Facilitated diffusion on confined DNA

In living cells, proteins combine 3D bulk diffusion and 1D sliding along the DNA to reach a target faster. This process is known as facilitated diffusion, and we investigate its dynamics in the physiologically relevant case of confined DNA. The confining geometry and DNA elasticity are key parameters: we find that facilitated diffusion is most efficient inside an isotropic volume, and on a flexible polymer. By considering the typical copy numbers of proteins in vivo, we show that the speedup due to sliding becomes insensitive to fine tuning of parameters, rendering facilitated diffusion a robust mechanism to speed up intracellular diffusion-limited reactions. The parameter range we focus on is relevant for in vitro systems and for facilitated diffusion on yeast chromatin

Colloids in active fluids: Anomalous micro-rheology and negative drag

We simulate an experiment in which a colloidal probe is pulled through an active nematic fluid. We find that the drag on the particle is non-Stokesian (not proportional to its radius). Strikingly, a large enough particle in contractile fluid (such as an actomyosin gel) can show negative viscous drag in steady state: the particle moves in the opposite direction to the externally applied force. We explain this, and the qualitative trends seen in our simulations, in terms of the disruption of orientational order around the probe particle and the resulting modifications to the active stress.Comment: 5 pages, 3 figure

Bulk rheology and microrheology of active fluids

We simulate macroscopic shear experiments in active nematics and compare them with microrheology simulations where a spherical probe particle is dragged through an active fluid. In both cases we define an effective viscosity: in the case of bulk shear simulations this is the ratio between shear stress and shear rate, whereas in the microrheology case it involves the ratio between the friction coefficient and the particle size. We show that this effective viscosity, rather than being solely a property of the active fluid, is affected by the way chosen to measure it, and strongly depends on details such as the anchoring conditions at the probe surface and on both the system size and the size of the probe particle.Comment: 12 pages, 10 figure

MAGIC eyes to the extreme: testing the blazar emission models on EHBLs

Extreme high-energy peaked BL Lac objects (EHBLs) are blazars whose synchrotron emission peaks at exceptionally high energies, above few keV, in the hard X-ray regime. So far, only a handful of those objects has been detected at very high energy (VHE, E > 100 GeV) gamma rays by Imaging Atmospheric Cherenkov Telescopes. Very remarkably, VHE observations of some of these blazars (like 1ES 0229+200) have provided evidence of a VHE gamma-ray emission extending to several TeV, which is difficult to explain with standard, one-zone synchrotron self-Compton models usually applied to BL Lac objects. The MAGIC collaboration coordinated a multi-year, multi-wavelength observational campaign on ten targets. The MAGIC telescopes detected VHE gamma rays from four EHBLs. In this paper we focus on the source 1ES 1426+426 and its X-ray and VHE gamma-ray properties. The results of different models (synchrotron self-Compton, spine-layer, hadronic) reproducing the broadband spectral energy distribution are also presented.Comment: Proceedings of the 36th International Cosmic Ray Conference (ICRC2019), July 24th-August 1st, 2019. Madison, WI, U.S.

AGILE Observations of GRB 220101A: A "new Year's Burst" with an Exceptionally Huge Energy Release

We report the AGILE observations of GRB 220101A, which took place at the beginning of 2022 January 1 and was recognized as one of the most energetic gamma-ray bursts (GRBs) ever detected since their discovery. The AGILE satellite acquired interesting data concerning the prompt phase of this burst, providing an overall temporal and spectral description of the event in a wide energy range, from tens of kiloelectronvolts to tens of megaelectronvolts. Dividing the prompt emission into three main intervals, we notice an interesting spectral evolution, featuring a notable hardening of the spectrum in the central part of the burst. The average fluxes encountered in the different time intervals are relatively moderate, with respect to those of other remarkable bursts, and the overall fluence exhibits a quite ordinary value among the GRBs detected by MCAL. However, GRB 220101A is the second farthest event detected by AGILE, and the burst with the highest isotropic equivalent energy of the entire MCAL GRB sample, releasing Eiso = 2.54 × 1054 erg and exhibiting an isotropic luminosity of Liso = 2.34 × 1052 erg s−1 (both in the 400 keV–10 MeV energy range). We also analyzed the first 106 s of the afterglow phase, using the publicly available Swift-XRT data, carrying out a theoretical analysis of the afterglow, based on the forward shock model. We notice that GRB 220101A is with high probability surrounded by a wind-like density medium, and that the energy carried by the initial shock shall be a fraction of the total Eiso, presumably near ∼50%.publishedVersio

AGILE gamma-ray detection of the exceptional GRB 221009A

Gamma-ray emission in the MeV-GeV range from explosive cosmic events is of invaluable relevance to understanding physical processes related to the formation of neutron stars and black holes. Here we report on the detection by the AGILE satellite in the MeV-GeV energy range of the remarkable long-duration gamma-ray burst GRB 221009A. The AGILE onboard detectors have good exposure to GRB 221009A during its initial crucial phases. Hard X-ray/MeV emission in the prompt phase lasted hundreds of seconds, with the brightest radiation being emitted between 200 and 300 seconds after the initial trigger. Very intense GeV gamma-ray emission is detected by AGILE in the prompt and early afterglow phase up to 10,000 seconds. Time-resolved spectral analysis shows time-variable MeV-peaked emission simultaneous with intense power-law GeV radiation that persists in the afterglow phase. The coexistence during the prompt phase of very intense MeV emission together with highly non-thermal and hardening GeV radiation is a remarkable feature of GRB 221009A. During the prompt phase, the event shows spectrally different MeV and GeV emissions that are most likely generated by physical mechanisms occurring in different locations. AGILE observations provide crucial flux and spectral gamma-ray information regarding the early phases of GRB 221009A during which emission in the TeV range was reported.Comment: Accepted for publication in ApJL on September 19, 202

The Blazar TXS 0506+056 Associated with a High-energy Neutrino: Insights into Extragalactic Jets and Cosmic-Ray Acceleration

A neutrino with energy ∼290 TeV, IceCube-170922A, was detected in coincidence with the BL Lac object TXS 0506+056 during enhanced gamma-ray activity, with chance coincidence being rejected at ∼3σ level. We monitored the object in the very-high-energy (VHE) band with the Major Atmospheric Gamma-ray Imaging Cherenkov (MAGIC) telescopes for ∼41 hr from 1.3 to 40.4 days after the neutrino detection. Day-timescale variability is clearly resolved. We interpret the quasi-simultaneous neutrino and broadband electromagnetic observations with a novel one-zone lepto-hadronic model, based on interactions of electrons and protons co-accelerated in the jet with external photons originating from a slow-moving plasma sheath surrounding the faster jet spine. We can reproduce the multiwavelength spectra of TXS 0506+056 with neutrino rate and energy compatible with IceCube-170922A, and with plausible values for the jet power of . The steep spectrum observed by MAGIC is concordant with internal γγ absorption above ∼100 GeV entailed by photohadronic production of a ∼290 TeV neutrino, corroborating a genuine connection between the multi-messenger signals. In contrast to previous predictions of predominantly hadronic emission from neutrino sources, the gamma-rays can be mostly ascribed to inverse Compton upscattering of external photons by accelerated electrons. The X-ray and VHE bands provide crucial constraints on the emission from both accelerated electrons and protons. We infer that the maximum energy of protons in the jet comoving frame can be in the range ∼1014 – 1018 eV.Peer Reviewe

A fast, very-high-energy γ -ray flare from BL Lacertae during a period of multi-wavelength activity in June 2015

The mechanisms producing fast variability of the γ-ray emission in active galactic nuclei (AGNs) are under debate. The MAGIC telescopes detected a fast, very-high-energy (VHE, E > 100 GeV) γ-ray flare from BL Lacertae on 2015 June 15. The flare had a maximum flux of (1.5 ± 0.3) × 10-10 photons cm-2 s-1 and halving time of 26 ± 8 min. The MAGIC observations were triggered by a high state in the optical and high-energy (HE, E > 100 MeV) γ-ray bands. In this paper we present the MAGIC VHE γ-ray data together with multi-wavelength data from radio, optical, X-rays, and HE γ rays from 2015 May 1 to July 31. Well-sampled multi-wavelength data allow us to study the variability in detail and compare it to the other epochs when fast, VHE γ-ray flares have been detected from this source. Interestingly, we find that the behaviour in radio, optical, X-rays, and HE γ-rays is very similar to two other observed VHE γ-ray flares. In particular, also during this flare there was an indication of rotation of the optical polarization angle and of activity at the 43 GHz core. These repeating patterns indicate a connection between the three events. We also test modelling of the spectral energy distribution based on constraints from the light curves and VLBA observations, with two different geometrical setups of two-zone inverse Compton models. In addition we model the γ-ray data with the star-jet interaction model. We find that all of the tested emission models are compatible with the fast VHE γ-ray flare, but all have some tension with the multi-wavelength observations

Periastron Observations of TeV Gamma-Ray Emission from a Binary System with a 50-year Period

We report on observations of the pulsar / Be star binary system PSR J2032+4127 / MT91 213 in the energy range between 100 GeV and 20 TeV with the VERITAS and MAGIC imaging atmospheric Cherenkov telescope arrays. The binary orbit has a period of approximately 50 years, with the most recent periastron occurring on 2017 November 13. Our observations span from 18 months prior to periastron to one month after. A new, point-like, gamma-ray source is detected, coincident with the location of PSR J2032+4127 / MT91 213. The gamma-ray light curve and spectrum are well-characterized over the periastron passage. The flux is variable over at least an order of magnitude, peaking at periastron, thus providing a firm association of the TeV source with the pulsar / Be star system. Observations prior to periastron show a cutoff in the spectrum at an energy around 0.5 TeV. This result adds a new member to the small population of known TeV binaries, and it identifies only the second source of this class in which the nature and properties of the compact object are firmly established. We compare the gamma-ray results with the light curve measured with the X-ray Telescope (XRT) on board the Neil Gehrels Swift Observatory and with the predictions of recent theoretical models of the system. We conclude that significant revision of the models is required to explain the details of the emission we have observed, and we discuss the relationship between the binary system and the overlapping steady extended source, TeV J2032+4130

Discovery of TeV γ-ray emission from the neighbourhood of the supernova remnant G24.7+0.6 by MAGIC

SNR G24.7+0.6 is a 9.5 kyrs radio and gamma-ray supernova remnant evolving in a dense medium. In the GeV regime, SNR G24.7+0.6 (3FHL J1834.1– 0706e/FGES J1834.1–0706) shows a hard spectral index (Γ∼2) up to 200 GeV, which makes it a good candidate to be observed with Cherenkov telescopes such as MAGIC. We observed the field of view of SNR G24.7+0.6 with the MAGIC telescopes for a total of 31 hours. We detect very high energy γ-ray emission from an extended source located 0.34 degree away from the center of the radio SNR. The new source, named MAGIC J1835–069 is detected up to 5 TeV, and its spectrum is well-represented by a power-law function with spectral index of 2.74 ± 0.08. The complexity of the region makes the identification of the origin of the very-high energy emission difficult, however the spectral agreement with the LAT source and overlapping position at less than 1.5 sigma point to a common origin. We analysed 8 years of Fermi-LAT data to extend the spectrum of the source down to 60 MeV. Fermi-LAT and MAGIC spectra overlap within errors and the global broad band spectrum is described by a power-law with exponential cutoff at 1.9 ± 0.5 TeV. The detected γ-ray emission can be interpreted as the results of proton-proton interaction between the supernova and the CO-rich surrounding