A Vibrio T6SS-Mediated Lethality in an Aquatic Animal Model

ABSTRACT Bacteria belonging to the genus Vibrio include many known and emerging pathogens. Horizontal gene transfer of pathogenicity islands is a major contributor to the emergence of new pathogenic Vibrio strains. Here, we use the brine shrimp Artemia salina as a model and show that the marine bacterium Vibrio proteolyticus uses a horizontally shared type VI secretion system, T6SS3, to intoxicate a eukaryotic host. Two T6SS3 effectors, which were previously shown to induce inflammasome-mediated pyroptotic cell death in mammalian phagocytic cells, contribute to this toxicity. Furthermore, we find a novel T6SS3 effector that also contributes to the lethality mediated by this system against Artemia salina. Therefore, our results reveal a T6SS that is shared among diverse vibrios and mediates host lethality, indicating that it can lead to the emergence of new pathogenic strains. IMPORTANCE The rise in sea surface temperature has been linked to the spread of bacteria belonging to the genus Vibrio and the human illnesses associated with them. Since vibrios often share virulence traits horizontally, a better understanding of their virulence potential and determinants can prepare us for new emerging pathogens. In this work, we showed that a toxin delivery system found in various vibrios mediates lethality in an aquatic animal. Taken together with previous reports showing that the same system induces inflammasome-mediated cell death in mammalian phagocytic cells, our findings suggest that this delivery system and its associated toxins may contribute to the emergence of pathogenic strains

The RIX domain defines a class of polymorphic T6SS effectors and secreted adaptors

Abstract Bacteria use the type VI secretion system (T6SS) to deliver toxic effectors into bacterial or eukaryotic cells during interbacterial competition, host colonization, or when resisting predation. Identifying effectors is a challenging task, as they lack canonical secretion signals or universally conserved domains. Here, we identify a protein domain, RIX, that defines a class of polymorphic T6SS cargo effectors. RIX is widespread in the Vibrionaceae family and is located at N-termini of proteins containing diverse antibacterial and anti-eukaryotic toxic domains. We demonstrate that RIX-containing proteins are delivered via T6SS into neighboring cells and that RIX is necessary and sufficient for T6SS-mediated secretion. In addition, RIX-containing proteins can enable the T6SS-mediated delivery of other cargo effectors by a previously undescribed mechanism. The identification of RIX-containing proteins significantly enlarges the repertoire of known T6SS effectors, especially those with anti-eukaryotic activities. Furthermore, our findings also suggest that T6SSs may play an underappreciated role in the interactions between vibrios and eukaryotes

Domestic water versus imported virtual blue water for agricultural production: A comparison based on energy consumption and related greenhouse gas emissions

AbstractThe supply of water, food, and energy in our global economy is highly interlinked. Virtual blue water embedded into internationally traded food crops has therefore been extensively researched in recent years. This study focuses on the often neglected energy needed to supply this blue irrigation water. It provides a globally applicable and spatially explicit approach to the watershed level for water source specific quantification of energy consumption and related greenhouse gas (GHG) emissions of irrigation water supply. The approach is applied to Israel's total domestic and imported food crop supply of 105 crops by additionally including import‐related transportation energy and emissions. Total energy use and related emissions of domestic crop production were much lower (551 GWh/422 kt CO2‐equivalents [CO2e]) than those embedded into crop imports (1639 GWh/649 kt CO2e). Domestic energy and emissions were mainly attributable to the irrigation water supply with artificial water sources (treated domestic wastewater and desalinated water, 84%). Transport accounted for 79% and 66% of virtually imported energy and emissions, respectively. Despite transport, specific GHG emissions (CO2e per ton of crop) were significantly lower for several crops (e.g., olives, almonds, chickpeas) compared to domestic production. This could be attributed to the high share of energy‐intensive artificial water supply in combination with higher irrigation water demands in Israel. In the course of an increasing demand for artificial water supply in arid and semi‐arid regions, our findings point to the importance of including “energy for water” into comparative environmental assessment of crop supply to support decision‐making related to the water–energy–food nexus.MedWaterFederal Ministry of Education and Research, German

Domestic water versus imported virtual blue water for agricultural production: A comparison based on energy consumption and related greenhouse gas emissions

The supply of water, food, and energy in our global economy is highly interlinked. Virtual blue water embedded into internationally traded food crops has therefore been extensively researched in recent years. This study focuses on the often neglected energy needed to supply this blue irrigation water. It provides a globally applicable and spatially explicit approach to the watershed level for water source specific quantification of energy consumption and related greenhouse gas (GHG) emissions of irrigation water supply. The approach is applied to Israel's total domestic and imported food crop supply of 105 crops by additionally including import-related transportation energy and emissions. Total energy use and related emissions of domestic crop production were much lower (551 GWh/422 kt CO 2-equivalents [CO 2e]) than those embedded into crop imports (1639 GWh/649 kt CO 2e). Domestic energy and emissions were mainly attributable to the irrigation water supply with artificial water sources (treated domestic wastewater and desalinated water, 84%). Transport accounted for 79% and 66% of virtually imported energy and emissions, respectively. Despite transport, specific GHG emissions (CO 2e per ton of crop) were significantly lower for several crops (e.g., olives, almonds, chickpeas) compared to domestic production. This could be attributed to the high share of energy-intensive artificial water supply in combination with higher irrigation water demands in Israel. In the course of an increasing demand for artificial water supply in arid and semi-arid regions, our findings point to the importance of including “energy for water” into comparative environmental assessment of crop supply to support decision-making related to the water–energy–food nexus

Water circles—a tool to assess and communicate the water cycle

‘Water circles’ are presented as flexible water cycle diagrams aggregating the flows through a system for a specific region and time period, categorized by flow type and organized by magnitude. Water circles for an entire system and separate storage components can be interpreted as water cycle speedometers and can help compare and communicate different climate and human impacts on different regions, time periods, and storage components. Water circles can facilitate comparisons between hydrological models and other methods for deriving water balances

iiasa/CWatM: CWatM reservoir, crop, snow update

<h3>CWatM reservoir, crop, snow update</h3> <p>CWatM 1.081 same as 1.08 but with zenodo doi</p> <p>CWatM version to run for ISIMIP3, IWMI basins</p> <p>Documentation https://cwatm.iiasa.ac.at/</p> <p>Meteo forcing for historical and future see: https://protocol.isimip.org/</p&gt

Water circles—a tool to assess and communicate the water cycle

‘Water circles’ are presented as flexible water cycle diagrams aggregating the flows through a system for a specific region and time period, categorized by flow type and organized by magnitude. Water circles for an entire system and separate storage components can be interpreted as water cycle speedometers and can help compare and communicate different climate and human impacts on different regions, time periods, and storage components. Water circles can facilitate comparisons between hydrological models and other methods for deriving water balances

Guidance for assessing interregional ecosystem service flows

Ecosystem services (ES)assessments commonly focus on a specific biophysical region or nation and take its geographic borders as the system boundary. Most geographical regions are, however, not closed systems but are open and telecoupled with other regions, such that the use of ES in one location is dependent on ecosystem processes and ecological management in other locations. Interregional ES flows often affect national economies and may trigger issues of national security and global equity. To date, however, methodologies for assessing interregional flows of ES have been published in dispersed literature. This paper provides a three-step guidance for how to assess four different types of interregional ES flows (traded goods, passive biophysical flows, species migration and dispersal as well as information flows). This guidance is intended to complement national and regional ecosystem assessments. The three steps are to (i)define the goal and scope of interregional ES flow assessments, (ii)quantify the interregional ES flows using a tiered approach and (iii)interpret results in terms of uncertainties, consequences and governance options. We compile different indicators for assessing interregional ES flows and evaluate their suitability for national and regional ES assessments. Finally, to assess the implications of interregional ES flows for environmental sustainability and human well-being, we relate our flow indicators to the Sustainable Development Goals. This guidance towards systematic assessment of interregional ES flows provides a first step to measure and quantify externalised environmental costs and can contribute to the development of indicators to address interregional imbalances in trade, foreign policy and beyond

Guidance for assessing interregional ecosystem service flows

Ecosystem services (ES) assessments commonly focus on a specific biophysical region or nation and take its geographic borders as the system boundary. Most geographical regions are, however, not closed systems but are open and telecoupled with other regions, such that the use of ES in one location is dependent on ecosystem processes and ecological management in other locations. Interregional ES flows often affect national economies and may trigger issues of national security and global equity. To date, however, methodologies for assessing interregional flows of ES have been published in dispersed literature. This paper provides a three-step guidance for how to assess four different types of interregional ES flows (traded goods, passive biophysical flows, species migration and dispersal as well as information flows). This guidance is intended to complement national and regional ecosystem assessments. The three steps are to (i) define the goal and scope of interregional ES flow assessments, (ii) quantify the interregional ES flows using a tiered approach and (iii) interpret results in terms of uncertainties, consequences and governance options. We compile different indicators for assessing interregional ES flows and evaluate their suitability for national and regional ES assessments. Finally, to assess the implications of interregional ES flows for environmental sustainability and human well-being, we relate our flow indicators to the Sustainable Development Goals. This guidance towards systematic assessment of interregional ES flows provides a first step to measure and quantify externalised environmental costs and can contribute to the development of indicators to address interregional imbalances in trade, foreign policy and beyond.JRC.D.5-Food Securit