The omics era: what can nuclear magnetic resonance tell us on metabolomics?

A brief overview of the potentiality and use of the metabolic fingerprint of a system or biological process is here proposed. The information on the type, quantity and variation of the pool of metabolites and its relationship with a given biological process is commonly referred to as metabolomics. One powerful analytical approach to the detection and quantitation of metabolites is by Nuclear Magnetic Resonance Spectroscopy (NMR). Additionally, the recently introduced High Resolution Magic Angle Spinning (HR-MAS) NMR approach improved dramatically the potentiality of the method allowing direct sampling of ex vivo specimens, such as tissues and cells, without any pre-treatment or extraction steps. The NMR data can be processed towards the target or non-target analysis of the metabolites. The former passes through the identification of all the metabolites, the latter adopts a multivariate statistical approach such as Principal Components Analysis. In this article, the main methodological points of NMR analysis with multivariate statistics are briefly outlined and discussed. A final case-study on the discrimination of healthy and neoplastic tissues via HR-MAS NMR metabolomics is reported as a paradigmatic application

Spectral deconvolution in electrophoretic NMR to investigate the migration of neutral molecules in electrolytes

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Association and diffusion of Li+ in carboxymethylcellulose solutions with application to environmentally friendly Li-ion batteries: a combined Molecular Dynamics and NMR study

Carboxymethylcellulose (CMC) has been proposed as a polymeric binder for the electrodes in environmentally friendly Li-ion batteries. Its physical properties and interaction with Li+ ions in water are interesting from the point of view of electrode preparationprocessability in water is one of the main reasons for its environmental friendlinessbut also for its possible application in aqueous Li-ion batteries. We combine MD simulations and variable-time PFGSE-NMR spectroscopy to investigate Li+ transport in CMC-based solutions. Both simulation and experiment show that, at concentrations such that Li-CMC has a gel like consistency, the Li+ diffusion coefficient is still very close to that in water. These ions interact preferentially with CMC’s carboxylate groups, giving rise to a rich variety of coordination patterns. However, the diffusion of Li+ in these systems is essentially unrestricted, with a fast, nanosecond-scale exchange of the ions between CMC and the aqueous environment

Inclusion complexes of β-cyclodextrin with tricyclic drugs: an X-ray diffraction, NMR and molecular dynamics study

Tricyclic fused-ring cyclobenzaprine (1) and amitriptyline (2) form 1:1 inclusion complexes with β-cyclodextrin (β-CD) in the solid state and in water solution. Rotating frame NOE experiments (ROESY) showed the same geometry of inclusion for both 1/β-CD and 2/β-CD complexes, with the aromatic ring system entering the cavity from the large rim of the cyclodextrin and the alkylammonium chain protruding out of the cavity and facing the secondary OH rim. These features matched those found in the molecular dynamics (MD) simulations in solution and in the solid state from single-crystal X-ray diffraction of 1/β-CD and 2/β-CD complexes. The latter complex was found in a single conformation in the solid state, whilst the MD simulations in explicit water reproduced the conformational transitions observed experimentally for the free molecule

Multiple points of view of heteronuclear NOE: long range vs short range contacts in pyrrolidinium based ionic liquids in the presence of Li salts.

The nuclear Overhauser enhancement (NOE) is a powerful tool of NMR Spectroscopy extensively used to gain structural information in ionic liquids (ILs). A general model for the distance dependence of intermolecular NOE in ILs was recently proposed showing that NOE spots beyond the first solvation shell and accounts for long-range effects. This conclusion prompted for a deep rethinking of the NOE data interpretation in ILs. In this paper we present an extensive and quantitative study of N-propyl-N-methyl pyrrolidinium bis(trifluoromethanesulfonyl)imide (PYR13TFSI), the homologue with bis(fluorosulfonyl)imide (PYR13FSI), and their mixtures with LiTFSI based on {1H-19F} and {1H-7Li}NOE correlation experiments (HOESY). The former is mainly tuned on long-range interactions, the latter on short-range ones, due to the small and large Larmor frequency differences of the involved nuclei. The collected data are discussed in two different way: long-range {1H-19F}NOEs spot on the polar/apolar domains within the ILs, whereas short-range (e.g. regarding the first coordination shell) {1H-7Li}NOEs describe the contacts between first neighbors, with interesting correlation with the distances’ statistics derived by crystallographic data of related systems

Polydisperse methyl β-cyclodextrin–epichlorohydrin polymers: variable contact time 13C CP-MAS solid-state NMR characterization

The polymerization of partially methylated β-cyclodextrin (CRYSMEB) with epichlorohydrin was carried out in the presence of a known amount of toluene as imprinting agent. Three different preparations (D1, D2 and D3) of imprinted polymers were obtained and characterized by solid-state 13C NMR spectroscopy under cross-polarization magic angle spinning (CP-MAS) conditions. The polymers were prepared by using the same synthetic conditions but with different molar ratios of imprinting agent/monomer, leading to morphologically equivalent materials but with different absorption properties. The main purpose of the work was to find a suitable spectroscopic descriptor accounting for the different imprinting process in three homogeneous polymeric networks. The polymers were characterized by studying the kinetics of the cross-polarization process. This approach is based on variable contact time CP-MAS spectra, referred to as VCP-MAS. The analysis of the VCP-MAS spectra provided two relaxation parameters: TCH (the CP time constant) and T1ρ (the proton spin-lattice relaxation time in the rotating frame). The results and the analysis presented in the paper pointed out that TCH is sensitive to the imprinting process, showing variations related to the toluene/cyclodextrin molar ratio used for the preparation of the materials. Conversely, the observed values of T1ρ did not show dramatic variations with the imprinting protocol, but rather confirmed that the three polymers are morphologically similar. Thus the combined use of TCH and T1ρ can be helpful for the characterization and fine tuning of imprinted polymeric matrices

Insights into the Effect of Lithium Doping on the Deep Eutectic Solvent Choline Chloride: Urea

Choline-based deep eutectic solvents (DESs) are potential candidates to replace flammable organic solvent electrolytes in lithium-ion batteries (LIBs). The effect of the addition of a lithium salt on the structure and dynamics of the material needs to be clarified before it enters the battery. Here, the archetypical DES choline chloride:urea at 1:2 mole fraction has been added with lithium chloride at two different concentrations and the effect of the additional cation has been evaluated with respect to the non-doped system via multinuclear NMR techniques. 1H and 7Li spin-lattice relaxation times and diffusion coefficients have been measured between 298 K and 373 K and revealed a decrease in both rotational and translational mobility of the species after LiCl doping at a given temperature. Temperature dependent 35Cl linewidths reflect the viscosity increase upon LiCl addition, yet keep track of the lithium complexation. Quantitative indicators such as correlation times and activation energies give indirect insights into the intermolecular interactions of the mixtures, while lithium single-jump distance and transference number shed light into the lithium transport, being then of help in the design of future DES electrolytes

Transport properties of ibuprofen encapsulated in cyclodextrin nanosponge hydrogels: A proton HR-MAS NMR spectroscopy study

The chemical cross-linking of β-cyclodextrin (β-CD) with ethylenediaminetetraacetic dianhydride (EDTA) led to branched polymers referred to as cyclodextrin nanosponges (CDNSEDTA). Two different preparations are described with 1:4 and 1:8 CD-EDTA molar ratios. The corresponding cross-linked polymers were contacted with 0.27 M aqueous solution of ibuprofen sodium salt (IP) leading to homogeneous, colorless, drug loaded hydrogels. The systems were characterized by high resolution magic angle spinning (HR-MAS) NMR spectroscopy. Pulsed field gradient spin echo (PGSE) NMR spectroscopy was used to determine the mean square displacement (MSD) of IP inside the polymeric gel at different observation times td. The data were further processed in order to study the time dependence of MSD: MSD = f(td). The proposed methodology is useful to characterize the different diffusion regimes that, in principle, the solute may experience inside the hydrogel, namely normal or anomalous diffusion. The full protocols including the polymer preparation and purification, the obtainment of drug-loaded hydrogels, the NMR sample preparation, the measurement of MSD by HR-MAS NMR spectroscopy and the final data processing to achieve the time dependence of MSD are here reported and discussed. The presented experiments represent a paradigmatic case and the data are discussed in terms of innovative approach to the characterization of the transport properties of an encapsulated guest within a polymeric host of potential application for drug delivery