Effects of Degraded Optical Conditions on Behavioural Responses to Alarm Cues in a Freshwater Fish

Prey organisms often use multiple sensory cues to gain reliable information about imminent predation threat. In this study we test if a freshwater fish increases the reliance on supplementary cues when the reliability of the primary cue is reduced. Fish commonly use vision to evaluate predation threat, but may also use chemical cues from predators or injured conspecifics. Environmental changes, such as increasing turbidity or water colour, may compromise the use of vision through changes in the optical properties of water. In an experiment we tested if changes in optical conditions have any effects on how crucian carp respond to chemical predator cues. In turbidity treatments we added either clay or algae, and in a brown water colour treatment we added water with a high humic content. We found that carp reduced activity in response to predator cues, but only in the turbidity treatments (clay, algae), whereas the response in the brown water treatment was intermediate, and not significantly different from, clear and turbid water treatments. The increased reliance on chemical cues indicates that crucian carp can compensate for the reduced information content from vision in waters where optical conditions are degraded. The lower effect in brown water may be due to the reduction in light intensity, changes in the spectral composition (reduction of UV light) or to a change in chemical properties of the cue in humic waters

Carnivore Translocations and Conservation: Insights from Population Models and Field Data for Fishers (Martes pennanti)

Translocations are frequently used to restore extirpated carnivore populations. Understanding the factors that influence translocation success is important because carnivore translocations can be time consuming, expensive, and controversial. Using population viability software, we modeled reintroductions of the fisher, a candidate for endangered or threatened status in the Pacific states of the US. Our model predicts that the most important factor influencing successful re-establishment of a fisher population is the number of adult females reintroduced (provided some males are also released). Data from 38 translocations of fishers in North America, including 30 reintroductions, 5 augmentations and 3 introductions, show that the number of females released was, indeed, a good predictor of success but that the number of males released, geographic region and proximity of the source population to the release site were also important predictors. The contradiction between model and data regarding males may relate to the assumption in the model that all males are equally good breeders. We hypothesize that many males may need to be released to insure a sufficient number of good breeders are included, probably large males. Seventy-seven percent of reintroductions with known outcomes (success or failure) succeeded; all 5 augmentations succeeded; but none of the 3 introductions succeeded. Reintroductions were instrumental in reestablishing fisher populations within their historical range and expanding the range from its most-contracted state (43% of the historical range) to its current state (68% of the historical range). To increase the likelihood of translocation success, we recommend that managers: 1) release as many fishers as possible, 2) release more females than males (55–60% females) when possible, 3) release as many adults as possible, especially large males, 4) release fishers from a nearby source population, 5) conduct a formal feasibility assessment, and 6) develop a comprehensive implementation plan that includes an active monitoring program

Both Positive and Negative Selection Pressures Contribute to the Polymorphism Pattern of the Duplicated Human CYP21A2 Gene.

The human steroid 21-hydroxylase gene (CYP21A2) participates in cortisol and aldosterone biosynthesis, and resides together with its paralogous (duplicated) pseudogene in a multiallelic copy number variation (CNV), called RCCX CNV. Concerted evolution caused by non-allelic gene conversion has been described in great ape CYP21 genes, and the same conversion activity is responsible for a serious genetic disorder of CYP21A2, congenital adrenal hyperplasia (CAH). In the current study, 33 CYP21A2 haplotype variants encoding 6 protein variants were determined from a European population. CYP21A2 was shown to be one of the most diverse human genes (HHe=0.949), but the diversity of intron 2 was greater still. Contrary to previous findings, the evolution of intron 2 did not follow concerted evolution, although the remaining part of the gene did. Fixed sites (different fixed alleles of sites in human CYP21 paralogues) significantly accumulated in intron 2, indicating that the excess of fixed sites was connected to the lack of effective non-allelic conversion and concerted evolution. Furthermore, positive selection was presumably focused on intron 2, and possibly associated with the previous genetic features. However, the positive selection detected by several neutrality tests was discerned along the whole gene. In addition, the clear signature of negative selection was observed in the coding sequence. The maintenance of the CYP21 enzyme function is critical, and could lead to negative selection, whereas the presumed gene regulation altering steroid hormone levels via intron 2 might help fast adaptation, which broadly characterizes the genes of human CNVs responding to the environment

X-ray-based morphometrics : an approach to diagnose vertebral abnormalities in undermineralized vertebrae of juvenile triploid all-female rainbow trout (Oncorhynchus mykiss) fed with a phosphorus deficient diet

Extended phosphorus (P) deficiency has been linked to an increase of skeletal deformities in farmed salmonids. To date, X-ray examination still is the most practical way to detect abnormalities that are not externally visible. The aim of this study was to develop a standardized method based on empirical measurements that provides an early radiograph-based detection of deformities. Triploid all-female rainbow trout (60.8 +/- 1.6 g) were fed with phosphorus (P)-deficient and P-sufficient diets (total P = 0.5% and 0.92%, respectively). Experiments were carried out in 12 circular re-circulating tanks (n = 140/tank; 8.5-52.7 kg m(-3); 12 +/- 0.3 degrees C; 18L: 6D). All fish were x-rayed at week 5, 15 and 24 to monitor vertebral abnormalities. Fish were assigned to a vertebral phenotype (normal, biconcave or compressed) when all vertebrae of the caudal region (V31-44) showed the same type of abnormalities. At week 9, 18 and 27, ten fish per tank were randomly sampled according to their vertebral phenotype. Vertebrae V38-V39 were collected and a second X-ray was performed to confirm the above-mentioned phenotypes. Morphometrics (vertebral length and height; intervertebral distances and vertebral body angles) were measured directly on radiographs. For all parameters measured, comparisons were made between normal P-sufficient fish and different scenarios of vertebral development (normal, restored, stable and aggravated) in P-deficient fish. The two parameters showing the most sensitivity were the median intervertebral distance and dorsal/ventral vertebral endplate angles. When analysed together, these two parameters allow a quantitative distinction of the different vertebral phenotypes. Measuring dorsal/ventral vertebral endplate angles seems a promising approach to detect aberrant vertebral development at early stages as slight changes were observed in P-deficient vertebrae that were assessed as normal by visual examination. Further studies including histological examinations and comparison with other radiological imaging techniques are required to confirm these results