GPU driven finite difference WENO scheme for real time solution of the shallow water equations

The shallow water equations are applicable to many common engineering problems involving modelling of waves dominated by motions in the horizontal directions (e.g. tsunami propagation, dam breaks). As such events pose substantial economic costs, as well as potential loss of life, accurate real-time simulation and visualization methods are of great importance. For this purpose, we propose a new finite difference scheme for the 2D shallow water equations that is specifically formulated to take advantage of modern GPUs. The new scheme is based on the so-called Picard integral formulation of conservation laws combined with Weighted Essentially Non-Oscillatory reconstruction. The emphasis of the work is on third order in space and second order in time solutions (in both single and double precision). Further, the scheme is well-balanced for bathymetry functions that are not surface piercing and can handle wetting and drying in a GPU-friendly manner without resorting to long and specific case-by-case procedures. We also present a fast single kernel GPU implementation with a novel boundary condition application technique that allows for simultaneous real-time visualization and single precision simulations even on large ( > 2000 × 2000) grids on consumer-level hardware - the full kernel source codes are also provided online at https://github.com/pparna/swe_pifweno3

Evolved polygenic herbicide resistance in Lolium rigidum by low-dose herbicide selection within standing genetic variation

The interaction between environment and genetic traits under selection is the basis of evolution. In this study, we have investigated the genetic basis of herbicide resistance in a highly characterized initially herbicide-susceptible Lolium rigidum population recurrently selected with low (below recommended label) doses of the herbicide diclofop-methyl. We report the variability in herbicide resistance levels observed in F1 families and the segregation of resistance observed in F2 and back-cross (BC) families. The selected herbicide resistance phenotypic trait(s) appear to be under complex polygenic control. The estimation of the effective minimum number of genes (NE), depending on the herbicide dose used, reveals at least three resistance genes had been enriched. A joint scaling test indicates that an additive-dominance model best explains gene interactions in parental, F1, F2 and BC families. The Mendelian study of six F2 and two BC segregating families confirmed involvement of more than one resistance gene. Cross-pollinated L. rigidum under selection at low herbicide dose can rapidly evolve polygenic broad-spectrum herbicide resistance by quantitative accumulation of additive genes of small effect. This can be minimized by using herbicides at the recommended dose which causes high mortality acting outside the normal range of phenotypic variation for herbicide susceptibility

A summary of research on the NASA-Global Atmospheric Sampling Program performed by the Atmospheric Sciences Research Center

The annual variations of ozone near the tropopause are derived from aircraft exhibit year-to-year differences which are not explicitly accounted for by the simple, classical ozone transport theory. Phenomena such as tropopause lifting, interannual variations in the rates of stratospheric-tropospheric exchange and meridional mixing, contribute differently to the distribution of ozone in this altitude region. Ozone encounter climatologies have been represented by global maps which show the probabilities of exceeding ambient ozone levels of 200, 300, and 400 ppbV along flight routes during the year. Continuous ozone records obtained from the GASP system revealed the presence of gravity waves whose wavelength is of the order 20 km. The GASP data cannot, however, be utilized for the evaluation of horizontal fluxes of such quantities as ozone, sensible heat, and zonal momentum; the data are too sparsely and irregularly distributed for the computation of stable correlations. Multiple species data from the unique circumglobal flight of a Pan American airliner on 28-30 October 1977 are discussed with particular regard to the apparent interhemispheric differences in tropospheric species concentrations, variation between the Arctic and Antarctic stratospheres, to possible covariations between species, and to potential source regions for various constituents

Linking individual behaviour to community scale patterns in fungi

The fungi comprise a separate kingdom of life and epitomise the indeterminate growth form. Very little is known about the factors that influence the nature of fungal diversity and the link between individual behaviour and the structure and function of fungal communities is particularly poorly understood. Here, we present a theoretical framework that is capable of elucidating this link. An individual-based model for fungal community dynamics is introduced that has been developed from a physiologically based model for the fungal phenotype. The model is used to explore the role of individual interactions, the production of an external inhibitor field and the quality of the external environment on the structure and diversity of the resulting community. We show that traits relating to growth rate, autophagic behaviour and the production of inhibitors are key in influencing the success of a particular genotype in a community. The species richness increases with the amount of available resource. This is the first model of fungal community dynamics that introduces the concept of a biomass-based abundance distribution function that can be described by the log-normal form which typically corresponds to communities in equilibrium. The species abundance curve was stable to changes in the relative location of inocula, although the ranked abundance of the individuals was not. We present the first attempt to identify the traits that affect the form of that curve. Future studies should examine the role of environmental heterogeneity and spore dispersal

A DECISION SUPPORT AID FOR BEEF CATTLE INVESTMENT USING EXPERT SYSTEMS

The beef cattle investment decision provides an excellent opportunity to increase the economic efficiency of beef cattle production. The investment questions that face beef cattle producers are of interest to beef cattle producers, educators, and financial institutions involved in lending to beef cattle producing firms. This study develops a decision support aid utilizing expert system technology to assist beef cattle producers in making well-founded investment decisions with respect to the firm's beef cattle herd.Beef cattle investment, Decision support, Export systems, Livestock Production/Industries,

The effect of internal gravity waves on cloud evolution in sub-stellar atmospheres

Context. Sub-stellar objects exhibit photometric variability which is believed to be caused by a number of processes such as magnetically-driven spots or inhomogeneous cloud coverage. Recent sub-stellar models have shown that turbulent flows and waves, including internal gravity waves, may play an important role in cloud evolution.Aims. The aim of this paper is to investigate the effect of internal gravity waves on dust cloud nucleation and dust growth, and whether observations of the resulting cloud structures could be used to recover atmospheric density information.Methods. For a simplified atmosphere in two dimensions, we numerically solve the governing fluid equations to simulate the effect on dust nucleation and mantle growth as a result of the passage of an internal gravity wave. Furthermore, we derive an expression that relates the properties of the wave-induced cloud structures to observable parameters in order to deduce the atmospheric density.Results. Numerical simulations show that the density, pressure and temperature variations caused by gravity waves lead to an increase of dust nucleation by up to a factor 20, and dust mantle growth rate by up to a factor 1:6, compared to their equilibrium values. Through an exploration of the wider sub-stellar parameter space, we show that in absolute terms, the increase in dust nucleation due to internal gravity waves is stronger in cooler (T dwarfs) and TiO2-rich sub-stellar atmospheres. The relative increase however is greater in warm(L dwarf) and TiO2-poor atmospheres due to conditions less suited for efficient nucleation at equilibrium. These variations lead to banded areas in which dust formation is much more pronounced, and lead to banded cloud structures similar to those observed on Earth. Conclusions. Using the proposed method, potential observations of banded clouds could be used to estimate the atmospheric density of sub-stellar objects

Sixty Years of Fractal Projections

Sixty years ago, John Marstrand published a paper which, among other things, relates the Hausdorff dimension of a plane set to the dimensions of its orthogonal projections onto lines. For many years, the paper attracted very little attention. However, over the past 30 years, Marstrand's projection theorems have become the prototype for many results in fractal geometry with numerous variants and applications and they continue to motivate leading research.Comment: Submitted to proceedings of Fractals and Stochastics

The Myth of Multiple Methods

This paper addresses issues surrounding the combining of quantitative and qualitative methods in a single research design. Reference is made to attempts by information systems researchers to combine research methods. It is argued that the four paradigm model of Burrell and Morgan has encouraged researchers to seek cross-paradigmatic research designs. Argument is offered that cross-paradigmatic research is unsound. A different paradigm framework is introduced and used to support a focus on the nature of the phenomenon to be investigated and the questions to be answered rather than the method to be used

Combining X-ray CT and 3D printing technology to produce microcosms with replicable, complex pore geometries

Measurements in soils have been traditionally used to demonstrate that soil architecture is one of the key drivers of soil processes. Major advances in the use of X-ray Computed Tomography (CT) afford significant insight into the pore geometry of soils, but until recently no experimental techniques were available to reproduce this complexity in microcosms. This article describes a 3D additive manufacturing technology that can print physical structures with pore geometries reflecting those of soils. The process enables printing of replicated structures, and the printing materials are suitable to study fungal growth. This technology is argued to open up a wealth of opportunities for soil biological studies