The invariant uridine of stop codons contacts the conserved NIKSR loop of human eRF1 in the ribosome

To unravel the region of human eukaryotic release factor 1 (eRF1) that is close to stop codons within the ribosome, we used mRNAs containing a single photoactivatable 4-thiouridine (s(4)U) residue in the first position of stop or control sense codons. Accurate phasing of these mRNAs onto the ribosome was achieved by the addition of tRNA(Asp). Under these conditions, eRF1 was shown to crosslink exclusively to mRNAs containing a stop or s(4)UGG codon. A procedure that yielded (32)P-labeled eRF1 deprived of the mRNA chain was developed; analysis of the labeled peptides generated after specific cleavage of both wild-type and mutant eRF1s maps the crosslink in the tripeptide KSR (positions 63–65 of human eRF1) and points to K63 located in the conserved NIKS loop as the main crosslinking site. These data directly show the interaction of the N-terminal (N) domain of eRF1 with stop codons within the 40S ribosomal subunit and provide strong support for the positioning of the eRF1 middle (M) domain on the 60S subunit. Thus, the N and M domains mimic the tRNA anticodon and acceptor arms, respectively

Bridging different perspectives for biocultural conservation: art-based participatory research on native maize conservation in two indigenous farming communities in Oaxaca, Mexico

Native maize conservation rests on the custody of traditional and indigenous small-scale farmers, but their traditional practices and way of life are challenged by multiple forces associated with globalization, international trade and neoliberal agricultural policies. Through participatory art-based research with two indigenous communities in Oaxaca, Mexico, we identified the main challenges and strategies for native maize conservation, as perceived by these farming communities. We implemented a stepwise method to elicit local strategies for biocultural conservation pertinent across gender and generations. We conclude that understanding the heterogeneity of perspectives is important for identifying root causes of agrobiodiversity decline and strategies for biocultural native maize conservation