Not all toxic butterflies are toxic: high intra- and interspecific variation in sequestration in subtropical swallowtails

Many herbivorous insects make use of plant secondary metabolites by consuming and storing these toxic compounds in their body tissue or integument, thereby obtaining chemical defense against their natural enemies. Swallowtail butterflies in the tribe Troidini (Papilionidae) sequester toxic alkaloids (aristolochic acids, AAs) from their host plants in the genus Aristolochia. Troidine butterflies have been a model group for development of theory on host plant chemical sequestration, but most studies on this group have been limited to a single species in North America. These studies have led, in part, to the paradigm that troidine butterflies are toxic, thereby explaining the numerous mimicry relationships that exist throughout most of their range. Herein, we present one of the first comparative studies in a single location of a community of troidine butterflies. We examined the AA content of five co-occurring troidine butterfly species and their two Aristolochia host plants. We found that one Aristolochia species, A. triangularis, was preferred in choice assays and did not possess quantifiable levels of AA. We also found that most troidine butterflies did not possess quantifiable levels of AAs, but larvae have the ability to sequester AAs when it is present in their diet. A larval preference experiment showed that host plant AA concentration did not influence larval feeding choice. A performance experiment showed that higher levels of AAs in the diet increased larval mortality, which might indicate a cost associated with sequestration of the chemical defense and also might shed some light on why so many troidine butterflies in this community have little or no AAs. We propose that automimicry might be operating in this system and many putative models of this paradigmatic system might not possess plant-derived defensive chemistry

Higher Education Strategy in Responding to the Generative AI Revolution Decolonising the Standard Response and Action Planning Protocols

Background: The Generative Artifical Intelligence (AI) revolution is here, and the availability of resources such as ChatGPT has triggered rapid responses, actions, and strategy to address the implications this has on education in the United Kingdom (UK). ChatGPT and other Generative AI provisions are viewed as both problematic and beneficial by Higher Education Institutes (HEI’s). Alongside HEI’s, Higher Education England (HEE) Technology Enhanced Learning (TEL) forums are just 1 of many additional UK national groups prioritising the discussion, Continual Professional Development (CPD), and strategical approaches to analysing Generative AI, in determining how it should be addressed in education and practice. In terms of standard practice at London South Bank University (LSBU), the planning of projects and research to explore new technology lies predominantly with those deemed as the most “skilled”, “technical” or “aware” of the technology. People who are in specific roles within the institute are expected to “lead” on strategy, and this onus of responsibility often remains with them throughout the process from start to finish. Recognising the imbalance of power and the benefits of privilege this practice could create, a decision was made to explore and propose re-design of the current protocols in place at LSBU. Aim: Demonstrate the inclusion of a Decolonising step at the earliest designing stage of the project, to influence a practice change in how a HEI could respond to major items affecting education and any subsequent action-planning or project designing. Method: 3 academic members of staff, and 3 undergraduate students, of Black, Asian, African or Minority ethnicity, will be recruited. Individual and group sessions will be conducted using Microsoft Teams. Sessions will involve the participants leading on the discussion and development of the project proposal and associated documents being used in the larger study. This will occur between 19th May – 1st June 2023, after which the project proposal will be registered with the LSBU research ethics committee and internal registration system (Haplo). The Decolonising strategy and effects will be appraised by an independent investigator making objective comparisons to a version of the project protocol originally written by the Principal Investigator as a lone researcher. Themes and major highlights to demonstrate these comparisons, will be presented as the outcome for this project. All results and recommendations will be ready for presentation by no later than 15th June 2023. Expected Outcomes: Recommendations based on the outcome could feasibly affect changes in the future strategy for responding to major items requiring adaptation and evolution in education/practices, and potential other general and/or specific response/action-planning protocols, at London South Bank University. Additional information: This project forms part of a larger LSBU Generative AI project to explore a potential solution to the issues surrounding Generative AI in Higher Education

Contamination

Soil contamination occurs when substances are added to soil, resulting in increases in concentrations above background or reference levels. Pollution may follow from contamination when contaminants are present in amounts that are detrimental to soil quality and become harmful to the environment or human health. Contamination can occur via a range of pathways including direct application to land and indirect application from atmospheric deposition. Contamination was identified by SEPA (2001) as a significant threat to soil quality in many parts of Scotland. Towers et al. (2006) identified four principal contamination threats to Scottish soils: acidification; eutrophication; metals; and pesticides. The Scottish Soil Framework (Scottish Government, 2009) set out the potential impact of these threats on the principal soil functions. Severe contamination can lead to “contaminated land” [as defined under Part IIA of the Environmental Protection Act (1990)]. This report does not consider the state and impacts of contaminated land on the wider environment in detail. For further information on contaminated land, see ‘Dealing with Land Contamination in Scotland’ (SEPA, 2009). This chapter considers the causes of soil contamination and their environmental and socio-economic impacts before going on to discuss the status of, and trends in, levels of contaminants in Scotland’s soils

Explosive diversification following a benthic to pelagic shift in freshwater fishes

BACKGROUND: Interspecific divergence along a benthic to pelagic habitat axis is ubiquitous in freshwater fishes inhabiting lentic environments. In this study, we examined the influence of this habitat axis on the macroevolution of a diverse, lotic radiation using mtDNA and nDNA phylogenies for eastern North America\u27s most species-rich freshwater fish clade, the open posterior myodome (OPM) cyprinids. We used ancestral state reconstruction to identify the earliest benthic to pelagic transition in this group and generated fossil-calibrated estimates of when this shift occurred. This transition could have represented evolution into a novel adaptive zone, and therefore, we tested for a period of accelerated lineage accumulation after this historical habitat shift. RESULTS: Ancestral state reconstructions inferred a similar and concordant region of our mtDNA and nDNA based gene trees as representing the shift from benthic to pelagic habitats in the OPM clade. Two independent tests conducted on each gene tree suggested an increased diversification rate after this inferred habitat transition. Furthermore, lineage through time analyses indicated rapid early cladogenesis in the clade arising after the benthic to pelagic shift. CONCLUSIONS: A burst of diversification followed the earliest benthic to pelagic transition during the radiation of OPM cyprinids in eastern North America. As such, the benthic/pelagic habitat axis has likely influenced the generation of biodiversity across disparate freshwater ecosystems. doi: 10.1186/1471-2148-13-27

High flow conditions mediate damaging impacts of sub-lethal thermal stress on corals' endosymbiotic algae

The effects of thermal anomalies on tropical coral endosymbiosis can be mediated by a range of environmental factors, which in turn ultimately influence coral health and survival. One such factor is the water flow conditions over coral reefs and corals. Although the physiological benefits of living under high water flow are well known, there remains a lack of conclusive experimental evidence characterizing how flow mitigates thermal stress responses in corals. Here we use in situ measurements of flow in a variety of reef habitats to constrain the importance of flow speeds on the endosymbiosis of an important reef building species under different thermal regimes. Under high flow speeds (0.15 m s−1) and thermal stress, coral endosymbionts retained photosynthetic function and recovery capacity for longer compared to low flow conditions (0.03 m s−1). We hypothesize that this may be due to increased rates of mass transfer of key metabolites under higher flow, putatively allowing corals to maintain photosynthetic efficiency for longer. We also identified a positive interactive effect between high flow and a pre-stress, sub-lethal pulse in temperature. While higher flow may delay the onset of photosynthetic stress, it does not appear to confer long-term protection; sustained exposure to thermal stress (eDHW accumulation equivalent to 4.9°C weeks) eventually overwhelmed the coral meta-organism as evidenced by eventual declines in photo-physiological function and endosymbiont densities. Investigating flow patterns at the scale of metres within the context of these physiological impacts can reveal interesting avenues for coral reef management. This study increases our understanding of the effects of water flow on coral reef health in an era of climate change and highlights the potential to learn from existing beneficial bio-physical interactions for the effective preservation of coral reefs into the future

On the dependent recognition of some long zinc finger proteins

The human genome contains about 800 C2H2 zinc finger proteins (ZFPs), and most of them are composed of long arrays of zinc fingers. Standard ZFP recognition model asserts longer finger arrays should recognize longer DNA-binding sites. However, recent experimental efforts to identify in vivo ZFP binding sites contradict this assumption, with many exhibiting short motifs. Here we use ZFY, CTCF, ZIM3, and ZNF343 as examples to address three closely related questions: What are the reasons that impede current motif discovery methods? What are the functions of those seemingly unused fingers and how can we improve the motif discovery algorithms based on long ZFPs\u27 biophysical properties? Using ZFY, we employed a variety of methods and find evidence for \u27dependent recognition\u27 where downstream fingers can recognize some previously undiscovered motifs only in the presence of an intact core site. For CTCF, high-throughput measurements revealed its upstream specificity profile depends on the strength of its core. Moreover, the binding strength of the upstream site modulates CTCF\u27s sensitivity to different epigenetic modifications within the core, providing new insight into how the previously identified intellectual disability-causing and cancer-related mutant R567W disrupts upstream recognition and deregulates the epigenetic control by CTCF. Our results establish that, because of irregular motif structures, variable spacing and dependent recognition between sub-motifs, the specificities of long ZFPs are significantly underestimated, so we developed an algorithm, ModeMap, to infer the motifs and recognition models of ZIM3 and ZNF343, which facilitates high-confidence identification of specific binding sites, including repeats-derived elements. With revised concept, technique, and algorithm, we can discover the overlooked specificities and functions of those \u27extra\u27 fingers, and therefore decipher their broader roles in human biology and diseases

Evaluation of Adjunctive Mycophenolate for Large Vessel Giant Cell Arteritis

Funding: We are grateful to Versus Arthritis (grant 22088) and PMR/GCA Scotland for supporting our workPeer reviewedPublisher PD