5,962 research outputs found

    Household epidemic models with varying infection response

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    This paper is concerned with SIR (susceptible →\to infected →\to removed) household epidemic models in which the infection response may be either mild or severe, with the type of response also affecting the infectiousness of an individual. Two different models are analysed. In the first model, the infection status of an individual is predetermined, perhaps due to partial immunity, and in the second, the infection status of an individual depends on the infection status of its infector and on whether the individual was infected by a within- or between-household contact. The first scenario may be modelled using a multitype household epidemic model, and the second scenario by a model we denote by the infector-dependent-severity household epidemic model. Large population results of the two models are derived, with the focus being on the distribution of the total numbers of mild and severe cases in a typical household, of any given size, in the event that the epidemic becomes established. The aim of the paper is to investigate whether it is possible to determine which of the two underlying explanations is causing the varying response when given final size household outbreak data containing mild and severe cases. We conduct numerical studies which show that, given data on sufficiently many households, it is generally possible to discriminate between the two models by comparing the Kullback-Leibler divergence for the two fitted models to these data.Comment: 29 pages; submitted to Journal of Mathematical Biolog

    The Equivariant Chow rings of quot schemes

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    We give a presentation for the (integral) torus-equivariant Chow ring of the quot scheme, a smooth compactification of the space of rational curves of degree d in the Grassmannian. For this presentation, we refine Evain's extension of the method of Goresky, Kottwitz, and MacPherson to express the torus-equivariant Chow ring in terms of the torus-fixed points and explicit relations coming from the geometry of families of torus-invariant curves. As part of this calculation, we give a complete description of the torus-invariant curves on the quot scheme and show that each family is a product of projective spaces.Comment: Revised slightly. Clarifed some statements and remove one straightforward proof. 26 pages, many .eps figure

    Auto-Encoding Sequential Monte Carlo

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    We build on auto-encoding sequential Monte Carlo (AESMC): a method for model and proposal learning based on maximizing the lower bound to the log marginal likelihood in a broad family of structured probabilistic models. Our approach relies on the efficiency of sequential Monte Carlo (SMC) for performing inference in structured probabilistic models and the flexibility of deep neural networks to model complex conditional probability distributions. We develop additional theoretical insights and introduce a new training procedure which improves both model and proposal learning. We demonstrate that our approach provides a fast, easy-to-implement and scalable means for simultaneous model learning and proposal adaptation in deep generative models
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