyGI protein has been described as the suppressor of female development. In the present study, we exploited the CRISPR/Cas9 technology by targeting two different sites in the SyGI gene in order to induce a stable gene knock-out in two tetraploid male accessions of Actinidia chinensis var. chinensis. The two genotypes showed a regenerative efficiency of 58% and 73%, respectively. Despite not yet being able to verify the phenotypic effects on the flower structure, due to the long time required by tissue-cultured kiwifruit plants to flower, we obtained two regenerated lines showing near fixation of a unique modification in their genome, resulting in both cases in the onset of a premature stop codon, which induces the putative gene knock-out. Evaluation of gRNA1 locus for both regenerated plantlets resulted in co-amplification of a minor variant differing from the target region for a single nucleotide. A genomic duplication of the region in proximity of the Y genomic region could be postulated

Grapevine fingerprinting using microsatellite repeats

Five different microsatellite loci have been amplified through PCR (Polymerase Chain Reaction) in order to find polymorphisms useful for identification of 16 cvs and 42 clones or populations of Vitis vinifera L. No genetic variability was detected among clones and populations. Ail the cultivars have been identified, except those derived from bud mutations involving the colour of the berries, as the Pinot group (P. noir, P. blanc, P. gris), or those thought to be closely correlated or synonymous, such as 'Refosco di Faedis' and 'Refoscone'. One locus (VVS2) showed a high polymorphism with 12 alleles detected on high resolution agarose gel

Investigating the effect of selective logging on tree biodiversity and structure of the tropical forests of Papua New Guinea

Abstract: Unsustainable exploitation of tropical forest resources is raising worldwide concern. In Papua New Guinea (PNG) timber harvesting has been identified as a major contributor to deforestation and forest degradation but its impact on biodiversity is still poorly understood. In this study we investigated the effect of selective logging on tree taxonomic composition, structure and diversity of PNG forests. We used data from 101 one-hectare permanent sample plots (PSPs) belonging to two vegetation types: low altitude forests on plains and fans (type P) and low altitude forests on uplands (type H). We used multivariate techniques to test for significant differences in species composition between plots of different vegetation types and disturbance regimes, identifying the tree taxa to which these differences could be ascribed. ANOVA was used to test for differences between logged-over and unlogged forest PSPs with respect to biodiversity (richness, Shannon's diversity, Pielou's evenness) and stand structure (stem density, basal area - BA). Temporal trends of forest features were analyzed using linear regression. Significant differences in taxonomic composition were found between logged-over and unlogged plots of the H type (p = 0.04). No differences were found in richness, diversity and evenness between logged-over and unlogged forest plots, while stem density was higher in the latter (421 ± 153 stems ha-1). Greater BA was found in unlogged forests (30.28 ± 4.45 m2 ha-1) of the H type when compared to the logged-over stands (15.52 ± 4.04 m2 ha-1). We detected positive trends in richness (0.55 ± 0.19 taxa ha-1 yr-1) and diversity after logging. Furthermore, H type forest exhibited positive trends in stem density (9 ± 1 stems ha-1 yr-1) and BA (0.42 ± 0.06 m2 ha-1 yr-1) with elapsed time since harvesting. Our analysis highlights some significant effects of logging activities on biodiversity and structure of PNG forests. Additionally, forests exhibited a significant recovery with respect to richness, diversity and stand structure. These preliminary results will be compared with data collected by the forthcoming National Forest Inventory in order to assess and monitor the effects of human activities and ecological factors on PNG forest biodiversity and develop appropriate conservation measures and sustainable management strategies

Incorporation of the fasting plasma FFA concentration into QUICKI improves its association with insulin sensitivity in nonobese individuals

Insulin resistance plays a major role in the pathophysiology of diabetes and is associated with obesity and cardiovascular disease. Excellent methods exist for the assessment of insulin sensitivity in the laboratory setting, such as the glucose clamp. However, these methods are not suitable for large population studies, and, thus, surrogate estimates of insulin sensitivity based on measurements in a single blood sample have been developed. Recently an index based on the logarithm and the reciprocal of the insulin-glucose product (QUICKI) has been proposed. QUICKI correlated with insulin sensitivity across the entire spectrum of glucose tolerance, but its performance was less satisfactory in normal subjects. Aim of this study was to ascertain whether the inclusion of fasting plasma free fatty acids concentration into QUICKI improves its association with insulin sensitivity in nonobese subjects. To test this hypothesis, we performed a euglycemic hyperinsulinemic clamp [40 mU/(m(2).min)] in 57 young, healthy, nonobese individuals with (n = 17) or without (n = 40) first-degree relatives affected by type 2 diabetes (the former group being an in vivo model of mild insulin resistance). We then compared the clamp-based index of insulin sensitivity with both QUICKI and a revised QUICKI, the latter index including the contribution of fasting free fatty acid concentration as well. The revised QUICKI considerably improved the relationship with the clamp-based index of insulin sensitivity (r = 0.51, P < 0.0001) with respect to QUICKI (r = 0.27, P < 0.05). In addition, the revised QUICKI revealed a reduction of insulin sensitivity in the offspring of type 2 diabetes (10%; P < 0.006) that QUICKI was unable to detect (3%; P = 0.28). In conclusion, this study suggests that the incorporation of fasting free fatty acid level into QUICKI is useful to improve its correlation with the clamp-based index of insulin sensitivity and its discriminatory power in case of mild insulin resistance. Further investigation is needed to ascertain its applicability to patients with obesity and type 2 diabetes

Quality of Living Perceived of the Young People of the Vale do Sinos / RS/Brazil

The objective of this study was to identify the Quality of Life level of young people from Vale do Sinos / RS. The methodology was observational, descriptive and transversal. The sample had 391 young people. The data collection instruments were the WHOQOL-Bref and a socioeconomic questionnaire. Resulting in a total average score of 52.37 points, the highest for the Social Relations Domain and the lowest for the Environment. When compared to the variables "Sex", "Income" and "Age", the one with the highest statistically significant association among the domains was "Income", followed by "Sex" and "Age". It was concluded that the QoL of young people is smaller when compared with other studies, being relevant investments in public policies

Body composition in Italian and Danish women

Summary The objective of this cross-sectional study was to compare the body composition and fat distribution measured by dual energy X-ray absorptiometry (DPX, Lunar) in different age decades of agematched Danish and Italian women. The subjects comprised 133 healthy Italian women (age 20± 60 years) age-matched to a representative sub-sample of healthy Danish women (n 375). Total and abdominal body fat tissue mass were measured by dual-energy X-ray absorptiometry. Italian women were shorter and fatter compared with age-matched Danish women, but in middle-age, had a less abdominal fat distribution. There was no difference in total body bone mineral density