Transcriptional and genomic parallels between the monoxenous parasite Herpetomonas muscarum and Leishmania

Trypanosomatid parasites are causative agents of important human and animal diseases such as sleeping sickness and leishmaniasis. Most trypanosomatids are transmitted to their mammalian hosts by insects, often belonging to Diptera (or true flies). These are called dixenous trypanosomatids since they infect two different hosts, in contrast to those that infect just insects (monoxenous). However, it is still unclear whether dixenous and monoxenous trypanosomatids interact similarly with their insect host, as fly-monoxenous trypanosomatid interaction systems are rarely reported and under-studied–despite being common in nature. Here we present the genome of monoxenous trypanosomatid Herpetomonas muscarum and discuss its transcriptome during in vitro culture and during infection of its natural insect host Drosophila melanogaster. The H. muscarum genome is broadly syntenic with that of human parasite Leishmania major. We also found strong similarities between the H. muscarum transcriptome during fruit fly infection, and those of Leishmania during sand fly infections. Overall this suggests Drosophila-Herpetomonas is a suitable model for less accessible insect-trypanosomatid host-parasite systems such as sand fly-Leishmania

Machine learning uncovers the most robust self-report predictors of relationship quality across 43 longitudinal couples studies

Given the powerful implications of relationship quality for health and well-being, a central mission of relationship science is explaining why some romantic relationships thrive more than others. This large-scale project used machine learning (i.e., Random Forests) to 1) quantify the extent to which relationship quality is predictable and 2) identify which constructs reliably predict relationship quality. Across 43 dyadic longitudinal datasets from 29 laboratories, the top relationship-specific predictors of relationship quality were perceived-partner commitment, appreciation, sexual satisfaction, perceived-partner satisfaction, and conflict. The top individual-difference predictors were life satisfaction, negative affect, depression, attachment avoidance, and attachment anxiety. Overall, relationship-specific variables predicted up to 45% of variance at baseline, and up to 18% of variance at the end of each study. Individual differences also performed well (21% and 12%, respectively). Actor-reported variables (i.e., own relationship-specific and individual-difference variables) predicted two to four times more variance than partner-reported variables (i.e., the partner’s ratings on those variables). Importantly, individual differences and partner reports had no predictive effects beyond actor-reported relationship-specific variables alone. These findings imply that the sum of all individual differences and partner experiences exert their influence on relationship quality via a person’s own relationship-specific experiences, and effects due to moderation by individual differences and moderation by partner-reports may be quite small. Finally, relationship-quality change (i.e., increases or decreases in relationship quality over the course of a study) was largely unpredictable from any combination of self-report variables. This collective effort should guide future models of relationships

Marine Tar Residues: a Review

Abstract Marine tar residues originate from natural and anthropogenic oil releases into the ocean environment and are formed after liquid petroleum is transformed by weathering, sedimentation, and other processes. Tar balls, tar mats, and tar patties are common examples of marine tar residues and can range in size from millimeters in diameter (tar balls) to several meters in length and width (tar mats). These residues can remain in the ocean envi-ronment indefinitely, decomposing or becoming buried in the sea floor. However, in many cases, they are transported ashore via currents and waves where they pose a concern to coastal recreation activities, the seafood industry and may have negative effects on wildlife. This review summarizes the current state of knowledge on marine tar residue formation, transport, degradation, and distribution. Methods of detection and removal of marine tar residues and their possible ecological effects are discussed, in addition to topics of marine tar research that warrant further investigation. Emphasis is placed on ben-thic tar residues, with a focus on the remnants of the Deepwater Horizon oil spill in particular, which are still affecting the northern Gulf of Mexico shores years after the leaking submarine well was capped

Green and hawksbill turtles in the Lesser Antilles demonstrate behavioural plasticity in inter-nesting behaviour and post-nesting migration

Satellite transmitters were deployed on three green turtles, Chelonia mydas, and two hawksbill turtles, Eretmochelys imbricata, nesting in the Lesser Antilles islands, Caribbean, between 2005-2007 to obtain preliminary information about the inter-nesting, migratory and foraging habitats in the region. Despite the extremely small dataset, both year-round residents and migrants were identified; specifically (1) two green turtles used local shallow coastal sites within 50 km of the nesting beach during all of their inter-nesting periods and then settled at these sites on completion of their breeding seasons, (2) one hawksbill turtle travelled 200 km westward before reversing direction and settling within 50 km of the original nesting beach and (3) one green and one hawksbill turtle initially nested at the proximate site, before permanently relocating to an alternative nesting site over 190 km distant. A lack of nesting beach fidelity was supported by flipper tag datasets for the region. Tagging datasets from 2002-2012 supported that some green and hawksbill individuals exhibit low fidelity to nesting beaches, whereas other females exhibited a high degree of fidelity (26 turtles tagged, 40.0km maximum distance recorded from original nesting beach). Individual turtles nesting on St Eustatius and St Maarten appear to exhibit behavioural plasticity in their inter-nesting behaviour and post-nesting migration routes in the Eastern Caribbean. The tracking and tagging data combined indicate that some of the green and hawksbill females that nest in the Lesser Antilles Islands are year-round residents, while others may nest and forage at alternative sites. Thus, continued year-round protection of these islands and implementation of protection programmes in nearby islands could contribute towards safeguarding the green and hawksbill populations of the region

Studies on a strain of raspberry ringspot virus occurring in England

RESP-513

Deepwater marine litter densities and compsoition from submersible video-gransects around the ABC-islands, Dutch Caribbean

Baseline data on anthropogenic seafloor debris contamination in the year 2000 is provided for 24 submersible video transects at depths of 80–900 m, off the Dutch ABC-islands (Aruba, Bonaire, Curaçao), in the southeastern Caribbean Sea. In total, 202 objects were documented from a combined 21,184 m of transect, ranging from sandy lower island-slope to rocky upper island-slope habitat. Debris densities differed significantly with depth. Highest debris accumulation (0.459 items 100 m-2 or 4590 items per km2) occurred at depths of 300–600 m on more shallow-sloping (20–30°) sand and silt bottoms. The overall average debris density was 0.27 objects per 100 m2 (or 2700 items per km2), which is an order of magnitude higher than most other deepwater debris studies. What we describe may be representative for other small, populated, steep volcanic Caribbean islands. Food and beverage-related items were the single largest usage category identified (44% of objects; mostly glass beverage bottles)

Deepwater marine litter densities and composition from submersible video-transects around the ABC-islands, Dutch Caribbean

Baseline data on anthropogenic seafloor debris contamination in the year 2000 is provided for 24 submersible video transects at depths of 80–900 m, off the Dutch ABC-islands (Aruba, Bonaire, Curaçao), in the southeastern Caribbean Sea. In total, 202 objects were documented from a combined 21,184 m of transect, ranging from sandy lower island-slope to rocky upper island-slope habitat. Debris densities differed significantly with depth. Highest debris accumulation (0.459 items 100 m−2 or 4590 items per km2) occurred at depths of 300–600 m on more shallow-sloping (20–30°) sand and silt bottoms. The overall average debris density was 0.27 objects per 100 m2 (or 2700 items per km2), which is an order of magnitude higher than most other deepwater debris studies. What we describe may be representative for other small, populated, steep volcanic Caribbean islands. Food and beverage-related items were the single largest usage category identified (44% of objects; mostly glass beverage bottles)

High peak settlement of Diadema antillarum on different artificial collectors in the Eastern Caribbean

The massive die-off of the herbivorous sea urchin Diadema antillarum in 1983 and 1984 resulted in phase shifts on Caribbean coral reefs, where macroalgae replaced coral as the most dominant benthic group. Since then, D. antillarum recovery has been slow to non-existent on most reefs. Studying settlement rates can provide insight into the mechanisms constraining the recovery of D. antillarum, while efficient settlement collectors can be used to identify locations with high settlement rates and to collect settlers for restoration practices. The aim of this study was to compare pre and post die-off settlement rates and to determine possible settlement peaks in the Eastern Caribbean island of St. Eustatius. Additionally, we aimed to determine the effectiveness and reproducibility of five different settlement collectors for D. antillarum. D. antillarum settlement around St. Eustatius was highest in May, June and August and low during the rest of the study. Before the die-off, settlement recorded for Curaçao was high throughout the year and was characterized by multiple settlement peaks. Even though peak settlement rates in this study were in the same order of magnitude as in Curaçao before the die-off, overall yearly settlement rates around St. Eustatius were still lower. As no juvenile or adult D. antillarum were observed on the reefs around the settlement collectors, it is likely that other factors are hindering the recovery of the island's D. antillarum populations. Of all five materials tested, bio ball collectors were the most effective and reproducible method to monitor D. antillarum settlement. Panels yielded the least numbers of settlers, which can partly be explained by their position close to the seabed. Settler collection was higher in mid-water layers compared to close to the bottom and maximized when strings of bio balls were used instead of clumps. We recommend research into the feasibility of aiding D. antillarum recovery by providing suitable settlement substrate during the peak of the settlement season and adequate shelter to increase post-settlement survival of settlers. The bio ball collectors could serve as a suitable settlement substrate for this new approach of assisted natural recovery