1,582 research outputs found

    Accumulation and distribution of zinc in the leaves and roots of the hyperaccumulator Noccaea caerulescens

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    Understanding the uptake mechanisms of heavy metals by hyperaccumulators is necessary for improving phytoextraction options to reduce metal toxicities in contaminated soils. In this study, the capacity of Zn uptake by the hyperaccumulator Noccaea caerulescens was investigated and compared to the non-hyperaccumulator Thlaspi arvense. The plants were grown under hydroponic conditions in a glasshouse. The distribution of Zn in the roots and leaves of these species was investigated by scanning electron microscopy with energy-dispersive X-ray analysis. Compared with the control with no Zn added, it was shown that prolonged Zn treatments decreased the biomass of both N. caerulescens and T. arvense. Since N. caerulescens requires Zn for growth, no Zn toxicity symptoms were observed, even when the Zn concentration in shoots reached 2.5% dry mass. T. arvense showed serious Zn toxicity only after two weeks of Zn treatment. Zn uptake by N. caerulescens was mainly translocated to the leaves while almost all of the Zn taken-up by T. arvense was retained in the roots. In N. caerulescens, increasing concentration of Zn in the supply decreased Ca and P concentrations in the shoots by up to 50 and 35%, respectively. Zn-containing crystals were abundant in both the upper and lower epidermal cells of the leaves and in the cortex of the roots during the later growth phase. Co-localization of Ca and Zn, P and S were found in leaf and root tissues. The results suggest that Zn-rich crystals with an abundance of the Zn ligand in the roots and shoots, and co-localization and interaction between Zn and other ions, may have functional significance with respect to conferring particular attributes to N. caerulescens that are not present in the non-hyperaccumulator counterpart. An understanding of these species-specific differences has relevance from the perspective of offering some insight into how particular species could contribute to a strategy for the detoxification of Zn-contaminated sites

    The effect of polymer stiffness on magnetization reversal of magnetorheological elastomers

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    Ultrasoft magnetorheological elastomers (MREs) offer convenient real-time magnetic field control of mechanical properties that provides a means to mimic mechanical cues and regulators of cells in vitro. Here, we systematically investigate the effect of polymer stiffness on magnetization reversal of MREs using a combination of magnetometry measurements and computational modeling. Poly-dimethylsiloxane- based MREs with Young’s moduli that range over two orders of magnitude were synthesized using commercial polymers SylgardTM 527, Sylgard 184, and carbonyl iron powder. The magnetic hysteresis loops of the softer MREs exhibit a characteristic pinched loop shape with almost zero remanence and loop widening at intermediate fields that monotonically decreases with increasing polymer stiffness. A simple two-dipole model that incorporates magneto-mechanical coupling not only confirms that micrometer-scale particle motion along the applied magnetic field direction plays a defining role in the magnetic hysteresis of ultrasoft MREs but also reproduces the observed loop shapes and widening trends for MREs with varying polymer stiffnesses

    Quality control in microarray assessment of gene expression in human airway epithelium

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    <p>Abstract</p> <p>Background</p> <p>Microarray technology provides a powerful tool for defining gene expression profiles of airway epithelium that lend insight into the pathogenesis of human airway disorders. The focus of this study was to establish rigorous quality control parameters to ensure that microarray assessment of the airway epithelium is not confounded by experimental artifact. Samples (total n = 223) of trachea, large and small airway epithelium were collected by fiberoptic bronchoscopy of 144 individuals and hybridized to Affymetrix microarrays. The pre- and post-chip quality control (QC) criteria established, included: (1) RNA quality, assessed by RNA Integrity Number (RIN) ≥ 7.0; (2) cRNA transcript integrity, assessed by signal intensity ratio of GAPDH 3' to 5' probe sets ≤ 3.0; and (3) the multi-chip normalization scaling factor ≤ 10.0.</p> <p>Results</p> <p>Of the 223 samples, all three criteria were assessed in 191; of these 184 (96.3%) passed all three criteria. For the remaining 32 samples, the RIN was not available, and only the other two criteria were used; of these 29 (90.6%) passed these two criteria. Correlation coefficients for pairwise comparisons of expression levels for 100 maintenance genes in which at least one array failed the QC criteria (average Pearson r = 0.90 ± 0.04) were significantly lower (p < 0.0001) than correlation coefficients for pairwise comparisons between arrays that passed the QC criteria (average Pearson r = 0.97 ± 0.01). Inter-array variability was significantly decreased (p < 0.0001) among samples passing the QC criteria compared with samples failing the QC criteria.</p> <p>Conclusion</p> <p>Based on the aberrant maintenance gene data generated from samples failing the established QC criteria, we propose that the QC criteria outlined in this study can accurately distinguish high quality from low quality data, and can be used to delete poor quality microarray samples before proceeding to higher-order biological analyses and interpretation.</p

    Prescription and Other Medication Use in Pregnancy

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    OBJECTIVE: To characterize prescription and other medication use in a geographically and ethnically diverse cohort of women in their first pregnancy. METHODS: In a prospective, longitudinal cohort study of nulliparous women followed through pregnancy from the first trimester, medication use was chronicled longitudinally throughout pregnancy. Structured questions and aids were used to capture all medications taken as well as reasons they were taken. Total counts of all medications taken including number in each category and class were captured. Additionally, reasons the medications were taken were recorded. Trends in medications taken across pregnancy and in the first trimester were determined. RESULTS: Of the 9,546 study participants, 9,272 (97.1%) women took at least one medication during pregnancy with 9,139 (95.7%) taking a medication in the first trimester. Polypharmacy, defined as taking at least five medications, occurred in 2,915 (30.5%) women. Excluding vitamins, supplements, and vaccines, 73.4% of women took a medication during pregnancy with 55.1% taking one in the first trimester. The categories of drugs taken in pregnancy and in the first trimester include the following: gastrointestinal or antiemetic agents (34.3%, 19.5%), antibiotics (25.5%, 12.6%), and analgesics (23.7%, 15.6%, which includes 3.6%; 1.4% taking an opioid pain medication). CONCLUSION: In this geographically and ethnically diverse cohort of nulliparous pregnant women, medication use was nearly universal and polypharmacy was common
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