5,911 research outputs found
Calcium isotopic composition of high-latitude proxy carrier Neogloboquadrina pachyderma (sin.)
The accurate reconstruction of sea surface temperature (SST) history in climate-sensitive regions (e.g. tropical and polar oceans) became a challenging task in palaeoceanographic research. Biogenic shell carbonate SST proxies successfully developed for tropical regions often fail in cool water environments. Their major regional shortcomings and the cryptic diversity now found within the major high latitude proxy carrier Neogloboquadrina pachyderma (sin.) highlight an urgent need to explore complementary SST proxies for these cool-water regions. Here we incorporate the genetic component into a calibration study of a new SST proxy for the high latitudes. We found that the calcium isotopic composition (δ44/40Ca) of calcite from genotyped net catches and core-top samples of the planktonic foraminifera Neogloboquadrina pachyderma (sin.) is related to temperature and unaffected by genetic variations. The temperature sensitivity has been found to be 0.17 (±0.02)‰ per 1°C, highlighting its potential for downcore applications in open marine cool-water environments. Our results further indicate that in extreme polar environments, below a critical threshold temperature of 2.0 (±0.5)°C associated with salinities below 33.0 (±0.5)‰, a prominent shift in biomineralization affects the δ44/40Ca of genotyped and core-top N. pachyderma (sin.), becoming insensitive to temperature. These findings highlight the need of more systematic calibration studies on single planktonic foraminiferal species in order to unravel species-specific factors influencing the temperature sensitivity of Ca isotope fractionation and to validate the proxies' applicability
Alien Registration- Mackinnon, Elvira D. (Brownville, Piscataquis County)
https://digitalmaine.com/alien_docs/11242/thumbnail.jp
Hidden breakpoints in genome alignments
During the course of evolution, an organism's genome can undergo changes that
affect the large-scale structure of the genome. These changes include gene
gain, loss, duplication, chromosome fusion, fission, and rearrangement. When
gene gain and loss occurs in addition to other types of rearrangement,
breakpoints of rearrangement can exist that are only detectable by comparison
of three or more genomes. An arbitrarily large number of these "hidden"
breakpoints can exist among genomes that exhibit no rearrangements in pairwise
comparisons.
We present an extension of the multichromosomal breakpoint median problem to
genomes that have undergone gene gain and loss. We then demonstrate that the
median distance among three genomes can be used to calculate a lower bound on
the number of hidden breakpoints present. We provide an implementation of this
calculation including the median distance, along with some practical
improvements on the time complexity of the underlying algorithm.
We apply our approach to measure the abundance of hidden breakpoints in
simulated data sets under a wide range of evolutionary scenarios. We
demonstrate that in simulations the hidden breakpoint counts depend strongly on
relative rates of inversion and gene gain/loss. Finally we apply current
multiple genome aligners to the simulated genomes, and show that all aligners
introduce a high degree of error in hidden breakpoint counts, and that this
error grows with evolutionary distance in the simulation. Our results suggest
that hidden breakpoint error may be pervasive in genome alignments.Comment: 13 pages, 4 figure
Discovery of mafic impact melt in the center of the Vredefort dome:archetype for continental residua of early Earth cratering?
ALMA Observations of Circumnuclear Disks in Early Type Galaxies: 12CO(2-1) and Continuum Properties
We present results from an Atacama Large Millimeter/submillimeter Array
(ALMA) Cycle 2 program to map CO(2-1) emission in nearby early-type galaxies
(ETGs) that host circumnuclear gas disks. We obtained resolution
Band 6 observations of seven ETGs selected on the basis of dust disks in Hubble
Space Telescope images. We detect CO emission in five at high signal-to-noise
ratio with the remaining two only faintly detected. All CO emission is
coincident with the dust and is in dynamically cold rotation. Four ETGs show
evidence of rapid central rotation; these are prime candidates for
higher-resolution ALMA observations to measure the black hole masses. In this
paper we focus on the molecular gas and continuum properties. Total gas masses
and H column densities for our five CO-bright galaxies are on average
and cm over the kpc-scale
disks, and analysis suggests that these disks are stabilized against
gravitational fragmentation. The continuum emission of all seven galaxies is
dominated by a central, unresolved source, and in five we also detect a
spatially extended component. The 230 GHz nuclear continua are modeled as
power laws ranging from to within the
observed frequency band. The extended continuum profiles of the two
radio-bright (and CO-faint) galaxies are roughly aligned with their radio jet
and suggests resolved synchrotron jets. The extended continua of the CO-bright
disks are coincident with optically thick dust absorption and have spectral
slopes that are consistent with thermal dust emission.Comment: 20 pages, 10 figures; accepted for publication in Ap
High-dimensional quantum dynamics of adsorption and desorption of H at Cu(111)
We performed high-dimensional quantum dynamical calculations of the
dissociative adsorption and associative desorption of hydrogen on Cu(111). The
potential energy surface (PES) is obtained from density functional theory
calculations. Two regimes of dynamics are found, at low energies sticking is
determined by the minimum energy barrier, at high energies by the distribution
of barrier heights. Experimental results are well-reproduced qualitatively, but
some quantitative discrepancies are identified as well.Comment: 4 two column pages, revtex, 4 figures, to appear in Phys. Rev. Let
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