From Late Miocene to Holocene: Processes of Differentiation within the Telestes Genus (Actinopterygii: Cyprinidae)

Investigating processes and timing of differentiation of organisms is critical in the understanding of the evolutionary mechanisms involved in microevolution, speciation, and macroevolution that generated the extant biodiversity. From this perspective, the Telestes genus is of special interest: the Telestes species have a wide distribution range across Europe (from the Danubian district to Mediterranean districts) and have not been prone to translocation. Molecular data (mtDNA: 1,232 bp including the entire Cyt b gene; nuclear genome: 11 microsatellites) were gathered from 34 populations of the Telestes genus, almost encompassing the entire geographic range. Using several phylogenetic and molecular dating methods interpreted in conjunction with paleoclimatic and geomorphologic evidence, we investigated the processes and timing of differentiation of the Telestes lineages. The observed genetic structure and diversity were largely congruent between mtDNA and microsatellites. The Messinian Salinity Crisis (Late Miocene) seems to have played a major role in the speciation processes of the genus. Focusing on T. souffia, a species occurring in the Danube and Rhone drainages, we were able to point out several specific events from the Pleistocene to the Holocene that have likely driven the differentiation and the historical demography of this taxon. This study provides support for an evolutionary history of dispersal and vicariance with unprecedented resolution for any freshwater fish in this region

Mixing and convection in the Greenland Sea from a tracer-release experiment

Convective vertical mixing in restricted areas of the subpolar oceans, such as the Greenland Sea, is thought to be the process responsible for forming much of the dense water of the ocean interior. Deep-water formation varies substantially on annual and decadal timescales, and responds to regional climate signals such as the North Atlantic Oscillation; its variations may therefore give early warning of changes in the thermohaline circulation that may accompany climate change8. Here we report direct measurements of vertical mixing, by convection and by turbulence, from a sulphur hexafluoride tracer-release experiment in the central Greenland Sea gyre. In summer, we found rapid turbulent vertical mixing of about 1.1 cm2 s-1. In the following late winter, part of the water column was mixed more vigorously by convection, indicated by the rising and vertical redistribution of the tracer patch in the centre of the gyre. At the same time, mixing outside the gyre centre was only slightly greater than in summer. The results suggest that about 10% of the water in the gyre centre was vertically transported in convective plumes, which reached from the surface to, at their deepest, 1,200–1,400 m. Convection was limited to a very restricted area, however, and smaller volumes of water were transported to depth than previously estimated. Our results imply that it may be the rapid year-round turbulent mixing, rather than convection, that dominates vertical mixing in the region as a whole

Loss and retention of resistance genes in five species of the Brassicaceae family

Background: Plants have evolved disease resistance (R) genes encoding for nucleotide-binding site (NB) and leucine-rich repeat (LRR) proteins with N-terminals represented by either Toll/Interleukin-1 receptor (TIR) or coiled-coil (CC) domains. Here, a genome-wide study of presence and diversification of CC-NB-LRR and TIR-NB-LRR encoding genes, and shorter domain combinations in 19 Arabidopsis thaliana accessions and Arabidopsis lyrata, Capsella rubella, Brassica rapa and Eutrema salsugineum are presented.Results: Out of 528 R genes analyzed, 12 CC-NB-LRR and 17 TIR-NB-LRR genes were conserved among the 19 A. thaliana genotypes, while only two CC-NB-LRRs, including ZAR1, and three TIR-NB-LRRs were conserved when comparing the five species. The RESISTANCE TO LEPTOSPHAERIA MACULANS 1 (RLM1) locus confers resistance to the Brassica pathogen L. maculans the causal agent of blackleg disease and has undergone conservation and diversification events particularly in B. rapa. On the contrary, the RLM3 locus important in the immune response towards Botrytis cinerea and Alternaria spp. has recently evolved in the Arabidopsis genus.Conclusion: Our genome-wide analysis of the R gene repertoire revealed a large sequence variation in the 23 cruciferous genomes. The data provides further insights into evolutionary processes impacting this important gene family