Low hydrological connectivity after summer drought inhibits DOC export in a forested headwater catchment

Understanding the controls on event-driven dissolved organic carbon (DOC) export is crucial as DOC is an important link between the terrestrial and the aquatic carbon cycles. We hypothesized that topography is a key driver of DOC export in headwater catchments because it influences hydrological connectivity, which can inhibit or facilitate DOC mobilization. To test this hypothesis, we studied the mechanisms controlling DOC mobilization and export in the Große Ohe catchment, a forested headwater in a mid-elevation mountainous region in southeastern Germany. Discharge and stream DOC concentrations were measured at an interval of 15 min using in situ UV-Vis (ultraviolet–visible) spectrometry from June 2018 until October 2020 at two topographically contrasting subcatchments of the same stream. At the upper location (888 m above sea level, a.s.l.), the stream drains steep hillslopes, whereas, at the lower location (771 m a.s.l.), it drains a larger area, including a flat and wide riparian zone. We focus on four events with contrasting antecedent wetness conditions and event size. During the events, in-stream DOC concentrations increased up to 19 mg L−1 in comparison to 2–3 mg L−1 during baseflow. The concentration–discharge relationships exhibited pronounced but almost exclusively counterclockwise hysteresis loops which were generally wider in the lower catchment than in the upper catchment due to a delayed DOC mobilization in the flat riparian zone. The riparian zone released considerable amounts of DOC, which led to a DOC load up to 7.4 kg h−1. The DOC load increased with the total catchment wetness. We found a disproportionally high contribution to the total DOC export of the upper catchment during events following a long dry period. We attribute this to the low hydrological connectivity in the lower catchment during drought, which inhibited DOC mobilization, especially at the beginning of the events. Our data show that not only event size but also antecedent wetness conditions strongly influence the hydrological connectivity during events, leading to a varying contribution to DOC export of subcatchments, depending on topography. As the frequency of prolonged drought periods is predicted to increase, the relative contribution of different subcatchments to DOC export may change in the future when hydrological connectivity will be reduced more often.</p

Comparative genomic analysis and molecular examination of the diversity of enterotoxigenic Escherichia coli isolates from Chile

Enterotoxigenic Escherichia coli (ETEC) is one of the most common diarrheal pathogens in the low- and middle-income regions of the world, however a systematic examination of the genomic content of isolates from Chile has not yet been undertaken. Whole genome sequencing and comparative analysis of a collection of 125 ETEC isolates from three geographic locations in Chile, allowed the interrogation of phylogenomic groups, sequence types and genes specific to isolates from the different geographic locations. A total of 80.8% (101/125) of the ETEC isolates were identified in E. coli phylogroup A, 15.2% (19/125) in phylogroup B, and 4.0% (5/125) in phylogroup E. The over-representation of genomes in phylogroup A was significantly different from other global ETEC genomic studies. The Chilean ETEC isolates could be further subdivided into sub-clades similar to previously defined global ETEC reference lineages that had conserved multi-locus sequence types and toxin profiles. Comparison of the gene content of the Chilean ETEC identified genes that were unique based on geographic location within Chile, phylogenomic classifications or sequence type. Completion of a limited number of genomes provided insight into the ETEC plasmid content, which is conserved in some phylogenomic groups and not conserved in others. These findings suggest that the Chilean ETEC isolates contain unique virulence factor combinations and genomic content compared to global reference ETEC isolates

Comparative genomics and transcriptomics of Escherichia coli isolates carrying virulence factors of both enteropathogenic and enterotoxigenic E. coli

AbstractEscherichia coli that are capable of causing human disease are often classified into pathogenic variants (pathovars) based on their virulence gene content. However, disease-associated hybrid E. coli, containing unique combinations of multiple canonical virulence factors have also been described. Such was the case of the E. coli O104:H4 outbreak in 2011, which caused significant morbidity and mortality. Among the pathovars of diarrheagenic E. coli that cause significant human disease are the enteropathogenic E. coli (EPEC) and enterotoxigenic E. coli (ETEC). In the current study we use comparative genomics, transcriptomics, and functional studies to characterize isolates that contain virulence factors of both EPEC and ETEC. Based on phylogenomic analysis, these hybrid isolates are more genomically-related to EPEC, but appear to have acquired ETEC virulence genes. Global transcriptional analysis using RNA sequencing, demonstrated that the EPEC and ETEC virulence genes of these hybrid isolates were differentially-expressed under virulence-inducing laboratory conditions, similar to reference isolates. Immunoblot assays further verified that the virulence gene products were produced and that the T3SS effector EspB of EPEC, and heat-labile toxin of ETEC were secreted. These findings document the existence and virulence potential of an E. coli pathovar hybrid that blurs the distinction between E. coli pathovars.</jats:p

An Investigation Of The Recent Deterioration Of I-75 In Scott County

In early January of 1999, approximately 15 miles ofl-75 in Scott County began to rapidly deteriorate. The existing pavement exhibited several potholes and delaminations. The worst section of deterioration fell approximately between milepoints 125 and 133. In the latter part of January, the condition of the highway had declined to the point thatcorrective action was necessary. The worst sections were milled and patched with hotmixasphalt (HMA). Despite this temporary improvement to the pavement condition, adesire developed within the Department to investigate the cause of the deterioration inorder to prevent a future similar occurrence. Therefore, personnel from the Division of Materials and the Kentucky Transportation Center conducted an abbreviated investigation of the deteriorating pavement and theasphalt mixtures involved. The findings from this investigation, including analyses of thehistorical data for these mixtures and testing of the in-place pavement, revealed severalpossibilities for the premature pavement failure. These possibilities included questionable quality of the aggregates in the mixtures, lowasphalt contents and high dust contents, poor volumetric properties of the mixtures, andlow in-place densities and high permeability of the existing pavement. It was concludedthat no single deficiency caused the failure, but rather, a combination of several factors. A companion section of I-7 5 immediately south of the deteriorated Scott County portions,constructed about one year prior to the pavement presently in question, continues toperform well. Investigation of this pavement and the involved asphalt mixtures revealedhigher asphalt contents, better volumetric properties, higher in-place densities, and lowerpermeability. It is believed that recent revisions to the applicable asphalt mixture specifications have allbut eliminated the possibility of the recurrence of this type of failure. Mixtures designedcurrently under the Superpave system undergo greater scrutiny and must satisfy tougherspecifications. Also, asphalt mixtures are accepted differently today than when thispavement was originally constructed. It is highly unlikely that the mixtures that arecurrently deteriorating on I-75 could satisfy today\u27s specifications

Uncertainty in water transit time estimation with StorAge Selection functions and tracer data interpolation

Transit time distributions (TTDs) of streamflow are useful descriptors for understanding flow and solute transport in catchments. Catchment-scale TTDs can be modeled using tracer data (e.g. oxygen isotopes, such as δ18O) in inflow and outflows by employing StorAge Selection (SAS) functions. However, tracer data are often sparse in space and time, so they need to be interpolated to increase their spatiotemporal resolution. Moreover, SAS functions can be parameterized with different forms, but there is no general agreement on which one should be used. Both of these aspects induce uncertainty in the simulated TTDs, and the individual uncertainty sources as well as their combined effect have not been fully investigated. This study provides a comprehensive analysis of the TTD uncertainty resulting from 12 model setups obtained by combining different interpolation schemes for δ18O in precipitation and distinct SAS functions. For each model setup, we found behavioral solutions with satisfactory model performance for in-stream δ18O (KGEĝ€¯>ĝ€¯0.55, where KGE refers to the Kling-Gupta efficiency). Differences in KGE values were statistically significant, thereby showing the relevance of the chosen setup for simulating TTDs. We found a large uncertainty in the simulated TTDs, represented by a large range of variability in the 95ĝ€¯% confidence interval of the median transit time, varying at the most by between 259 and 1009ĝ€¯d across all tested setups. Uncertainty in TTDs was mainly associated with the temporal interpolation of δ18O in precipitation, the choice between time-variant and time-invariant SAS functions, flow conditions, and the use of nonspatially interpolated δ18O in precipitation. We discuss the implications of these results for the SAS framework, uncertainty characterization in TTD-based models, and the influence of the uncertainty for water quality and quantity studies

Conservation and global distribution of non-canonical antigens in enterotoxigenic Escherichia coli

BACKGROUND: Enterotoxigenic Escherichia coli (ETEC) cause significant diarrheal morbidity and mortality in children of resource-limited regions, warranting development of effective vaccine strategies. Genetic diversity of the ETEC pathovar has impeded development of broadly protective vaccines centered on the classical canonical antigens, the colonization factors and heat-labile toxin. Two non-canonical ETEC antigens, the EtpA adhesin, and the EatA mucinase are immunogenic in humans and protective in animal models. To foster rational vaccine design that complements existing strategies, we examined the distribution and molecular conservation of these antigens in a diverse population of ETEC isolates. METHODS: Geographically diverse ETEC isolates (n = 1159) were interrogated by PCR, immunoblotting, and/or whole genome sequencing (n = 46) to examine antigen conservation. The most divergent proteins were purified and their core functions assessed in vitro. RESULTS: EatA and EtpA or their coding sequences were present in 57.0% and 51.5% of the ETEC isolates overall, respectively; and were globally dispersed without significant regional differences in antigen distribution. These antigens also exhibited \u3e93% amino acid sequence identity with even the most divergent proteins retaining the core adhesin and mucinase activity assigned to the prototype molecules. CONCLUSIONS: EtpA and EatA are well-conserved molecules in the ETEC pathovar, suggesting that they serve important roles in virulence and that they could be exploited for rational vaccine design