Probing topology by "heating": Quantized circular dichroism in ultracold atoms

We reveal an intriguing manifestation of topology, which appears in the depletion rate of topological states of matter in response to an external drive. This phenomenon is presented by analyzing the response of a generic 2D Chern insulator subjected to a circular time-periodic perturbation: due to the system's chiral nature, the depletion rate is shown to depend on the orientation of the circular shake. Most importantly, taking the difference between the rates obtained from two opposite orientations of the drive, and integrating over a proper drive-frequency range, provides a direct measure of the topological Chern number of the populated band ($\nu$): this "differential integrated rate" is directly related to the strength of the driving field through the quantized coefficient $\eta_0\!=\!\nu /\hbar^2$. Contrary to the integer quantum Hall effect, this quantized response is found to be non-linear with respect to the strength of the driving field and it explicitly involves inter-band transitions. We investigate the possibility of probing this phenomenon in ultracold gases and highlight the crucial role played by edge states in this effect. We extend our results to 3D lattices, establishing a link between depletion rates and the non-linear photogalvanic effect predicted for Weyl semimetals. The quantized circular dichroism revealed in this work designates depletion-rate measurements as a universal probe for topological order in quantum matter.Comment: 10 pages, 5 figures (including Sup. Mat.). Revised version, accepted for publicatio

The Environment Recording Unit in coral skeletons – a synthesis of structural and chemical evidences for a biochemically driven, stepping-growth process in fibres

International audienceThis paper gathers a series of structural and biochemical in situ characterizations carried out to improve our knowledge of the fine scale growth patterns of fibres in coral skeletons. The resulting data show a clear correspondence between the mineral subunits of fibres and the spatial distribution of organic macromolecules. New observations using atomic force microscope confirm the close relationship between mineral and organic phases at the nanometre scale. Synthesis of these data results in a significant change in our concept of the mineralization process in coral skeletons. In contrast to the usual view of an aggregate of purely mineral units independently growing by simple chemical precipitation, coral fibres appear to be fully controlled structures. Their growth process is based on cyclic secretion of mineralizing compounds by the polyp basal ectoderm. These biochemical components of the coral fibres, in which sulfated acidic proteoglycans probably play a major role, are repeatedly produced (proteoglycans are those glycoproteins whose carbohydrate moieties consist of long unbranched chains of sulfated amino sugars). This results in a stepping growth mode of fibres and a layered global organization of coral skeletons. Therefore, in contrast to the widely accepted geochemical interpretation, we propose a fibre growth model that places coral skeletons among the typical ''matrix mediated'' structures. The crystal-like fibres are built by superimposition of few micron-thick growth layers. A biomineralization cycle starts by the secretion of a mineralizing matrix and the final step is the crystallization phase, during which mineral material grows onto the organic framework. Thus, each growth layer is the actual Environment Recording Unit. From a practical standpoint, these results may contribute to develop a new high resolution approach of the environment recording by coral skeletons

The environment recording unit in coral skeletons: structural and chemical evidences of a biochemically driven stepping-growth process in coral fibres

International audienceTo improve our understanding of the environment recording by scleractinian corals, a detailed study of the skeleton microstructure has been carried out. A series of physico-chemical in situ characterizations was made, an approach that provides us with structural and biochemical information at the micrometric and nanometric scales. Gathering of these data results in a significant change in our concept of the growth of coral skeletons. In contrast to the usual view of an aggregate of purely mineral units (the coral fibres) independently growing by a simple chemical precipitation, coral skeletons appear to be biochemically controlled structures. Both structural and biochemical data reveal the micron-scaled stepping growth-mode of fibres, and its global coordination. In this process, sulfated acidic proteoglycans probably play a major role, due to their ability to create polymeric frameworks. Atomic force microscopy confirms the close relationship of organic and mineral phases at the nanometric scale. A new microstructural model of coral skeleton formation is proposed, that places coral skeletons among the typical "matrix mediated structures". From a practical standpoint, these results may contribute to develop a new high resolution approach in the study of paleoenvironments

Oxygen isotope equilibrium in brachiopod shell fibres in the context of biological control

No abstract available

Storage Device Sizing for a Hybrid Railway Traction System by Means of Bicausal Bond Graphs

In this paper, the application of bicausal bond graphs for system design in electrical engineering is emphasized. In particular, it is shown how this approach is very useful for model inversion and parameter dimensioning. To illustrate these issues, a hybrid railway traction device is considered as a case study. The synthesis of a storage device (a supercapacitor) included in this system is then discussed

Description of two Enterococcus strains isolated from traditional Peruvian artisanal-produced cheeses with a bacteriocin-like inhibitory activity

The aim of this work was to isolate and to characterize strains of lactic acid bacteria (LAB) with bacteriocin-like inhibitory activity from 27 traditional cheeses artisanal-produced obtained from different Peruvian regions. Twenty Gram+ and catalasenegative strains among 2,277 isolates exhibited bacteriocin-like inhibitory activity against Listeria monocytogenes CWBIB2232 as target strain. No change in inhibitory activity was observed after organic acid neutralization and treatment with catalase of the cell-free supernatant (CFS). The proteinic nature of the antimicrobial activity was confirmed for the twenty LAB strains by proteolytic digestion of the CFS. Two strains, CWBI-B1431 and CWBI-B1430, with the best antimicrobial activity were selected for further researches. These strains were taxonomically identified by phenotypic and genotypic analyses as Enterococcus mundtii (CWBI-B1431) and Enterococcus faecium (CWBI-B1430). The two strains were sensitive to vancomycin (MIC 2 μg.ml-1) and showed absence of haemolysis

Detection of Zak phases and topological invariants in a chiral quantum walk of twisted photons

Topological insulators are fascinating states of matter exhibiting protected edge states and robust quantized features in their bulk. Here, we propose and validate experimentally a method to detect topological properties in the bulk of one-dimensional chiral systems. We first introduce the mean chiral displacement, and we show that it rapidly approaches a multiple of the Zak phase in the long time limit. Then we measure the Zak phase in a photonic quantum walk, by direct observation of the mean chiral displacement in its bulk. Next, we measure the Zak phase in an alternative, inequivalent timeframe, and combine the two windings to characterize the full phase diagram of this Floquet system. Finally, we prove the robustness of the measure by introducing dynamical disorder in the system. This detection method is extremely general, as it can be applied to all one-dimensional platforms simulating static or Floquet chiral systems.Comment: 10 pages, 7 color figures (incl. appendices) Close to the published versio

Comparison of Eight Methods for the Extraction of Bacillus atrophaeus Spore DNA from Eleven Common Interferents and a Common Swab

Eight DNA extraction products or methods (Applied Biosystems PrepFiler Forensic DNA Extraction Kit; Bio-Rad Instagene Only, Bio-Rad Instagene & Spin Column Purification; EpiCentre MasterPure DNA & RNA Kit; FujiFilm QuickGene Mini80; Idaho Technologies 1-2-3 Q-Flow Kit; MoBio UltraClean Microbial DNA Isolation Kit; Sigma Extract-N-Amp Plant and Seed Kit) were adapted to facilitate extraction of DNA under BSL3 containment conditions. DNA was extracted from 12 common interferents or sample types, spiked with spores of Bacillus atropheaus. Resulting extracts were tested by real-time PCR. No one method was the best, in terms of DNA extraction, across all sample types. Statistical analysis indicated that the PrepFiler method was the best method from six dry powders (baking, biological washing, milk, plain flour, filler and talcum) and one solid (Underarm deodorant), the UltraClean method was the best from four liquids (aftershave, cola, nutrient broth, vinegar), and the MasterPure method was the best from the swab sample type. The best overall method, in terms of DNA extraction, across all sample types evaluated was the UltraClean method

Matrix‐assisted laser desorption ionization time‐of‐flight mass spectrometry for fast and accurate identification of clinically relevant Aspergillus species

AbstractNew Aspergillus species have recently been described with the use of multilocus sequencing in refractory cases of invasive aspergillosis. The classical phenotypic identification methods routinely used in clinical laboratories failed to identify them adequately. Some of these Aspergillus species have specific patterns of susceptibility to antifungal agents, and misidentification may lead to inappropriate therapy. We developed a matrix‐assisted laser desorption ionization time‐of‐flight (MALDI‐TOF) mass spectrometry (MS)‐based strategy to adequately identify Aspergillus species to the species level. A database including the reference spectra of 28 clinically relevant species from seven Aspergillus sections (five common and 23 unusual species) was engineered. The profiles of young and mature colonies were analysed for each reference strain, and species‐specific spectral fingerprints were identified. The performance of the database was then tested on 124 clinical and 16 environmental isolates previously characterized by partial sequencing of the β‐tubulin and calmodulin genes. One hundred and thirty‐eight isolates of 140 (98.6%) were correctly identified. Two atypical isolates could not be identified, but no isolate was misidentified (specificity: 100%). The database, including species‐specific spectral fingerprints of young and mature colonies of the reference strains, allowed identification regardless of the maturity of the clinical isolate. These results indicate that MALDI‐TOF MS is a powerful tool for rapid and accurate identification of both common and unusual species of Aspergillus. It can give better results than morphological identification in clinical laboratories