2 and 3-dimensional Hamiltonians with Shape Invariance Symmetry

Via a special dimensional reduction, that is, Fourier transforming over one of the coordinates of Casimir operator of su(2) Lie algebra and 4-oscillator Hamiltonian, we have obtained 2 and 3 dimensional Hamiltonian with shape invariance symmetry. Using this symmetry we have obtained their eigenspectrum. In the mean time we show equivalence of shape invariance symmetry and Lie algebraic symmetry of these Hamiltonians.Comment: 24 Page

Pattern Functional Dependencies for Data Cleaning

Patterns (or regex-based expressions) are widely used to constrain the format of a domain (or a column), e.g., a Year column should contain only four digits, and thus a value like "1980-" might be a typo. Moreover, integrity constraints (ICs) defined over multiple columns, such as (conditional) functional dependencies and denial constraints, e.g., a ZIP code uniquely determines a city in the UK, have been widely used in data cleaning. However, a promising, but not yet explored, direction is to combine regex- and IC-based theories to capture data dependencies involving partial attribute values. For example, in an employee ID such as"F-9-107", "F" is sufficient to determine the finance department. Inspired by the above observation, we propose a novel class of ICs, called pattern functional dependencies (PFDs), to model fine-grained data dependencies gleaned from partial attribute values. These dependencies cannot be modeled using traditional ICs, such as (conditional) functional dependencies, which work on entire attribute values. We also present a set of axioms for the inference of PFDs, analogous to Armstrong's axioms for FDs, and study the complexity of consistency and implication analysis of PFDs. Moreover, we devise an effective algorithm to automatically discover PFDs even in the presence of errors in the data. Our extensive experiments on 15 real-world datasets show that our approach can effectively discover valid and useful PFDs over dirty data, which can then be used to detect data errors that are hard to capture by other types of ICs

Heritability and selection response estimation of growth rate in common carp (Cyprinus carpio) of Caspian Sea

The Common carp is the most important culture fish in the word, that can be consider as domestic fish. The Common carp of Caspian Sea is one of the economic fish, that have some morphenological differences, resistance in salt water and better quality in meet with domestic once and for using this fish in culture system, it is necessary to establish genetically parameters especially the heritability for selection purpose. The present study have been started from 2007 and lasted 3 years. The breeders were collected from the Gomishan station in south-east of Caspian Sea by fisherman and stocked in S.Rajaei fish restocking center and propagate based on the routine propagation technique in this farm. For heritability estimation a factorial crosses by 7×7 fish were done. Therefore, the fingerlings of 49 crosses were achieved, that kept first separately fiberglass tank and then in pond separately. Weight and length of fish were choice for heritability estimation. The average weight of juvenile common carp in 3 sampling stage of 90, 180 and 360 days, were 5.9, 35.7 and 84.7 gram and length of 9.6, 14.7 and 19.2 cm respectively. The heritability estimation for weight was 0.26 and length 0.25. Selection response based on selection difference by collection the more average breeders among their progeny were 36.4 g that means by selection every generation, there is about 4 percent improving in fish weight

Investigation of JC polyomavirus (JCV) genome in colorectal cancer patients from Iran

Background: JC polyomavirus (JCV) is an epitheliotropic and neurotropic virus that identified in relationship with some devastating complications such as progressive multifocal leukoencephalopathy (PML) and linked to colorectal cancer. The aim of current study was to identify the prevalence of JCV in colorectal cancer for the first time in Iran. Methods: This retrospective case-control study was conducted by the hospitals affiliated to Iran University of Medical Sciences, Tehran, Iran from 2011 to 2016. Formalin-fixed paraffin-embedded (FFPE) blocks were used for DNA extraction by QIAamp® DNA FFPE Tissue Kit. The SYBER Green Real-time PCR assay performed by specific primers for JCV T-Large Ag. Melting curve analysis used for evaluation of amplification specificity. Positive control cloned in pTZ57R/T plasmid by Generay Biotechnology system. Results: Of 157 specimens 66 were colorectal cancer by the mean age (y) ± std. deviation 59.35±14.48 and 91 healthy control by the mean age (y) ± std. deviation 57.21±14.66. All 157 specimens tested for JCV T-Large Ag gene by Real-time PCR method and we found that there was not any positive result although the melting analysis showed specificity of positive control amplification. Conclusion: Low prevalence of JCV infection in Iranian CRC population confirmed by the current study results; there was not any JCV positive result in CRC and healthy control groups. Further studies by broader and different populations are recommended

Customized clinical practice guidelines for management of adult cataract in Iran

Purpose: To customize clinical practice guidelines (CPGs) for cataract management in the Iranian population. Methods: First, four CPGs (American Academy of Ophthalmology 2006 and 2011, Royal College of Ophthalmologists 2010, and Canadian Ophthalmological Society 2008) were selected from a number of available CPGs in the literature for cataract management. All recommendations of these guidelines, together with their references, were studied. Each recommendation was summarized in 4 tables. The first table showed the recommendation itself in clinical question components format along with its level of evidence. The second table contained structured abstracts of supporting articles related to the clinical question with their levels of evidence. The third table included the customized recommendation of the internal group respecting its clinical advantage, cost, and complications. In the fourth table, the internal group their recommendations from 1 to 9 based on the customizing capability of the recommendation (applicability, acceptability, external validity). Finally, customized recommendations were sent one month prior to a consensus session to faculty members of all universities across the country asking for their comments on recommendations. Results: The agreed recommendations were accepted as conclusive while those with no agreement were discussed at the consensus session. Finally, all customized recommendations were codified as 80 recommendations along with their sources and levels of evidence for the Iranian population. Conclusion: Customization of CPGs for management of adult cataract for the Iranian population seems to be useful for standardization of referral, diagnosis and treatment of patients. © 2015 Journal of Ophthalmic and Vision Research | Published by Wolters Kluwer - Medknow

The incidence and risk factors of non-alcoholic fatty liver disease: A cohort study from Iran

Background: Non-alcoholic fatty liver disease (NAFLD) is a condition with a global prevalence of 24. A broad spectrum of liver complications has been attributed to this condition. Objectives: This study was conducted to determine the incidence of NAFLD and its potential risk factors in a seven-year follow-up study in Iran. Methods: This is a prospective cohort population-based study conducted in the northern region of Iran. In phase I of the cohort study, 2,461 participants were selected, between 2009 and 2010, using the stratified randomization method based on the sex and age of individuals. Ultrasonographic examination was performed again after a seven-year follow-up between 2016 and 2017. The multiple binary regression analysis was applied to evaluate the association between the development of NAFLD and potential risk factors. Results: The incidence of NAFLD was 27.88 (95 CI: 25.41-30.35) in men and 30.17 (95 CI: 27.40-32.94) in women (P = 0.226) in a seven-year follow-up period. Based on the multiple binary logistic regression analysis, body mass index (BMI) OR = 1.219 (95% CI: 1.162-1.278) P < 0.001, triglyceride (TG) OR = 1.003 (95% CI: 1.001-1.005); P = 0.005 and high-density lipoprotein (HDL) OR = 0.986 (95% CI: 0.972-0.999); P = 0.046 showed a significant association with the incidence of NAFLD in men. In contrast, the marital status OR = 2.141 (95% CI: 1.286-3.565); P = 0.003, BMI OR = 1.165 (95% CI: 1.121-1.211); P < 0.001 and homeostatic model assessment for insulin resistance (HOMA-IR) OR = 1.164 (95% CI: 1.041-1.301); P = 0.007 had a significant relationship with the incidence of NAFLD in women. Conclusions: It seems that NAFLD is markedly rising in the northern part of Iran. Higher levels of BMI, TG, and HDL are considered independent risk factors for the development of NAFLD in men, while the marital status, BMI, and HOMA-IR exhibited independent risk factors with the incidence of NAFLD in women. © 2020, Author(s)

Carbon dioxide hydrogenation over the carbon-terminated niobium carbide (111) surface: a density functional theory study

Carbon dioxide (CO2) hydrogenation is an energetic process which could be made more efficient through the use of effective catalysts, for example transition metal carbides. Here, we have employed calculations based on the density functional theory (DFT) to evaluate the reaction processes of CO2 hydrogenation to methane (CH4), carbon monoxide (CO), methanol (CH3OH), formaldehyde (CH2O), and formic acid (HCOOH) over the carbon-terminated niobium carbide (111) surface. First, we have studied the adsorption geometries and energies of 25 different surface-adsorbed species, followed by calculations of all of the elementary steps in the CO2 hydrogenation process. The theoretical findings indicate that the NbC (111) surface has higher catalytic activity towards CO2 methanation, releasing 4.902 eV in energy. CO represents the second-most preferred product, followed by CH3OH, CH2O, and HCOOH, all of which have exothermic reaction energies of 4.107, 2.435, 1.090, and 0.163 eV, respectively. Except for the mechanism that goes through HCOOH to produce CH2O, all favourable hydrogenation reactions lead to desired compounds through the creation of the dihydroxycarbene (HOCOH) intermediate. Along these routes, CH3* hydrogenation to CH4* has the highest endothermic reaction energy of 3.105 eV, while CO production from HCO dehydrogenation causes the highest exothermic reaction energy of −3.049 eV. The surface-adsorbed CO2 hydrogenation intermediates have minimal effect on the electronic structure and interact only weakly with the surface. Our results are consistent with experimental observations

A survey on the effect of Cochlodinium.sp bloom on shrimp culture complexes and hatcheries activities in Bushehr Province

The aims of this project was to inform and aware about the red tide condition before entering the algal bloomer in water resources to the hatcheries and farmed shrimp complexes in Bushehr province coastal. Field investigation and sampling have been carried out in the southern of the input water channels of Mond, Delvar and Helleh farmed shrimp complexes, which are located along the coastal of Bushehr Province, from April to December 2011 .The physic-chemical parameters such as pH, salinity and water temperature and also meteorological conditions were measured and recorded on the field. The water sampling has been lunched for determination of nutrients and chlorophyll - a, phyto- and zoo- planktons. No Cochlodinium.sp outbreaks have been detected in the studied area, during the study. The only bloom which reported by a fisherman, was outbreak in offshore of Bushehr province in Khoure Khan on 13th September 2011. The sample which transferred to the Iranian National Shrimp Research Institute was included Alexandrium.sp and its density was 2 million cells per liter. The identified phytoplanktons were belonged to three order of Bacillariophyceae (52.6%) with average density of 10778 cells per liter, Dinophyceae (37.7%) with density of 7731 cells per liter and Cyanophyceae (9.7%) with density of 1980 cells. 12 genera belonged to Dinophyceae , 25 genera of Bacillariophyceae and two genera of Cyanophyceae were observed during the study. The highest density of phytoplankton was recorded in Helleh station by 18374 cells per liter. The maximum density of phytoplankton was at Delvar station by 141120 cells per liter in December. The highest density of the phytoplanktons was belonged to Dinophyceae by 126000 by cells per liter of which the Alexandrium.sp had the density of 124500 cells per liter in August 2011. From the Dinophyceae the Alexandrium.sp with mean density of 20345 cells per liter, Ornithocercus 920 cells and Prorocentrum.sp 820 cells were the predominant species. The identified Zooplankton in were belonged to 8 branches and 19 groups. The highest density of zooplankton was recorded in Helleh station by 1194 no. per liter. Nauplii were the dominant zooplankton groups with an average density of 136.4 no. per liter, Tintinnids 98.7, Cyclopoida 60.8, Calanoida 35.7 and Harpacticoids 14.5 no. per liter . The average of water and air temperature was recorded 29.4 °C and 28.3 °C, respectively. Average of salinity was 41.2 and pH was 8.46. The average of depth in all stations was 5.7 m. The mean concentrations of silicate, nitrate, nitrite, ammonia and total phosphate were 1.99, 0.03, 0.009, 0.14 0.15 ppm, respectively and the average of chlorophyll - a was 0.94 mg.m-3

Relativistic quantum effects of Dirac particles simulated by ultracold atoms

Quantum simulation is a powerful tool to study a variety of problems in physics, ranging from high-energy physics to condensed-matter physics. In this article, we review the recent theoretical and experimental progress in quantum simulation of Dirac equation with tunable parameters by using ultracold neutral atoms trapped in optical lattices or subject to light-induced synthetic gauge fields. The effective theories for the quasiparticles become relativistic under certain conditions in these systems, making them ideal platforms for studying the exotic relativistic effects. We focus on the realization of one, two, and three dimensional Dirac equations as well as the detection of some relativistic effects, including particularly the well-known Zitterbewegung effect and Klein tunneling. The realization of quantum anomalous Hall effects is also briefly discussed.Comment: 22 pages, review article in Frontiers of Physics: Proceedings on Quantum Dynamics of Ultracold Atom

Investigation of CTNNB1 gene mutations and expression in hepatocellular carcinoma and cirrhosis in association with hepatitis B virus infection

Hepatitis B virus (HBV), along with Hepatitis C virus chronic infection, represents a major risk factor for hepatocellular carcinoma (HCC) development. However, molecular mechanisms involved in the development of HCC are not yet completely understood. Recent studies have indicated that mutations in CTNNB1 gene encoding for β-catenin protein lead to aberrant activation of the Wnt/ β-catenin pathway. The mutations in turn activate several downstream genes, including c-Myc, promoting the neoplastic process. The present study evaluated the mutational profile of the CTNNB1 gene and expression levels of CTNNB1 and c-Myc genes in HBV-related HCC, as well as in cirrhotic and control tissues. Mutational analysis of the β-catenin gene and HBV genotyping were conducted by direct sequencing. Expression of β-catenin and c-Myc genes was assessed using real-time PCR. Among the HCC cases, 18.1 showed missense point mutation in exon 3 of CTNNB1, more frequently in codons 32, 33, 38 and 45. The frequency of mutation in the hotspots of exon 3 was significantly higher in non-viral HCCs (29.4) rather than HBV-related cases (12.7, P = 0.021). The expression of β-catenin and c-Myc genes was found upregulated in cirrhotic tissues in association with HBV infection. Mutations at both phosphorylation and neighboring sites were associated with increased activity of the Wnt pathway. The results demonstrated that mutated β-catenin caused activation of the Wnt pathway, but the rate of CTNNB1 gene mutations was not related to HBV infection. HBV factors may deregulate the Wnt pathway by causing epigenetic alterations in the HBV-related HCC. © 2020 The Author(s)