3,378 research outputs found

    Draft Genome Sequence of the Yeast Rhodotorula sp. Strain CCFEE 5036, Isolated from McMurdo Dry Valleys, Antarctica.

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    A draft genome sequence was assembled and annotated of the basidiomycetous yeast Rhodotorula sp. strain CCFEE 5036, isolated from Antarctic soil communities. The genome assembly is 19.07 megabases and encodes 6,434 protein-coding genes. The sequence will contribute to understanding the diversity of fungi inhabiting polar regions

    A Computational Theory for the Learning of Equivalence Relations

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    Equivalence relations (ERs) are logical entities that emerge concurrently with the development of language capabilities. In this work we propose a computational model that learns to build ERs by learning simple conditional rules. The model includes visual areas, dopaminergic, and noradrenergic structures as well as prefrontal and motor areas, each of them modeled as a group of continuous valued units that simulate clusters of real neurons. In the model, lateral interaction between neurons of visual structures and top-down modulation of prefrontal/premotor structures over the activity of neurons in visual structures are necessary conditions for learning the paradigm. In terms of the number of neurons and their interaction, we show that a minimal structural complexity is required for learning ERs among conditioned stimuli. Paradoxically, the emergence of the ER drives a reduction in the number of neurons needed to maintain those previously specific stimulus–response learned rules, allowing an efficient use of neuronal resources

    Co-digestion of macroalgae for biogas production: an LCA-based environmental evaluation

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    Algae represent a favourable and potentially sustainable source of biomass for bioenergy-based industrial pathways in the future. The study, performed on a real pilot plant implemented in Augusta (Italy) within the frame of the BioWALK4Biofuels project, aims to figure out whether seaweed (macroalgae) cultivated in near-shore open ponds could be considered a beneficial aspect as a source of biomass for biogas production within the co-digestion with local agricultural biological waste. The LCA results confirm that the analysed A and B scenarios (namely the algae-based co-digestion scenario and agricultural mix feedstock scenario) present an environmental performance more favourable than that achieved with conventional non-renewable-based technologies (specifically natural gas - Scenario C). Results show that the use of seaweed (Scenario A) represent a feasible solution in order to replace classical biomass used for biofuel production from a land-based feedstock. The improvement of the environmental performances is quantifiable on 10% respect to Scenario B, and 38 times higher than Scenario

    SMAUG: a new technique for the deprojection of galaxy clusters

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    This paper presents a new technique for reconstructing the spatial distributions of hydrogen, temperature and metal abundance of a galaxy cluster. These quantities are worked out from the X-ray spectrum, modeled starting from few analytical functions describing their spatial distributions. These functions depend upon some parameters, determined by fitting the model to the observed spectrum. We have implemented this technique as a new model in the XSPEC software analysis package. We describe the details of the method, and apply it to work out the structure of the cluster A1795. We combine the observation of three satellites, exploiting the high spatial resolution of Chandra for the cluster core, the wide collecting area of XMM-Newton for the intermediate regions and the large field of view of Beppo-SAX for the outer regions. We also test the validity and precision of our method by i) comparing its results with those from a geometrical deprojection, ii) examining the spectral residuals at different radii of the cluster and iii) reprojecting the unfolded profiles and comparing them directly to the measured quantities. Our analytical method yields the parameters defining the spatial functions directly from the spectra. Their explicit knowledge allows a straightforward derivation of other indirect physical quantities like the gravitating mass, as well as a fast and easy estimate of the profiles uncertainties.Comment: 24 pages, 11 figures, 3 tables; emulateapj; accepted for publication in the Astrophysical Journa

    Metagenomes in the Borderline Ecosystems of the Antarctic Cryptoendolithic Communities.

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    Antarctic cryptoendolithic communities are microbial ecosystems dwelling inside rocks of the Antarctic desert. We present the first 18 shotgun metagenomes from these communities to further characterize their composition, biodiversity, functionality, and adaptation. Future studies will integrate taxonomic and functional annotations to examine the pathways necessary for life to evolve in the extremes

    Bang-Bang Control of Feeding: Role of Hypothalamic and Satiety Signals

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    Rats, people, and many other omnivores eat in meals rather than continuously. We show by experimental test that eating in meals is regulated by a simple bang-bang control system, an idea foreshadowed by Le Magnen and many others, shown by us to account for a wide range of behavioral data, but never explicitly tested or tied to neurophysiological facts. The hypothesis is simply that the tendency to eat rises with time at a rate determined by satiety signals. When these signals fall below a set point, eating begins, in on–off fashion. The delayed sequelae of eating increment the satiety signals, which eventually turn eating off. Thus, under free conditions, the organism eats in bouts separated by noneating activities. We report an experiment with rats to test novel predictions about meal patterns that are not explained by existing homeostatic approaches. Access to food was systematically but unpredictably interrupted just as the animal tried to start a new meal. A simple bang-bang model fits the resulting meal-pattern data well, and its elements can be identified with neurophysiological processes. Hypothalamic inputs can provide the set point for longer-term regulation carried out by a comparator in the hindbrain. Delayed gustatory and gastrointestinal aftereffects of eating act via the nucleus of the solitary tract and other hindbrain regions as neural feedback governing short-term regulation. In this way, the model forges real links between a functioning feedback mechanism, neuro–hormonal data, and both short-term (meals) and long-term (eating-rate regulation) behavioral data

    Radiative cooling, heating and thermal conduction in M87

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    The crisis of the standard cooling flow model brought about by Chandra and XMM-Newton observations of galaxy clusters, has led to the development of several models which explore different heating processes in order to assess if they can quench the cooling flow. Among the most appealing mechanisms are thermal conduction and heating through buoyant gas deposited in the ICM by AGNs. We combine Virgo/M87 observations of three satellites (Chandra, XMM-Newton and Beppo-SAX) to inspect the dynamics of the ICM in the center of the cluster. Using the spectral deprojection technique, we derive the physical quantities describing the ICM and determine the extra-heating needed to balance the cooling flow assuming that thermal conduction operates at a fixed fraction of the Spitzer value. We assume that the extra-heating is due to buoyant gas and we fit the data using the model developed by Ruszkowski and Begelman (2002). We derive a scale radius for the model of ∌5\sim 5 kpc, which is comparable with the M87 AGN jet extension, and a required luminosity of the AGN of a few×1042few \times 10^{42} erg s−1^{-1}, which is comparable to the observed AGN luminosity. We discuss a scenario where the buoyant bubbles are filled of relativistic particles and magnetic field responsible for the radio emission in M87. The AGN is supposed to be intermittent and to inject populations of buoyant bubbles through a succession of outbursts. We also study the X-ray cool component detected in the radio lobes and suggest that it is structured in blobs which are tied to the radio buoyant bubbles.Comment: 25 pages, 10 figures and 2 tables. Accepted for publication in Ap
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