An adaptive semi-Lagrangian advection model for transport of volcanic emissions in the atmosphere

The dispersion of volcanic emissions in the Earth atmosphere is of interest for climate research, air traffic control and human wellbeing. Current volcanic emission dispersion models rely on fixed-grid structures that often are not able to resolve the fine filamented structure of volcanic emissions being transported in the atmosphere. Here we extend an existing adaptive semi-Lagrangian advection model for volcanic emissions including the sedimentation of volcanic ash. The advection of volcanic emissions is driven by a precalculated wind field. For evaluation of the model, the explosive eruption of Mount Pinatubo in June 1991 is chosen, which was one of the largest eruptions in the 20th century. We compare our simulations of the climactic eruption on 15 June 1991 to satellite data of the Pinatubo ash cloud and evaluate different sets of input parameters. We could reproduce the general advection of the Pinatubo ash cloud and, owing to the adaptive mesh, simulations could be performed at a high local resolution while minimizing computational cost. Differences to the observed ash cloud are attributed to uncertainties in the input parameters and the course of Typhoon Yunya, which is probably not completely resolved in the wind data used to drive the model. The best results were achieved for simulations with multiple ash particle sizes

Gesture analysis for physics education researchers

Systematic observations of student gestures can not only fill in gaps in students' verbal expressions, but can also offer valuable information about student ideas, including their source, their novelty to the speaker, and their construction in real time. This paper provides a review of the research in gesture analysis that is most relevant to physics education researchers and illustrates gesture analysis for the purpose of better understanding student thinking about physics.Comment: 14 page

Sediment geochemistry influences infaunal invertebrate community composition and population abundances

Infaunal invertebrate communities are structured by various factors, including predation, resource availability, and environmental conditions. Given that these invertebrates live within sediment, it is not surprising that sediment properties play a critical role in many infaunal behaviours. When models explaining spatial and temporal variation in infaunal community composition are constructed using physical, biophysical, environmental, and sediment properties (salinity, detrital cover, elevation, particle size distribution, organic and water content, redox conditions, and penetrability), a considerable portion of the variation in the data is typically unaccounted for. This suggests that we do not fully understand all the variables that influence infaunal invertebrate communities. One suite of under-explored variables is the elemental composition/concentration of the sediments themselves. As such, we evaluated if sediment geochemistry improved model performance of the spatial variation in infaunal invertebrate communities on three intertidal mudflats in northern British Columbia, Canada. We observed that models including geochemistry data outperformed models that only included physical, biophysical, and environmental properties. Our results therefore suggest that some of the observed, and previously unaccounted for spatial variation in infaunal community composition may be a product of variation in sediment geochemistry. As such, sediment geochemistry should be accounted for when studying infaunal communities and assessing human impacts upon intertidal systems

A Standard Protocol for Liana Censuses 1

A recent increase in published studies of lianas has been paralleled by a proliferation of protocols for censusing lianas. This article seeks to increase uniformity in liana inventories by providing specific recommendations for the determination of which taxa to include, the location of diameter measurement points on individual stems, the setting of minimum stem diameter cutoffs, the treatment of multiple-stemmed and rooted clonal groups, and the measurement of noncylindrical stems. Use of more uniform liana censusing protocols may facilitate comparison of independently collected data sets and further our understanding of global patterns in liana abundance, diversity, biomass, and dynamics.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/75009/1/j.1744-7429.2006.00134.x.pd

A Standard Protocol for Liana Censuses

A recent increase in published studies of lianas has been paralleled by a proliferation of protocols for censusing lianas. This article seeks to increase uniformity in liana inventories by providing specific recommendations for the determination of which taxa to include, the location of diameter measurement points on individual stems, the setting of minimum stem diameter cutoffs, the treatment of multiple‐stemmed and rooted clonal groups, and the measurement of noncylindrical stems. Use of more uniform liana censusing protocols may facilitate comparison of independently collected data sets and further our understanding of global patterns in liana abundance, diversity, biomass, and dynamics

Nutrient dynamics of 12 Sphagnum species during establishment on a rewetted bog

Peatland degradation through drainage and peat extraction have detrimental environmental and societal consequences. Rewetting is an option to restore lost ecosystem functions, such as carbon storage, biodiversity and nutrient sequestration. Peat mosses (Sphagnum) are the most important peat-forming species in bogs. Most Sphagnum species occur in nutrient-poor habitats; however, high growth rates have been reported in artificial nutrient-rich conditions with optimal water supply. Here, we demonstrate the differences in nutrient dynamics of 12 Sphagnum species during their establishment in a 1-year field experiment at a Sphagnum paludiculture area in Germany. The 12 species are categorized into three groups (slower-, medium- and fast-growing). Establishment of peat mosses is facilitated by constant supply of nutrient-rich, low pH, and low alkalinity surface water. Our study shows that slower-growing species (S. papillosum, S. magellancium, S. fuscum, S. rubellum, S. austinii; often forming hummocks) displayed signs of nutrient imbalance. These species accumulated higher amounts of N, P, K and Ca in their capitula, and had an elevated stem N:K quotient (>3). Additionally, this group sequestered less C and K per m2 than the fast and medium-growing species (S. denticulatum, S. fallax, S. riparium, S. fimbriatum, S. squarrosum, S. palustre, S. centrale). Lower lawn thickness may have amplified negative effects of flooding in the slower-growing species. We conclude that nutrient dynamics and carbon/nutrient sequestration rates are species-specific. For bog restoration, generating ecosystem services or choosing suitable donor material for Sphagnum paludiculture, it is crucial to consider their compatibility with prevailing environmental conditions

Spatial Pattern of Standing Timber Value across the Brazilian Amazon

The Amazon is a globally important system, providing a host of ecosystem services from climate regulation to food sources. It is also home to a quarter of all global diversity. Large swathes of forest are removed each year, and many models have attempted to predict the spatial patterns of this forest loss. The spatial patterns of deforestation are determined largely by the patterns of roads that open access to frontier areas and expansion of the road network in the Amazon is largely determined by profit seeking logging activities. Here we present predictions for the spatial distribution of standing value of timber across the Amazon. We show that the patterns of timber value reflect large-scale ecological gradients, determining the spatial distribution of functional traits of trees which are, in turn, correlated with timber values. We expect that understanding the spatial patterns of timber value across the Amazon will aid predictions of logging movements and thus predictions of potential future road developments. These predictions in turn will be of great use in estimating the spatial patterns of deforestation in this globally important biome

Effects of Exogenous Galanin on Neuropathic Pain State and Change of Galanin and Its Receptors in DRG and SDH after Sciatic Nerve-Pinch Injury in Rat

A large number of neuroanatomical, neurophysiologic, and neurochemical mechanisms are thought to contribute to the development and maintenance of neuropathic pain. However, mechanisms responsible for neuropathic pain have not been completely delineated. It has been demonstrated that neuropeptide galanin (Gal) is upregulated after injury in the dorsal root ganglion (DRG) and spinal dorsal horn (SDH) where it plays a predominantly antinociceptive role. In the present study, sciatic nerve-pinch injury rat model was used to determine the effects of exogenous Gal on the expression of the Gal and its receptors (GalR1, GalR2) in DRG and SDH, the alterations of pain behavior, nerve conduction velocity (NCV) and morphology of sciatic nerve. The results showed that exogenous Gal had antinociceptive effects in this nerve-pinch injury induced neuropathic pain animal model. It is very interesting that Gal, GalR1 and GalR2 change their expression greatly in DRG and SDH after nerve injury and intrathecal injection of exougenous Gal. Morphological investigation displays a serious damage after nerve-pinch injury and an amendatory regeneration after exogenous Gal treatment. These findings imply that Gal, via activation of GalR1 and/or GalR2, may have neuroprotective effects in reducing neuropathic pain behaviors and improving nerve regeneration after nerve injury