Surgical management of complex ileocolonic Crohn’s disease: a survey of IBD colorectal surgeons to assess variability in operative strategy

Cirurgia colorectal; Malaltia de Crohn; Resecció ileocecalCirugía colorrectal; Enfermedad de Crohn; Resección ileocecalColorectal surgery; Crohn’s disease; Ileocaecal resectionIntroduction To explore the reported variability in the surgical management of ileocolonic Crohn’ s disease and identify areas of standard practice, we present this study which aims to assess how different colorectal surgeons with a subspecialty interest in inflammatory bowel disease (IBD) surgery may act in different clinical scenarios of ileocolonic Crohn’s disease. Methods Anonymous videos demonstrating the small bowel walkthrough and anonymised patients’ clinical data, imaging and pathological findings were distributed to the surgeons using an electronic tool. Surgeons answered on operative strategy, bowel resections, management of small bowel mesentery, type of anastomosis and use of stomas. Results Eight small bowel walkthrough videos were registered and 12 assessors completed the survey with a questionnaire completion rate of 87.5%. There was 87.7% agreement in the need to perform an ileocolonic resection. However, the agreement for the need to perform associated surgical procedures such as strictureplasties or further bowel resections was only 57.4%. When an anastomosis was fashioned, the side to side configuration was the most commonly used. The preferred management of the mesentery was dissection close to the bowel. Conclusions The decision on the main procedure to be performed had a high agreement amongst the different assessors, but the treatment of multifocal disease was highly controversial, with low agreement on the need for associated procedures to treat internal fistulae and the use of strictureplasties. At the same time, there was significant heterogeneity in the decision on when to anastomose and when to fashion an ileostomy

Comparative genomic analysis of the biotechnological potential of the novel species Pseudomonas wadenswilerensis CCOS 864T and Pseudomonas reidholzensis CCOS 865T

In recent years, the use of whole-cell biocatalysts and biocatalytic enzymes in biotechnological applications originating from the genus Pseudomonas has greatly increased. In 2014, two new species within the Pseudomonas putida group were isolated from Swiss forest soil. In this study, the high quality draft genome sequences of Pseudomonas wadenswilerensis CCOS 864T and Pseudomonas reidholzensis CCOS 865T were used in a comparative genomics approach to identify genomic features that either di ered between these two new species or to selected members of the P. putida group. The genomes of P. wadenswilerensis CCOS 864T and P. reidholzensis CCOS 865T were found to share genomic features for the degradation of aromatic compounds or the synthesis of secondary metabolites. In particular, genes encoding for biocatalytic relevant enzymes belonging to the class of oxidoreductases, proteases and isomerases were found, that could yield potential applications in biotechnology. Ecologically relevant features revealed that both species are probably playing an important role in the degradation of soil organic material, the accumulation of phosphate and biocontrol against plant pathogens

High-quality draft genome sequence of Pseudomonas reidholzensis strain CCOS 865T

We have sequenced and assembled the genome of Pseudomonas reidholzensis CCOS 865T, which was isolated in 2014 from forest soil. Members of the genus Pseudomonas play important roles in environmental systems and are utilized in many biotechnological processes. The genome of this species may provide an important resource for the discovery of novel enzyme activities

Complete genome sequence of the cyanogenic phosphate-solubilizing Pseudomonas sp. strain CCOS 191 : a close relative of Pseudomonas mosseli

We sequenced the complete genome of the isolate Pseudomonas sp. CCOS 191. This strain is able to dissolve phosphate minerals and form cyanide. The genome sequence is used to establish the phylogenetic relationship of this species

Ecotoxicity variation through parabens degradation by single and catalytic ozonation using volcanic rock

Parabens are widely used as antimicrobial and preservative ingredients in pharmaceutical and personal care products. Nevertheless, these compounds have been increasingly seen as emerging contaminants that can be toxic to a wide range of species. In this study, the toxic effect of a mixture of parabens (10 mg/L of each paraben: methyl-, ethyl-, propyl-, benzyl- and butylparaben) and its degradation products through single and catalytic ozonation (using volcanic rock as low-cost catalyst) was investigated over several non-target species: cladocerans, microalgae, clams, macrophytes and cress. The analysis of the toxicity of parabens mixture is relevant since usually these compounds are used as blends rather than individually. While parabens were totally removed both by single and catalytic ozonation the toxicity of the samples resulting from both treatments was generally high. This toxicity was still compared to the one obtained for several dilutions of the initial parabens mixture and it was concluded that the by-products formed are more toxic than the most diluted parabens mixture sample (0.625 mg/L). While catalytic ozonation allows reducing the amount of ozone (about 3-fold) required for total removal of parabens, the resulting treated solution was more toxic than the sample taken at the endpoint of the single ozonation treatment. This suggests that the highest amount of ozone used for single ozonation allowed the elimination of toxic by-products such as hydroquinone and 1,4-benzoquinone. Still, the effect of by-products and parabens interaction depends on the species analyzed due to their different tolerances to potentially toxic products.publishe