Age-related changes of the noradrenergic and acetylcholinesterase reactive nerve fibres innervating the pigeon bursa of Fabricius.

Age-dependent changes in the innervation of the pigeon (Columba livia, L.) bursa of Fabricius, from hatching to 120 days of age, were studied by fluorescence-histochemical and neurochemical methods for demonstrating noradrenergic and acetylcholinesterase (AChE)-reactive nerve fibres respectively. The distribution of both nerve fibre types was largely perivascular. Furthermore, a few isolated nerve fiber profiles were observed beneath the bursal epithelium, in the interfollicular septa and in the follicular cortex. No nerve fibre profiles reaching the medulla of the lymphoid follicles were observed. In addition to nerve fibres, AChE reactive neuron-like cells were encountered within the capsule and interfollicular septa. AChE reactivity was also found in dendritic-like cells localized in the cortical and cortico-medullary border. No changes in the density of perivascular noradrenergic innervation were noticeable during the ages studied, whereas the density of AChE-reactive fibres supplying vessels reached the adult pattern at 30 days, and then remained unvaried. The density of non-perivascular nerve fiber profiles, specially the AChE reactive type, increased until 30 days, remained unchanged until 75 days and then increased with aging (90-120 days). The interrelationship between the autonomic nervous system and the immune system is discussed

DIVERSITY AND HABITAT PROFILE OF THE SHALLOW WATER HOLOTHURIANS IN CAMOTES ISLANDS, CENTRAL PHILIPPINES

Species diversity and habitat profile of holothurians in Camotes Islands, Cebu Philippines were studied as baseline data for resource and ecological management. A 150 meter transect was laid in sandy, muddy and rocky substrates of the coastal barangays during the day and night assessments of the four municipalities of Camotes Islands which are San Francisco, Poro, Tudela and Pilar. Physico-chemical instruments and interview guide to the gleaners were used to gather data. Actual collection of specimen and other data was done in every 10 meter distance in the transect where a 1m quadrat was used. Results show that there are 20 species of holothurians belonging to 3 families namely Holothuriidae, Stichopodidae and Synaptidae. There are 2 species found in sandy substrate; 10 in muddy substrate; 2 in pure rocky substrate and 6 found in both rocky and muddy substrates. Results further show that there are 13 common species of Holothurians found in the four municipalities. The most diverse municipality is San Francisco which has 18 species followed by Poro (15); Pilar (14) and Tudela (13). For the distinct species, Holothuria rigida is found only in San Francisco followed by Pearsonothuria graffei (in Tudela and Pilar); Physico-chemical parameters like salinity, range from 23-38 ppt; temperature is 260C-350C, pH 4.5-8.0 both day and night assessments. Substrate grain size analysis shows that 100 microns dominate the amount of substrates in all the barangays, followed by 200 microns and then 400 microns. Keywords: Diversity, Habitat Profile, Holothurians, Camotes Island

Particle Swarm and Quantum Particle Swarm Optimization Applied to DS/CDMA Multiuser Detection

Abstract

Spatial patterns and drivers of benthic community structure on the northern Adriatic biogenic reefs

The northern Adriatic Sea (NAS) hosts numerous biogenic subtidal reefs that are considered biodiversity hotspots. Several studies have already investigated the origin and biodiversity of these reefs. However, many of them are still unexplored and further knowledge is needed for their conservation. Here, the spatial variability, epibenthic community structure, and environmental features that characterize these habitats were investigated. Fifteen randomly selected reefs were sampled between 2013 and 2017, including some remote sites that have never been studied before. A fuzzy k-means clustering method and redundancy analysis were used to find similarities among sites in terms of epibenthic assemblages and to model relationships with abiotic variables. The results showed that these reefs are highly heterogeneous in terms of species composition and geomorphological features. The results were also consistent with previous studies and highlighted three main types of benthic assemblages defined by the dominance of different organisms, mainly reflecting the coastal-offshore gradient: nearshore reefs, generally dominated by stress-tolerant species; reefs at a middle distance from the coast, characterized by sponges, non-calcareous encrusting algae and ascidians; offshore reefs, dominated by reef builders. However, distance from the coast was not the only factor affecting species distribution, as other local factors and environmental characteristics also played a role. This kind of biogenic reefs in temperate seas are still poorly known. The present work contributed to shed further light on these habitats, by complementing the results of previous studies on their natural diversity, highlighting the specificity of the epibenthic communities of NAS reefs and the need to improve current, still inadequate, conservation measures

Cholesterol lowering treatment restores blood global DNA methylation in chronic kidney disease (CKD) patients

This manuscript version is made available under the CC-BY-NC-ND 4.0 license http://creativecommons.org/licenses/by-nc-nd/4.0/ This author accepted manuscript is made available following 12 month embargo from date of publication (June 2017) in accordance with the publisher’s archiving policyBackground and aims Chronic kidney disease (CKD) is characterized by increased oxidative stress (OS). In consideration of the well-known link between OS and DNA methylation we assessed DNA methylcytosine (mCyt) concentrations in CKD patients at baseline and during cholesterol lowering treatment. Methods and results DNA methylation and OS indices (malonyldialdehyde, MDA; allantoin/uric acid ratio, All/UA) were measured in 30 CKD patients randomized to three cholesterol lowering regimens for 12 months (simvastatin 40 mg/day, ezetimibe/simvastatin 10/20 mg/day, or ezetimibe/simvastatin 10/40 mg/day) and 30 age- and sex-matched healthy controls. DNA methylation was significantly lower in CKD patients vs. controls (4.06 ± 0.20% vs. 4.27 ± 0.17% mCyt, p = 0.0001). Treatment significantly increased mCyt DNA concentrations in all patients (4.06 ± 0.04% at baseline; 4.12 ± 0.03% at 4 months; 4.17 ± 0.03% at 8 months; and 4.20 ± 0.02% at 12 months, p = 0.0001 for trend). A trend for a greater effect on DNA methylation was observed with combined treatment ezetimibe/simvastatin 10/40 mg/day (+5.2% after one year treatment). The treatment-associated mCyt increase was significantly correlated with the concomitant reduction in MDA concentrations and All/AU ratios. Conclusion Our results demonstrate that CKD patients have a lower degree of DNA methylation and that cholesterol lowering treatment restores mCyt DNA concentrations to levels similar to healthy controls. The treatment-associated increase in DNA methylation is correlated with a concomitant reduction in OS markers. The study was registered at clinicaltrials.gov (NCT00861731)

Serum methylarginines and spirometry-measured lung function in older adults

Rationale: Methylarginines are endogenous nitric oxide synthase inhibitors that have been implicated in animal models of lung disease but have not previously been examined for their association with spirometric measures of lung function in humans. Objectives: This study measured serum concentrations of asymmetric and symmetric dimethylarginine in a representative sample of older community-dwelling adults and determined their association with spirometric lung function measures. Methods: Data on clinical, lifestyle, and demographic characteristics, methylated arginines, and L-arginine (measured using LC-MS/MS) were collected from a population-based sample of older Australian adults from the Hunter Community Study. The five key lung function measures included as outcomes were Forced Expiratory Volume in 1 second, Forced Vital Capacity, Forced Expiratory Volume in 1 second to Forced Vital Capacity ratio, Percent Predicted Forced Expiratory Volume in 1 second, and Percent Predicted Forced Vital Capacity. Measurements and Main Results: In adjusted analyses there were statistically significant independent associations between a) higher asymmetric dimethylarginine, lower Forced Expiratory Volume in 1 second and lower Forced Vital Capacity; and b) lower L-arginine/asymmetric dimethylarginine ratio, lower Forced Expiratory Volume in 1 second, lower Percent Predicted Forced Expiratory Volume in 1 second and lower Percent Predicted Forced Vital Capacity. By contrast, no significant associations were observed between symmetric dimethylarginine and lung function. Conclusions: After adjusting for clinical, demographic, biochemical, and pharmacological confounders, higher serum asymmetric dimethylarginine was independently associated with a reduction in key measures of lung function. Further research is needed to determine if methylarginines predict the decline in lung function

Changes in the bacterial and microeukaryotic communities in the bioreactor upon increasing heavy metal concentrations

Heavy metals are necessary at low concentration for biological activity, but they are often toxic for microorganisms at high concentrations. Amplicon sequencing of 16S rRNA and 18S rRNA was used to investigate changes in the bacterial and microeukaryotic communities in an activated sludge bioreactor incrementally contaminated with nickel (Ni), copper (Cu), and zinc (Zn) with an IC50 value ranging from 0% to 100%, as previously determined, while an uncontaminated bioreactor served as a control. The chemical oxygen demand (COD) was on average 90% in the uncontaminated bioreactor but dropped to 49% when the heavy metal concentration was 100% IC50. The bacterial community in the uncontaminated bioreactor was dominated by Alphaproteobacteria (mostly Agrobacterium and Brevundimonas) when the heavy metal concentrations were low and Bacteroidetes (mostly Sphingobacterium) when the highest amounts of heavy metal concentrations were applied. The members of Ciliophora, Ascomycota, and Basidiomycota alternatively dominated in the uncontaminated bioreactor, while Ascomycota (mostly Fusarium) dominated in the contaminated bioreactor. The results revealed that increased concentrations of Ni, Cu, and Zn altered the bacterial and microeukaryotic communities and some putative metabolic functions

Conversion of a High-Altitude Temperate Forest for Agriculture Reduced Alpha and Beta Diversity of the Soil Fungal Communities as Revealed by a Metabarcoding Analysis

Land-use change is one of the most important drivers of change in biodiversity. Deforestation for grazing or agriculture has transformed large areas of temperate forest in the central highlands of Mexico, but its impact on soil fungal communities is still largely unknown. In this study, we determined how deforestation of a high-altitude temperate forest for cultivation of maize (Zea mays L.) or husbandry altered the taxonomic, phylogenetic, functional, and beta diversity of soil fungal communities using a 18S rRNA metabarcoding analysis. The true taxonomic and phylogenetic diversity at order q = 1, i.e., considering frequent operational taxonomic units, decreased significantly in the arable, but not in the pasture soil. The beta diversity decreased in the order forest > pasture > arable soil. The ordination analysis showed a clear effect of intensity of land-use as the forest soil clustered closer to pasture than to the arable soil. The most abundant fungal phyla in the studied soils were Ascomycota, Basidiomycota, and Mucoromycota. Deforestation more than halved the relative abundance of Basidiomycota; mostly Agaricomycetes, such as Lactarius and Inocybe. The relative abundance of Glomeromycota decreased in the order pasture > forest > arable soil. Symbiotrophs, especially ectomycorrhizal fungi, were negatively affected by deforestation while pathotrophs, especially animal pathogens, were enriched in the pasture and arable soil. Ectomycorrhizal fungi were more abundant in the forest soil as they are usually associated with conifers. Arbuscular mycorrhizal fungi were more abundant in the pasture than in the arable soil as the higher plant diversity provided more suitable hosts. Changes in fungal communities resulting from land-use change can provide important information for soil management and the assessment of the environmental impact of deforestation and conversion of vulnerable ecosystems such as high-altitude temperate forests