Thermal Density Functional Theory in Context

This chapter introduces thermal density functional theory, starting from the ground-state theory and assuming a background in quantum mechanics and statistical mechanics. We review the foundations of density functional theory (DFT) by illustrating some of its key reformulations. The basics of DFT for thermal ensembles are explained in this context, as are tools useful for analysis and development of approximations. We close by discussing some key ideas relating thermal DFT and the ground state. This review emphasizes thermal DFT's strengths as a consistent and general framework.Comment: Submitted to Spring Verlag as chapter in "Computational Challenges in Warm Dense Matter", F. Graziani et al. ed

Feed-Forward Chains of Recurrent Attractor Neural Networks Near Saturation

We perform a stationary state replica analysis for a layered network of Ising spin neurons, with recurrent Hebbian interactions within each layer, in combination with strictly feed-forward Hebbian interactions between successive layers. This model interpolates between the fully recurrent and symmetric attractor network studied by Amit el al, and the strictly feed-forward attractor network studied by Domany et al. Due to the absence of detailed balance, it is as yet solvable only in the zero temperature limit. The built-in competition between two qualitatively different modes of operation, feed-forward (ergodic within layers) versus recurrent (non- ergodic within layers), is found to induce interesting phase transitions.Comment: 14 pages LaTex with 4 postscript figures submitted to J. Phys.

TerrHum: an iPhone app for classifying forest humipedons.

The knowledge of a little number of specific terms is necessary to investigate and describe the forest topsoils: diagnostic components, diagnostic organic and organic-mineral horizons and the 17 series of humus horizons composing all the observed real forest not submerged topsoils. Diagnostic horizons are grouped in humus forms, which represent five humus systems. To become a good topsoil investigator is then only a question of field experience. No mean to do otherwise: you must go in the field with a blade and a good manual and put your hand in the soil. You have to make a hole and to observe on your knee a wall of the pit, from the top to the bottom, detecting all the characters that you find indicated in the manual. At the beginning you will be discouraged, things change from a site to another and never are exactly as in the manual. After few days of difficult survey, you will be able to know your soil even without doing a hole. Be patient and follow what it is indicated in the published first eight articles of Humusica (http://intra.tesaf.unipd.it/people/zanella/hmanual.html). On the poster, you find some examples of diagnostic properties of forest topsoils, and a dichotomy key of classification, you can copy paste and take with you in the field. An iPhone application (Terrhum) allows to bring in the field the necessary information for a fast classification of the topsoil

TerrHum: an iOS application for classifying terrestrial humipedons and some considerations about soil classification

International audienceThe name TerrHum is an abbreviation of the words “Terrestrial” (not hydromorphic, not submerged) and “Humipedon” (organic and organic-mineral humus horizons). With this application, it is possible to describe and classify terrestrial forest and grassland topsoils in a system published as a Special Issue entitled “Humusica 1– Terrestrial Natural Humipedons” in the journal Applied Soil Ecology. The iOS application TerrHum allows the storage of the main content of Humusica 1 on a cellular phone. Images, diagrams and simplified tables of classification may be recalled with a few touches on the screen. Humus forms, representing five humus systems, are classified based on the vertical arrangement of diagnostic horizons and their attributes. TerrHum allows accessing specific figures that are stored in a virtual cloud and can be downloaded the first time the user recalls them. Once all figures have been opened in the device, the application is ready to use, without any further internet connection. The application is in continuous evolution

SUNDAE1: A Liquid Helium Vertical Test-Stand for 2m Long Superconducting Undulator Coils

Superconducting Undulators (SCUs) can produce higher photon flux and cover a wider photon energy range compared to permanent magnet undulators (PMUs) with the same vacuum gap and period length. To build the know-how to implement superconducting undulators for future upgrades of the European XFEL facility, two magnetic measurement test stands named SUNDAE 1 and 2 (Superconducting UNDulAtor Experiment) are being developed. SUNDAE1 will facilitate research and development on magnet design thanks to the possibility of training new SCU coils and characterizing their magnetic field. The experimental setup will allow the characterization of magnets up to 2m in length. These magnets will be immersed in a Helium bath at 2K or 4K temperature. In this article, we describe the experimental setup and highlight its expected performances

Ecological Indicator Values for Europe (EIVE) 1.0

Aims: To develop a consistent ecological indicator value system for Europe for five of the main plant niche dimensions: soil moisture (M), soil nitrogen (N), soil reaction (R), light (L) and temperature (T). Study area: Europe (and closely adjacent regions). Methods: We identified 31 indicator value systems for vascular plants in Europe that contained assessments on at least one of the five aforementioned niche dimensions. We rescaled the indicator values of each dimension to a continuous scale, in which 0 represents the minimum and 10 the maximum value present in Europe. Taxon names were harmonised to the Euro+Med Plantbase. For each of the five dimensions, we calculated European values for niche position and niche width by combining the values from the individual EIV systems. Using T values as an example, we externally validated our European indicator values against the median of bioclimatic conditions for global occurrence data of the taxa. Results: In total, we derived European indicator values of niche position and niche width for 14,835 taxa (14,714 for M, 13,748 for N, 14,254 for R, 14,054 for L, 14,496 for T). Relating the obtained values for temperature niche position to the bioclimatic data of species yielded a higher correlation than any of the original EIV systems (r = 0.859). The database: The newly developed Ecological Indicator Values for Europe (EIVE) 1.0, together with all source systems, is available in a flexible, harmonised open access database. Conclusions: EIVE is the most comprehensive ecological indicator value system for European vascular plants to date. The uniform interval scales for niche position and niche width provide new possibilities for ecological and macroecological analyses of vegetation patterns. The developed workflow and documentation will facilitate the future release of updated and expanded versions of EIVE, which may for example include the addition of further taxonomic groups, additional niche dimensions, external validation or regionalisation

A Standardized Morpho-Functional Classification of the Planet’s Humipedons

It was time to take stock. We modified the humipedon classification key published in 2018 to make it easier and more practical. This morpho-functional taxonomy of the topsoil (humipedon) was only available in English; we also translated it into French and Italian. A standardized morphofunctional classification of humipedons (roughly the top 30–40 cm of soil: organic and organomineral surface horizons) would allow for a better understanding of the functioning of the soil ecosystem. This paper provides the founding principles of the classification of humipedon into humus systems and forms. With the recognition of a few diagnostic horizons, all humus systems can be determined. The humus forms that make up these humus systems are revealed by measuring the thicknesses of the diagnostic horizons. In the final part of the article, several figures represent the screenshots of a mobile phone or tablet application that allows for a fast recall of the diagnostic elements of the classification in the field. The article attempts to promote a standardized classification of humipedons for a global and shared management of soil at planet level

A standardized morpho-functional classification of the planet’s humipedons

It was time to take stock. We modified the humipedon classification key published in 2018 to make it easier and more practical. This morpho-functional taxonomy of the topsoil (humipedon) was only available in English; we also translated it into French and Italian. A standardized morphofunctional classification of humipedons (roughly the top 30–40 cm of soil: organic and organomineral surface horizons) would allow for a better understanding of the functioning of the soil ecosystem. This paper provides the founding principles of the classification of humipedon into humus systems and forms. With the recognition of a few diagnostic horizons, all humus systems can be determined. The humus forms that make up these humus systems are revealed by measuring the thicknesses of the diagnostic horizons. In the final part of the article, several figures represent the screenshots of a mobile phone or tablet application that allows for a fast recall of the diagnostic elements of the classification in the field. The article attempts to promote a standardized classification of humipedons for a global and shared management of soil at planet level

Experimental Evaluation of Seed Limitation in Alpine Snowbed Plants

Background: The distribution and abundance of plants is controlled by the availability of seeds and of sites suitable for establishment. The relative importance of these two constraints is still contentious and possibly varies among species and ecosystems. In alpine landscapes, the role of seed limitation has traditionally been neglected, and the role of abiotic gradients emphasized. Methodology/Principal Findings: We evaluated the importance of seed limitation for the incidence of four alpine snowbed species (Achillea atrata L., Achillea clusiana Tausch, Arabis caerulea L., Gnaphalium hoppeanum W. D. J. Koch) in local plant communities by comparing seedling emergence, seedling, juvenile and adult survival, juvenile and adult growth, flowering frequency as well as population growth rates lambda of experimental plants transplanted into snowbed patches which were either occupied or unoccupied by the focal species. In addition, we accounted for possible effects of competition or facilitation on these rates by including a measure of neighbourhood biomass into the analysis. We found that only A. caerulea had significantly lower seedling and adult survival as well as a lower population growth rate in unoccupied sites whereas the vital rates of the other three species did not differ among occupied and unoccupied sites. By contrast, all species were sensitive to competitive effects of the surrounding vegetation in terms of at least one of the studied rates. Conclusions/Significance: We conclude that seed and site limitation jointly determine the species composition of these snowbed plant communities and that constraining site factors include both abiotic conditions and biotic interactions. The traditional focus on abiotic gradients for explaining alpine plant distribution hence appears lopsided. The influence of seed limitation on the current distribution of these plants casts doubt on their ability to readily track shifting habitats under climate change unless seed production is considerably enhanced under a warmer climate