The Grizzly, November 12, 2015

Highlighting a New Trend on Campus • Making Connections: Ursinus Prepares to Break Ground on a Structure Between Pfahler and Thomas • Acclaimed Literary Critic to Give Talk on Campus • Ursinus Brings Top Lawyer Aboard in New Position • International Perspective: How One Student Uses Dance to Connect Ethiopia and Ursinus • Can You Really Netflix and Chill Without Killing Your Grades? • Opinions: Are You a White Feminist?; Bridge of Spies • Defensive Lineman Unleashes Passion for Music • Field Hockey Upsets F&M for Titlehttps://digitalcommons.ursinus.edu/grizzlynews/1677/thumbnail.jp

Genome-Wide Association of Bipolar Disorder Suggests an Enrichment of Replicable Associations in Regions near Genes

Although a highly heritable and disabling disease, bipolar disorder's (BD) genetic variants have been challenging to identify. We present new genotype data for 1,190 cases and 401 controls and perform a genome-wide association study including additional samples for a total of 2,191 cases and 1,434 controls. We do not detect genome-wide significant associations for individual loci; however, across all SNPs, we show an association between the power to detect effects calculated from a previous genome-wide association study and evidence for replication (P = 1.5×10−7). To demonstrate that this result is not likely to be a false positive, we analyze replication rates in a large meta-analysis of height and show that, in a large enough study, associations replicate as a function of power, approaching a linear relationship. Within BD, SNPs near exons exhibit a greater probability of replication, supporting an enrichment of reproducible associations near functional regions of genes. These results indicate that there is likely common genetic variation associated with BD near exons (±10 kb) that could be identified in larger studies and, further, provide a framework for assessing the potential for replication when combining results from multiple studies

Search for eccentric black hole coalescences during the third observing run of LIGO and Virgo

Despite the growing number of confident binary black hole coalescences observed through gravitational waves so far, the astrophysical origin of these binaries remains uncertain. Orbital eccentricity is one of the clearest tracers of binary formation channels. Identifying binary eccentricity, however, remains challenging due to the limited availability of gravitational waveforms that include effects of eccentricity. Here, we present observational results for a waveform-independent search sensitive to eccentric black hole coalescences, covering the third observing run (O3) of the LIGO and Virgo detectors. We identified no new high-significance candidates beyond those that were already identified with searches focusing on quasi-circular binaries. We determine the sensitivity of our search to high-mass (total mass M>70 M⊙) binaries covering eccentricities up to 0.3 at 15 Hz orbital frequency, and use this to compare model predictions to search results. Assuming all detections are indeed quasi-circular, for our fiducial population model, we place an upper limit for the merger rate density of high-mass binaries with eccentricities 0<e≤0.3 at 0.33 Gpc−3 yr−1 at 90\% confidence level

Ultralight vector dark matter search using data from the KAGRA O3GK run

Among the various candidates for dark matter (DM), ultralight vector DM can be probed by laser interferometric gravitational wave detectors through the measurement of oscillating length changes in the arm cavities. In this context, KAGRA has a unique feature due to differing compositions of its mirrors, enhancing the signal of vector DM in the length change in the auxiliary channels. Here we present the result of a search for U(1)B−L gauge boson DM using the KAGRA data from auxiliary length channels during the first joint observation run together with GEO600. By applying our search pipeline, which takes into account the stochastic nature of ultralight DM, upper bounds on the coupling strength between the U(1)B−L gauge boson and ordinary matter are obtained for a range of DM masses. While our constraints are less stringent than those derived from previous experiments, this study demonstrates the applicability of our method to the lower-mass vector DM search, which is made difficult in this measurement by the short observation time compared to the auto-correlation time scale of DM

Relative contribution of water quality and habitat to macroinvertebrate community composition in streams influenced by agricultural land use in the Cedar Creek watershed, Indiana

The objective of this study was to determine if water quality or instream habitat had a greater impact on aquatic macroinvertebrate communities. In order to investigate the complex interactions of water chemistry and stream habitat, macroinvertebrates were collected from local streams with a history of herbicide use as part of a larger ecological assessment study. Macroinvertebrate data were compared to a variety of stream parameters. Laboratory bioassays were also conducted with a Daphnia species (Daphnia magna) and an amphipod species (Hyallela azteca) using water from the same local streams. Macroinvertebrate community response variables were correlated, through linear regression, to both instream habitat and water quality variables. While several instream habitat quality variables were significantly correlated with one or more macroinvertebrate metrics, this was true for only two water quality variables. This would indicate that variation in stream habitat, more than water quality, determines the macroinvertebrate community compositions within the study area. Sites with relatively greater nitrate concentrations were correlated with more impaired macroinvertebrate communities. Water quality effects were observed in both Daphnia and amphipod bioassays. Decreased survival was observed in amphipods exposed to water from sites with higher atrazine, total pesticide, and nitrate concentrations, when compared to both the less contaminated site and the reference treatments. However, increased reproduction was observed in Daphnia in all spring (high-exposure) creek treatments, when compared to fall (low-exposure) and reference treatments. Results from ecological assessments and bioassays indicate that future conservation practices should focus on improving stream habitat quality and reducing nitrate, while maintaining current water quality improvement practices

Appendix A. Validation of the comparability of visual and isotope methods for estimating gut passage time.

Validation of the comparability of visual and isotope methods for estimating gut passage time

Genome-wide association of bipolar disorder suggests an enrichment of replicable associations in regions near genes.

Although a highly heritable and disabling disease, bipolar disorder's (BD) genetic variants have been challenging to identify. We present new genotype data for 1,190 cases and 401 controls and perform a genome-wide association study including additional samples for a total of 2,191 cases and 1,434 controls. We do not detect genome-wide significant associations for individual loci; however, across all SNPs, we show an association between the power to detect effects calculated from a previous genome-wide association study and evidence for replication (P = 1.5×10(-7)). To demonstrate that this result is not likely to be a false positive, we analyze replication rates in a large meta-analysis of height and show that, in a large enough study, associations replicate as a function of power, approaching a linear relationship. Within BD, SNPs near exons exhibit a greater probability of replication, supporting an enrichment of reproducible associations near functional regions of genes. These results indicate that there is likely common genetic variation associated with BD near exons (±10 kb) that could be identified in larger studies and, further, provide a framework for assessing the potential for replication when combining results from multiple studies