Characterizing anomalous diffusion in crowded polymer solutions and gels over five decades in time with variable-lengthscale fluorescence correlation spectroscopy

The diffusion of macromolecules in cells and in complex fluids is often found to deviate from simple Fickian diffusion. One explanation offered for this behavior is that molecular crowding renders diffusion anomalous, where the mean-squared displacement of the particles scales as $\langle r^2 \rangle \propto t^{\alpha}$ with $\alpha < 1$. Unfortunately, methods such as fluorescence correlation spectroscopy (FCS) or fluorescence recovery after photobleaching (FRAP) probe diffusion only over a narrow range of lengthscales and cannot directly test the dependence of the mean-squared displacement (MSD) on time. Here we show that variable-lengthscale FCS (VLS-FCS), where the volume of observation is varied over several orders of magnitude, combined with a numerical inversion procedure of the correlation data, allows retrieving the MSD for up to five decades in time, bridging the gap between diffusion experiments performed at different lengthscales. In addition, we show that VLS-FCS provides a way to assess whether the propagator associated with the diffusion is Gaussian or non-Gaussian. We used VLS-FCS to investigate two systems where anomalous diffusion had been previously reported. In the case of dense cross-linked agarose gels, the measured MSD confirmed that the diffusion of small beads was anomalous at short lengthscales, with a cross-over to simple diffusion around $\approx 1~\mu$m, consistent with a caged diffusion process. On the other hand, for solutions crowded with marginally entangled dextran molecules, we uncovered an apparent discrepancy between the MSD, found to be linear, and the propagators at short lengthscales, found to be non-Gaussian. These contradicting features call to mind the "anomalous, yet Brownian" diffusion observed in several biological systems, and the recently proposed "diffusing diffusivity" model

Background Oriented Schlieren (BOS) of a Supersonic Aircraft In Flight

This article describes the development and use of Background Oriented Schlieren on a full-scale supersonic jet in flight. A series of flight tests was performed in October, 2014 and February 2015 using the flora of the desert floor in the Supersonic Flight Corridor on the Edwards Air Force Base as a background. Flight planning was designed based on the camera resolution, the mean size and color of the predominant plants, and the navigation and coordination of two aircraft. Software used to process the image data was improved with additional utilities. The planning proved to be effective and the vast majority of the passes of the target aircraft were successfully recorded. Results were obtained that are the most detailed schlieren imagery of an aircraft in flight to date

D-Terms from Generalized NS-NS Fluxes in Type II

Orientifolds of type II string theory admit a certain set of generalized NS-NS fluxes, including not only the three-form field strength H, but also metric and non-geometric fluxes, which are related to H by T-duality. We describe in general how these fluxes appear as parameters of an effective N=1 supergravity theory in four dimensions, and in particular how certain generalized NS-NS fluxes can act as charges for R-R axions, leading to D-term contributions to the effective scalar potential. We illustrate these phenomena in type IIB with the example of a certain orientifold of T^6/Z_4.Comment: 31+1 pages, uses utarticle.cls; v2: references adde

Gaugino Condensation in M-theory on S^1/Z_2

In the low energy limit of for M-theory on S^1/Z_2, we calculate the gaugino condensate potential in four dimensions using the background solutions due to Horava. We show that this potential is free of delta-function singularities and has the same form as the potential in the weakly coupled heterotic string. A general flux quantization rule for the three-form field of M-theory on S^1/Z_2 is given and checked in certain limiting cases. This rule is used to fix the free parameter in the potential originating from a zero mode of the form field. Finally, we calculate soft supersymmetry breaking terms. We find that corrections to the Kahler potential and the gauge kinetic function, which can be large in the strongly coupled region, contribute significantly to certain soft terms. In particular, for supersymmetry breaking in the T-modulus direction, the small values of gaugino masses and trilinear couplings that occur in the weakly coupled, large radius regime are enhanced to order m_3/2 in M-theory. The scalar soft masses remain small even, in the strong coupling M-theory limit.Comment: 20 pages, LATE

Cosmological Challenges in Theories with Extra Dimensions and Remarks on the Horizon Problem

We consider the cosmology that results if our observable universe is a 3-brane in a higher dimensional universe. In particular, we focus on the case where our 3-brane is located at the $Z_2$ symmetry fixed plane of a $Z_2$ symmetric five-dimensional spacetime, as in the Ho\v{r}ava-Witten model compactified on a Calabi-Yau manifold. As our first result, we find that there can be substantial modifications to the standard Friedmann-Robertson-Walker (FRW) cosmology; as a consequence, a large class of such models is observationally inconsistent. In particular, any relationship between the Hubble constant and the energy density on our brane is possible, including (but not only) FRW. Generically, due to the existence of the bulk and the boundary conditions on the orbifold fixed plane, the relationship is not FRW, and hence cosmological constraints coming from big bang nucleosynthesis, structure formation, and the age of the universe difficult to satisfy. We do wish to point out, however, that some specific choices for the bulk stress-energy tensor components do reproduce normal FRW cosmology on our brane, and we have constructed an explicit example. As our second result, for a broad class of models, we find a somewhat surprising fact: the stabilization of the radius of the extra dimension and hence the four dimensional Planck mass requires unrealistic fine-tuning of the equation of state on our 3-brane. In the last third of the paper, we make remarks about causality and the horizon problem that apply to {\it any} theory in which the volume of the extra dimension determines the four-dimensional gravitational coupling. We point out that some of the assumptions that lead to the usual inflationary requirements are modified.Comment: 15 page REVTeX file; to appear in Phys. Rev. D; clarified the statement of being able to obtain any power dependence of the Hubble expansion rate on the energy density; added reference

Scalar Three-point Functions in a CDL Background

Motivated by the FRW-CFT proposal by Freivogel, Sekino, Susskind and Yeh, we compute the three-point function of a scalar field in a Coleman-De Luccia instanton background. We first compute the three-point function of the scalar field making only very mild assumptions about the scalar potential and the instanton background. We obtain the three-point function for points in the FRW patch of the CDL instanton and take two interesting limits; the limit where the three points are near the boundary of the hyperbolic slices of the FRW patch, and the limit where the three points lie on the past lightcone of the FRW patch. We expand the past lightcone three-point function in spherical harmonics. We show that the near boundary limit expansion of the three-point function of a massless scalar field exhibits conformal structure compatible with FRW-CFT when the FRW patch is flat. We also compute the three-point function when the scalar is massive, and explain the obstacles to generalizing the conjectured field-operator correspondence of massless fields to massive fields.Comment: 42 pages + appendices, 10 figures; v2, v3: minor correction

Toward the End of Time

The null-brane space-time provides a simple model of a big crunch/big bang singularity. A non-perturbative definition of M-theory on this space-time was recently provided using matrix theory. We derive the fermion couplings for this matrix model and study the leading quantum effects. These effects include particle production and a time-dependent potential. Our results suggest that as the null-brane develops a big crunch singularity, the usual notion of space-time is replaced by an interacting gluon phase. This gluon phase appears to constitute the end of our conventional picture of space and time.Comment: 31 pages, reference adde

Nonperturbative studies of supersymmetric matrix quantum mechanics with 4 and 8 supercharges at finite temperature

We investigate thermodynamic properties of one-dimensional U(N) supersymmetric gauge theories with 4 and 8 supercharges in the planar large-N limit by Monte Carlo calculations. Unlike the 16 supercharge case, the threshold bound state with zero energy is widely believed not to exist in these models. This led A.V. Smilga to conjecture that the internal energy decreases exponentially at low temperature instead of decreasing with a power law. In the 16 supercharge case, the latter behavior was predicted from the dual black 0-brane geometry and confirmed recently by Monte Carlo calculations. Our results for the models with 4 and 8 supercharges indeed support the exponential behavior, revealing a qualitative difference from the 16 supercharge case.Comment: 16 pages, 7 figures, LaTeX2e, minor corrections in section 3, final version accepted in JHE

Fluorescence correlation spectroscopy with sub-diffraction-limited resolution using near-field optical probes

We report fluorescence correlation spectroscopy (FCS) measurements using near-field scanning optical microscopy (NSOM) probes to produce a sub-diffraction-limited observation area. An order of magnitude reduction in the area compared to confocal FCS has been achieved. We also demonstrate a simple means to model the autocorrelation decay due to diffusion within the excitation profile at the NSOM probe aperture. The use of probes with smaller apertures is expected to provide an additional order of magnitude reduction in the observation area, thus enabling the study of cellular membranes with higher concentrations of fluorophores than is currently possible with diffraction-limited techniques