32 research outputs found
Critical evaluation of the effect of anharmonicity and dispersion interactions using density functional theory on structural and spectroscopic properties of selected inorganic compounds
Density functional theory (DFT) in its modern Kohn-Sham formulation provides an efficient framework for the accurate characterization of the properties of many-electron systems in solid-state physics and in chemistry. In this thesis, DFT has been applied to the prediction of the structural and spectroscopic properties of selected inorganic compounds
Recent Developments in Noncovalent Interaction Methods
The development of noncovalent interaction methods has been a long journey since the first use 40 years ago. Enormous efforts have been made, starting from a simple semiempirical approach to a complex wavefunction approach. In this review, we will first discuss a classification of molecular forces, followed by the recent method development of noncovalent interactions. Mainly, we will focus on dispersion-corrected methods in density functional theory, semiempirical molecular orbital, and wavefunction-based approaches
Quantitative Assessment of Tetrel Bonding Utilizing Vibrational Spectroscopy
A set of 35 representative neutral and charged tetrel complexes was investigated with the objective of finding the factors that influence the strength of tetrel bonding involving single bonded C, Si, and Ge donors and double bonded C or Si donors. For the first time, we introduced an intrinsic bond strength measure for tetrel bonding, derived from calculated vibrational spectroscopy data obtained at the CCSD(T)/aug-cc-pVTZ level of theory and used this measure to rationalize and order the tetrel bonds. Our study revealed that the strength of tetrel bonds is affected by several factors, such as the magnitude of the σ-hole in the tetrel atom, the negative electrostatic potential at the lone pair of the tetrel-acceptor, the positive charge at the peripheral hydrogen of the tetrel-donor, the exchange-repulsion between the lone pair orbitals of the peripheral atoms of the tetrel-donor and the heteroatom of the tetrel-acceptor, and the stabilization brought about by electron delocalization. Thus, focusing on just one or two of these factors, in particular, the σ-hole description can only lead to an incomplete picture. Tetrel bonding covers a range of −1.4 to −26 kcal/mol, which can be strengthened by substituting the peripheral ligands with electron-withdrawing substituents and by positively charged tetrel-donors or negatively charged tetrel-acceptors
A Story of Three Levels of Sophistication in SCF/KS-DFT Orbital Optimization Procedures
In this work, three versions of self-consistent field/Kohn-Sham density functional theory (SCF/KS-DFT) orbital optimization are described and benchmarked. The methods are a modified version of the geometry version of the direct inversion in the iterative subspace approach (which we call r-GDIIS), the modified restricted step rational function optimization method (RS-RFO), and the novel subspace gradient-enhanced Kriging method combined with restricted variance optimization (S-GEK/RVO). The modifications introduced are aimed at improving the robustness and computational scaling of the procedures. In particular, the subspace approach in S-GEK/RVO allows the application to SCF/KS-DFT optimization of a machine learning technique that has proven to be successful in geometry optimizations. The performance of the three methods is benchmarked for a large number of small- to medium-sized organic molecules, at equilibrium structures and close to a transition state, and a second set of molecules containing closed- and open-shell transition metals. The results indicate the importance of the resetting technique in boosting the performance of the r-GDIIS procedure. Moreover, it is demonstrated that already at the inception of the subspace version of GEK to optimize SCF wave functions, it displays superior and robust convergence properties as compared to those of the standard state-of-the-art SCF/KS-DFT optimization methods
Assessing the Intrinsic Strengths of Ion-Solvent and Solvent-Solvent Interactions for Hydrated Mg2+ Clusters
Information resulting from a comprehensive investigation into the intrinsic strengths of hydrated divalent magnesium clusters is useful for elucidating the role of aqueous solvents on the Mg2+ ion, which can be related to those in bulk aqueous solution. However, the intrinsic Mg-O and intermolecular hydrogen bond interactions of hydrated magnesium ion clusters have yet to be quantitatively measured. In this work, we investigated a set of 17 hydrated divalent magnesium clusters by means of local vibrational mode force constants calculated at the omega B97X-D/6-311++G(d,p) level of theory, where the nature of the ion-solvent and solvent-solvent interactions were interpreted from topological electron density analysis and natural population analysis. We found the intrinsic strength of inner shell Mg-O interactions for [Mg(H2O)(n)](2+) (n = 1-6) clusters to relate to the electron density at the bond critical point in Mg-O bonds. From the application of a secondary hydration shell to [Mg(H2O)(n)](2+) (n = 5-6) clusters, stronger Mg-O interactions were observed to correspond to larger instances of charge transfer between the lp(O) orbitals of the inner hydration shell and the unfilled valence shell of Mg. As the charge transfer between water molecules of the first and second solvent shell increased, so did the strength of their intermolecular hydrogen bonds (HBs). Cumulative local vibrational mode force constants of explicitly solvated Mg2+, having an outer hydration shell, reveal a CN of 5, rather than a CN of 6, to yield slightly more stable configurations in some instances. However, the cumulative local mode stretching force constants of implicitly solvated Mg2+ show the six-coordinated cluster to be the most stable. These results show that such intrinsic bond strength measures for Mg-O and HBs offer an effective way for determining the coordination number of hydrated magnesium ion clusters
A theoretical study of the spectroscopic properties of B<sub>2</sub>H<sub>6</sub> and of a series of B<sub>x</sub>Hyz- species (x = 1-12, y = 3-14, z = 0-2): From BH<sub>3</sub> to B<sub>12</sub>H122-
The characterization of boron-hydrogen compounds is an active research area which encompasses subjects as diverse as the chemistry and structures of closoboranes or the thermal decomposition mechanism of the borohydrides. Due to their high gravimetric hydrogen content, borohydrides are considered as potential hydrogen storage materials. Their thermal decompositions are multistep processes, for which the intermediate products are not easily identified. To help address this issue, we have extensively investigated the vibrational and NMR properties of 21 relevant BmHnz− boron-hydrogen species (m = 1–12; n = 1–14; z = 0–2) within density functional theory. We could thus show that the B3LYP-D2 dispersion-corrected hybrid can be used in combination with the large cc-pVTZ basis set for the reliable prediction of the 11B and 1H NMR spectra of the boron-hydrogen species, and also for the reliable prediction of their IR and Raman spectra while taking into account the anharmonicity of their molecular vibrations
Halogen bond of halonium ions : Benchmarking DFT methods for the description of NMR chemical shifts
Because of their anisotropic electron distribution and electron deficiency, halonium ions are unusually strong halogen-bond donors that form strong and directional three-center, four-electron halogen bonds. These halogen bonds have received considerable attention owing to their applicability in supramolecular and synthetic chemistry and have been intensely studied using spectroscopic and crystallographic techniques over the past decade. Their computational treatment faces different challenges to those of conventional weak and neutral halogen bonds. Literature studies have used a variety of wave functions and DFT functionals for prediction of their geometries and NMR chemical shifts, however, without any systematic evaluation of the accuracy of these methods being available. In order to provide guidance for future studies, we present the assessment of the accuracy of 12 common DFT functionals along with the Hartree–Fock (HF) and the second-order Møller–Plesset perturbation theory (MP2) methods, selected from an initial set of 36 prescreened functionals, for the prediction of 1H, 13C, and 15N NMR chemical shifts of [N–X–N]+ halogen-bond complexes, where X = F, Cl, Br, and I. Using a benchmark set of 14 complexes, providing 170 high-quality experimental chemical shifts, we show that the choice of the DFT functional is more important than that of the basis set. The M06 functional in combination with the aug-cc-pVTZ basis set is demonstrated to provide the overall most accurate NMR chemical shifts, whereas LC-ωPBE, ωB97X-D, LC-TPSS, CAM-B3LYP, and B3LYP to show acceptable performance. Our results are expected to provide a guideline to facilitate future developments and applications of the [N–X–N]+ halogen bond
Theoretical study of B<sub>12</sub>H<sub>n</sub>F<sup>2-</sup><sub>(12-n)</sub> species
B12H122− can be formed during the thermal decomposition of metal borohydrides (M(BH4)x). Halogen ions such as fluoride or chloride can contribute to destabilize the BH4− ions. Hydride and fluoride mixed species like B12HnF(12−n)2− will be probable products after hydrogen release from mixed boro-hydride-fluoride (BHxF(4−x)−) or borohydride-borofluoride systems (BH4−, BF4−). Various number of isomers are possible for B12HnF(12−n)2− (n = 2–11). DFT calculations were performed on isolated ions of all the possible isomers for (n = 0–3, 9–12), using B3LYP functionals and 6-31G(d,p) basis set. Relative stability, vibrational and NMR spectroscopy of these isomers are discussed and compared with available experimental data
Computational study of the vibrational spectroscopy properties of boron-hydrogen compounds: Mg(B<sub>3</sub>H<sub>8</sub>)<sub>2</sub>, CB<sub>9</sub>H<sub>10</sub><sup>−</sup> and CB<sub>11</sub>H<sub>12</sub><sup>−</sup>
We report the DFT study of the vibrational spectroscopy properties of Mg(B3H8)2, a potential intermediate in the decomposition of Mg(BH4)2, as well as those of CB11H12− and CB9H10−, whose salts can exhibit high ionic conductivities. Because the inclusion of anharmonicity is key to the accurate description of the vibrational properties of BH species [D. Sethio, L. M. Lawson Daku, H. Hagemann. Int. J. Hydrogen Energy, 41 (2016) 6814], the calculations were performed both in the harmonic and in the anharmonic approximation. The IR and Raman spectra of Cs(CB11H12) and Na2(B10H10) have also been measured. The calculated and experimental spectra are in good agreement. A comparative analysis of the vibrational spectroscopy properties is made for B3H8− and Mg(B3H8)2, B12H122− and CB11H12−, and for B10H102− and CB9H10−