Brain–computer interfacing with interactive systems-Case study 2

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Radiogenomics in clear cell renal cell carcinoma: correlations between advanced CT imaging (texture analysis) and microRNAs expression

Purpose: A relevant challenge for the improvement of clear cell renal cell carcinoma management could derive from the identification of novel molecular biomarkers that could greatly improve the diagnosis, prognosis, and treatment choice of these neoplasms. In this study, we investigate whether quantitative parameters obtained from computed tomography texture analysis may correlate with the expression of selected oncogenic microRNAs. Methods: In a retrospective single-center study, multiphasic computed tomography examination (with arterial, portal, and urographic phases) was performed on 20 patients with clear cell renal cell carcinoma and computed tomography texture analysis parameters such as entropy, kurtosis, skewness, mean, and standard deviation of pixel distribution were measured using multiple filter settings. These quantitative data were correlated with the expression of selected microRNAs (miR-21-5p, miR-210-3p, miR-185-5p, miR-221-3p, miR-145-5p). Both the evaluations (microRNAs and computed tomography texture analysis) were performed on matched tumor and normal corticomedullar tissues of the same patients cohort. Results: In this pilot study, we evidenced that computed tomography texture analysis has robust parameters (eg, entropy, mean, standard deviation) to distinguish normal from pathological tissues. Moreover, a higher coefficient of determination between entropy and miR-21-5p expression was evidenced in tumor versus normal tissue. Interestingly, entropy and miR-21-5p show promising correlation in clear cell renal cell carcinoma opening to a radiogenomic strategy to improve clear cell renal cell carcinoma management. Conclusion: In this pilot study, a promising correlation between microRNAs and computed tomography texture analysis has been found in clear cell renal cell carcinoma. A clear cell renal cell carcinoma can benefit from noninvasive evaluation of texture parameters in adjunction to biopsy results. In particular, a promising correlation between entropy and miR-21-5p was found

An inverse source problem for the heat equation and the enclosure method

An inverse source problem for the heat equation is considered. Extraction formulae for information about the time and location when and where the unknown source of the equation firstly appeared are given from a single lateral boundary measurement. New roles of the plane progressive wave solutions or their complex versions for the backward heat equation are given.Comment: 23page

Expression of adrenomedullin and proadrenomedullin N-terminal 20 peptide in human and rat prostate

Adrenomedullin (AM) and proadrenomedullin N-terminal 20 peptide (PAMP) are two recently discovered hypotensive peptides translated from the same message transcript (preproAM mRNA). In this article we report the presence of AM, PAMP, and their mRNA in human and rat prostate and of AM receptor mRNA in rat prostate. PreproAM mRNA was found in the epithelium of normal human and rat prostate glands by in situ hybridization. In humans, it was mainly expressed in the basal cells. In rat, its expression was higher in the ducts than in the acini of all the prostate lobes. Immunocytochemistry identified a similar distribution pattern for AM compared with its mRNA but showed different locations for AM and PAMP immunoreactivity. The former was widespread in the epithelia, whereas the latter was almost exclusively found in neuroendocrine cells. In rat, Western blot analysis confirmed the presence of high levels of AM peptide in the ventral lobe and of its precursor in the ventral and dorsolateral lobes. Immunoreactivity for serotonin, chromogranin A, PAMP, and AM defined four subpopulations of prostate neuroendocrine-like cells in rat, a cell type that has not been previously described

Reduced-order semi-implicit schemes for fluid-structure interaction problems

POD-Galerkin reduced-order models (ROMs) for fluid-structure interaction problems (incompressible fluid and thin structure) are proposed in this paper. Both the high-fidelity and reduced-order methods are based on a Chorin-Temam operator-splitting approach. Two different reduced-order methods are proposed, which differ on velocity continuity condition, imposed weakly or strongly, respectively. The resulting ROMs are tested and compared on a representative haemodynamics test case characterized by wave propagation, in order to assess the capabilities of the proposed strategies

Adrenomedullin expression in the mouse mammary gland: evidence for the mature form in milk

Adrenomedullin (AM) is a recently identified amidated peptide produced by a variety of tissue types. We have investigated the involvement of AM and its receptor (AM-R) in developing mouse mammary glands and have examined what influence ovarian hormones have on AM and AM-R expression in this system. Tissues from ductal morphogenesis, virgin adult, pregnancy, and lactation stages were assessed for AM and AM-R by molecular, biochemical and immunohistochemical techniques. Results from these studies indicated that messenger RNA for AM and AM-R and immunoreactivity for AM were expressed in the luminal epithelium of small and large ducts and in terminal end buds. Immunoreactive AM was identified as a cytoplasm component of ductal cells, with some cells also having nuclear staining. Western blot analysis of mammary gland tissues yielded two molecular mass species (M(r) 14,000 and 18,500) of AM immunoreactivity in the mammary gland for the above developmental stages, consistent with processed intermediate and prohormone forms respectively. Ovariectomy alone or followed by hormonal treatments did not alter the expression pattern for these two proteins. By Western blot, the fully processed AM form (M(r) 6000) was identified in milk extracts from lactating glands. These data suggest a potential role for AM and its receptor in the maintenance of mammary gland homeostasis and suggests a potential role for AM in development of the newborn

Expression of adrenomedullin and its receptor during embryogenesis suggests autocrine or paracrine modes of action

The present study reports the developmental patterns of expression of adrenomedullin (AM) in rat and mouse embryos. AM is a novel multifunctional peptide recently isolated from a human pheochromocytoma, which has been shown to promote growth in a variety of mammalian cell lines. We have applied several techniques to investigate the localization of both the AM peptide and its receptor throughout development. Immunocytochemical detection has been performed using different specific antibodies against AM and its gene-related peptide pro-AM N-terminal 20 peptide. In situ hybridization showed the localization of the messenger RNAs for AM and its receptor. Western blot analysis together with reverse transcription-PCR gave further support to the localization of AM and its receptor in a variety of embryonic tissues. The localization of the receptor paralleled that of AM itself, suggesting an autocrine or paracrine mode of action. The spatio-temporal pattern of expression of AM in cardiovascular, neural, and skeletal-forming tissues as well as in the main embryonic internal organs is described. The primitive placenta, especially the giant trophoblastic cells, shows high levels of AM and AM receptor. The heart is the first organ that expresses AM during development. The kidney, lung, and developing tooth, in which epithelial-mesenchymal interactions are taking place, show specific patterns of AM expression. In several regions of the embryo, the patterns of AM expression correspond to the degree of differentiation. The possible involvement of AM in the control of embryonic invasion, proliferation, and differentiation is discussed

Cambios en los usos y cubiertas del suelo y los efectos en la vulnerabilidad en las comarcas de montaña de Cataluña. Del rol del fuego como herramienta de gestión a los incendios como amenaza

Fire is one of the oldest and most efficient tools for managing land use in the Pyrenees and has contributed to shaping a landscape of great cultural and ecological diversity. Human actions affecting land cover have introduced certain changes that affect the role and our perception of forest fires, converting them from one of the normal processes of nature into a serious threat to ecosystems and to society. This study addresses the question: what specific changes in the Pyrenees have led to the current perception of forest fire as a risk or threat? Using GIS and statistical analysis, we conducted a quantitative assessment of land cover changes and we reviewed the forest fires that have occurred in the counties (comarques) of the Catalan Pyrenees between 1993-2007, in terms of seasonality and some characteristics of the territory as altitude, slope and orientation. The results shows that: a) land cover change tend to forestry and a more homogeneous landscape; b) most surface burned occurred in bush and clear forest, what is a sign of the trend of forest transition; c) there is a concentration of fires in winter ahead of summer and are located in accessible areas.En los Pirineos el fuego ha sido una de las herramientas más antiguas y eficientes de la historia de la gestión de los usos del suelo y ha contribuido a dar forma a un paisaje de una gran diversidad. La acción humana sobre la cubierta del suelo ha introducido algunas modificaciones, de forma que los incendios forestales han dejado de ser un proceso más del sistema natural para convertirse en una grave amenaza para los ecosistemas y para la sociedad. Utilizando técnicas SIG y análisis estadístico se cuantifican los cambios en las cubiertas del suelo y se hace una diagnosis de los puntos de ignición ocurridos en las comarcas de montaña del Pirineo catalán durante el periodo 1993- 2007, en función de la estacionalidad y algunas características del territorio como la altitud, la pendiente y la orientación. De esta forma se pretende aportar argumentos que ayuden a dar respuesta a la pregunta ¿qué ha cambiado en el Pirineo para que los incendios actualmente constituyan un riesgo? Los resultados indican que: a) los cambios en las cubiertas del suelo tienden al recubrimiento arbóreo y a un paisaje forestal más homogéneo; b) la mayoría de incendios que queman mayor superfície empiezan en zonas de matorral y bosque claro, lo cual supone una muestra de la tendencia a la transición forestal después del abandono de las actividades tradicionales en las áreas de montaña c) los incendios se concentran en invierno y se localizan en zonas accesibles

Concurrent and distinct transcription and translation of transforming growth factor-beta type I and type II receptors in rodent embryogenesis

The transforming growth factor-betas (TGF-betas) are multifunctional regulatory polypeptides that play a crucial role in many cell processes and function through a set of cell surface protein receptors that includes TGF-beta type I (RI) and type II (RII). The present study reports a comprehensive comparison of the patterns of expression of TGF-beta RI and RII proteins and mRNAs in the developing mouse embryo using immunohistochemical and in situ hybridization analyses. Although widespread expression of both TGF-beta receptors was detected throughout the embryonic development period so that many similarities occur in localization of the TGF-beta receptors, TGF-beta RI was expressed in a well-defined, non-uniform pattern that was different in many respects from that of TGF-beta RII. Whereas higher levels of TGF-beta RI compared to TGF-beta RII were detected in some tissues of the embryo at the beginning of organogenesis, the level of TGF-beta RII increased more dramatically than that of TGF-beta RI during late organogenesis; this was especially true in many neural structures where TGF-beta RI and RII were comparable by day 16. The lung, kidney and intestine, in which epithelial-mesenchymal interactions occur, showed a complex pattern of TGF-beta RI and Rll expression. Additionally, northern blot hybridization and reverse transcription-polymerase chain reaction (RT-PCR) amplification showed non-uniform expression of the transcripts for TGF-beta RI and RII in embryonic and adult mouse and rat tissues. These data show that regulation of TGF-beta1 RI and RII occurs concurrently, but distinctly, in a spatial and temporal manner in rodent embryogenesis which may allow control of signal transduction of TGF-beta during development