Mesh simplification with hierarchical shape analysis and iterative edge contraction

2003-2004 > Academic research: refereed > Publication in refereed journalVersion of RecordPublishe

Rapid changes of precipitation pH in Qinghai Province, the northeastern Tibetan Plateau

Rainfall monitoring programs were conducted in two industrial cities of China's Qinghai Province, Xining and Germu, in some periods of the 1980s and 1990s. The results show that the natural precipitation in this area is originally alkaline. Compared with the late 1980s records, pH values declined significantly from approximately 8 in the 1980s to below 7 in mid-1990s. Such rapid and drastic changes were attributed to fast industrial development that released a large amount of pollutants. Subsequent tough control on pollutant emission partly restored pH values back to above 7 in the late 1990s. The pH and rainfall chemical analyses indicate that alkaline rain in this continental arid region is caused by airborne dusts which originate from local alkaline soils. With decrease of pH value, the total ionic concentration of rainwater is increased because acids were added to the rainwater. © 2002 Elsevier Science B.V. All rights reserved.postprin

Mesh parameterization by minimizing the synthesized distortion metric with the coefficient-optimizing algorithm

2005-2006 > Academic research: refereed > Publication in refereed journalVersion of RecordPublishe

Geometric analysis of noisy perturbations to nonholonomic constraints

We propose two types of stochastic extensions of nonholonomic constraints for mechanical systems. Our approach relies on a stochastic extension of the Lagrange-d'Alembert framework. We consider in details the case of invariant nonholonomic systems on the group of rotations and on the special Euclidean group. Based on this, we then develop two types of stochastic deformations of the Suslov problem and study the possibility of extending to the stochastic case the preservation of some of its integrals of motion such as the Kharlamova or Clebsch-Tisserand integrals

Moisture increase in response to high-altitude warming evidenced by tree-rings on the southeastern Tibetan Plateau

Rapid warming has been observed in the high-altitude areas around the globe, but the implications on moisture change are not fully understood. Here we use tree-rings to reveal common moisture change on the southeastern Tibetan Plateau (TP) during the past five centuries, and show that regional moisture change in late spring to early summer (April–June) is closely related to large-scale temperature anomaly over the TP, with increased moisture coincident with periods of high temperature. The most recent pluvial during the 1990s–2000s is likely the wettest for the past five centuries, which coincides with the warmest period on the TP during the past millennium. Dynamic analysis reveals that vertical air convection is enhanced in response to anomalous TP surface warming, leading to an increase in lower-tropospheric humidity and effective precipitation over the southeastern TP. The coherent warm-wet relationship identified in both tree-rings and dynamic analysis implies a generally wetter condition on the southeastern TP under future warming.postprin

Seasonal and spatial variations of heavy metalsin surface sediments collected from the BaoxiangRiver in the Dianchi Watershed, China

To explore potential ecological hazards due to heavy metals in the Dianchi Lake Watershed, a three-stage European Community Bureau of Reference (BCR) sequential extraction procedure was applied to examine the spatial distributions and relative speciation ratios of Zn, Cu, Ni, Pb, and Cr in Baoxiang River sediments during wet and dry seasons. The metal species have similar spatial variations during different seasons. In the upstream reaches of the Baoxiang River, heavy metals reside primarily in the non-extractable residual fraction (72&ndash;90%). In the midstream, the residual fraction (35&ndash;89%) remains dominant, but the extractable fraction increases, featuring especially notable increases in the reducible fraction (5&ndash;40%). Downstream, the Cu, Ni, Pb, and Cr residual fractions remain high (46&ndash;80%) and the extractable fractions increase rapidly; the Zn extractable fraction is quite high (65.5%). Anthropogenic sources drive changes in heavy metal speciation. Changes in the river environment, such as pH and oxidation-reduction potential, also affect speciation. The reducible fraction of heavy metals in Baoxiang River sediments is most sensitive to pH. Potential ecological risk assessments for these five elements indicate that risks from Zn and Pb are mild to moderate in the middle and lower reaches of the river.<br style="line-height: normal; text-align: -webkit-auto; text-size-adjust: auto;" /

Optimal wavelength band clustering for multispectral iris recognition

Author name used in this publication: David Zhang2012-2013 > Academic research: refereed > Publication in refereed journalVersion of RecordPublishe

A Probabilistic Code Balance Constraint with Compactness and Informativeness Enhancement for Deep Supervised Hashing

Building on deep representation learning, deep supervised hashing has achieved promising performance in tasks like similarity retrieval. However, conventional code balance constraints (i.e., bit balance and bit uncorrelation) imposed on avoiding overfitting and improving hash code quality are unsuitable for deep supervised hashing owing to their inefficiency and impracticality of simultaneously learning deep data representations and hash functions. To address this issue, we propose probabilistic code balance constraints on deep supervised hashing to force each hash code to conform to a discrete uniform distribution. Accordingly, a Wasserstein regularizer aligns the distribution of generated hash codes to a uniform distribution. Theoretical analyses reveal that the proposed constraints form a general deep hashing framework for both bit balance and bit uncorrelation and maximizing the mutual information between data input and their corresponding hash codes. Extensive empirical analyses on two benchmark datasets further demonstrate the enhancement of compactness and informativeness of hash codes for deep supervised hash to improve retrieval performance (code available at: https://github.com/mumuxi/dshwr).</jats:p

CrossHybDetector: detection of cross-hybridization events in DNA microarray experiments

Background\ud DNA microarrays contain thousands of different probe sequences represented on their surface. These are designed in such a way that potential cross-hybridization reactions with non-target sequences are minimized. However, given the large number of probes, the occurrence of cross hybridization events cannot be excluded. This problem can dramatically affect the data quality and cause false positive/false negative results.\ud \ud Results\ud CrossHybDetector is a software package aimed at the identification of cross-hybridization events occurred during individual array hybridization, by using the probe sequences and the array intensity values. As output, the software provides the user with a list of array spots potentially &apos;corrupted&apos; and their associated p-values calculated by Monte Carlo simulations. Graphical plots are also generated, which provide a visual and global overview of the quality of the microarray experiment with respect to cross-hybridization issues.\ud \ud Conclusion\ud CrossHybDetector is implemented as a package for the statistical computing environment R and is freely available under the LGPL license within the CRAN project

HCV IRES manipulates the ribosome to promote the switch from translation initiation to elongation.

The internal ribosome entry site (IRES) of the hepatitis C virus (HCV) drives noncanonical initiation of protein synthesis necessary for viral replication. Functional studies of the HCV IRES have focused on 80S ribosome formation but have not explored its role after the 80S ribosome is poised at the start codon. Here, we report that mutations of an IRES domain that docks in the 40S subunit's decoding groove cause only a local perturbation in IRES structure and result in conformational changes in the IRES-rabbit 40S subunit complex. Functionally, the mutations decrease IRES activity by inhibiting the first ribosomal translocation event, and modeling results suggest that this effect occurs through an interaction with a single ribosomal protein. The ability of the HCV IRES to manipulate the ribosome provides insight into how the ribosome's structure and function can be altered by bound RNAs, including those derived from cellular invaders