Rural waste generation: a geographical survey at local scale

"The paper examines the per capita waste generation rates from from rural areas of Neamț County (Romania) using thematic cartography. Geographical approach of this issue is difficult because the lack of a geostatistic database at commune scale. Spatial analysis of waste indicators reveals several disparities between localities. Comparability of data between communes located in various geographical conditions must be carrefully made according to local waste management systems. Several dysfunctionalities are outlined in order to compare these results, on the one hand, between localities and on the one hand, between recent years. Geographical analysis of waste generation rates is imperative for a proper monitoring of this sector. Data from 2009, 2010 and 2012 shows that rural waste management is in a full process of change towards a more organized, stable and efficient system." (author's abstract

Mapping and characterization of structural variation in 17,795 human genomes

A key goal of whole-genome sequencing for studies of human genetics is to interrogate all forms of variation, including single-nucleotide variants, small insertion or deletion (indel) variants and structural variants. However, tools and resources for the study of structural variants have lagged behind those for smaller variants. Here we used a scalable pipeline1 to map and characterize structural variants in 17,795 deeply sequenced human genomes. We publicly release site-frequency data to create the largest, to our knowledge, whole-genome-sequencing-based structural variant resource so far. On average, individuals carry 2.9 rare structural variants that alter coding regions; these variants affect the dosage or structure of 4.2 genes and account for 4.0–11.2% of rare high-impact coding alleles. Using a computational model, we estimate that structural variants account for 17.2% of rare alleles genome-wide, with predicted deleterious effects that are equivalent to loss-of-function coding alleles; approximately 90% of such structural variants are noncoding deletions (mean 19.1 per genome). We report 158,991 ultra-rare structural variants and show that 2% of individuals carry ultra-rare megabase-scale structural variants, nearly half of which are balanced or complex rearrangements. Finally, we infer the dosage sensitivity of genes and noncoding elements, and reveal trends that relate to element class and conservation. This work will help to guide the analysis and interpretation of structural variants in the era of whole-genome sequencing

Degradation of mangrove leaf litter by the tropical sesarmid crab Chiromanthes onychophorum

In high-diversity tropical mangrove swamps, the relationship between the breakdown to detritus of mangrove plant litter and secondary production of associated estuaries is little understood. This study examined one step in this relationship, the breakdown of mangrove leaf litter to detrital-sized particles by the sesarmid crab Chiromanthes onychophorum , locally very abundant in mangrove swamps of peninsular Malaysia. Contents of the proventriculus (stomach) and of the posterior hindgut, including rectum, were analyzed and particle sizes were measured. Gut contents consisted of more than 95% by volume of mangrove leaf fragments. Particles in the hindgut were of smaller mean size than those in the proventriculus. It is concluded that C. onychophorum consumes fallen leaves or their fragments, incompletely digests them, and returns them to the environment as fecal matter in a more finely-divided state than when they were ingested. C. onychophorum may therefore be a significant agent of mangrove leaf degradation to detrital-sized particles in swamp areas where it is abundant.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/46633/1/227_2004_Article_BF00455032.pd