14 research outputs found
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tranSMART: An Open Source Knowledge Management and High Content Data Analytics Platform
The tranSMART knowledge management and high-content analysis platform is a flexible software framework featuring novel research capabilities. It enables analysis of integrated data for the purposes of hypothesis generation, hypothesis validation, and cohort discovery in translational research. tranSMART bridges the prolific world of basic science and clinical practice data at the point of care by merging multiple types of data from disparate sources into a common environment. The application supports data harmonization and integration with analytical pipelines. The application code was released into the open source community in January 2012, with 32 instances in operation. tranSMART’s extensible data model and corresponding data integration processes, rapid data analysis features, and open source nature make it an indispensable tool in translational or clinical research
Fractionated Laser Resurfacing Corrects the Inappropriate UVB Response in Geriatric Skin
Disturbance is required for CO(2)-dependent promotion of woody plant growth in grasslands
The relative effects of disturbance (here defined as bare soil), competition for edaphic resources, thermal interference and elevated [CO2] on growth of tree seedlings in grasslands were studied under field conditions. Snow gum (Eucalyptus pauciflora Sieb. ex Spreng.) seedlings were grown in open-top chambers flushed with either ambient or elevated [CO2] from March 2004 to January 2005 (autumn to summer). These seedlings were planted into three treatments (i.e. bare soil, soil covered with straw or soil supporting a sward of live pasture grass) to separate effects of grass on seedling growth into those due to competition with grass for soil resources or to alteration of the thermal environment caused by a grassy surface (Ball et al. 2002). After the first major autumn frost, seedlings growing in competition with grass lost 59% of their canopy area, whereas those growing in bare soil or straw suffered negligible damage. These results reveal the complexity of competitive inhibition of plant growth in which ineffective competition for resources such as soil water enhances the vulnerability of the plant to abiotic stress, in this case frost. Tree seedlings growing in bare soil and straw commenced growth earlier in spring than those growing in competition with grass, where soil moisture was consistently lowest. Under ambient [CO2], growth was greater in bare soil than in straw, consistent with thermal interference, but these differences disappeared under elevated [CO2]. Elevated [CO2] significantly increased biomass accumulation for seedlings growing in bare soil and straw treatments, but not in grass. Thus, elevated [CO2] alleviated apparent thermal interference of seedling growth in spring but did not overcome adverse effects on seedling growth of either competitive reduction in soil resources or competitive enhancement of environmental stress. Nevertheless, elevated [CO2] could promote invasion of grasslands due to enhancement of woody plant growth in bare soil created by disturbances.Beth R. Loveys, John J. G. Egerton, Dan Bruhn and Marilyn C. Bal