23 research outputs found
Kondo effect of non-magnetic impurities and the co-existing charge order in the cuprate superconductors
We present a theory of Kondo effect caused by an induced magnetic moment near
non-magnetic impurities such as Zn and Li in the cuprate superconductors. Based
on the co-existence of charge order and superconductivity, a natural
description of the induced moment and the resulting Kondo effect is obtained in
the framework of bond-operator theory of microscopic t-J-V Hamiltonian. The
local density of state near impurities is computed in a self-consistent
Bogoliubov-de Gennes theory which shows a low-energy peak in the middle of
superconducting gap. Our theory also suggests that the charge order can be
enhanced near impuries.Comment: 5 pages, 4 figure
Quantifying the effect of experimental design choices for in vitro scratch assays
Scratch assays are often used to investigate potential drug treatments for chronic wounds and cancer. Interpreting these experiments with a mathematical model allows us to estimate the cell diffusivity, D, and the cell proliferation rate, 位. However, the influence of the experimental design on the estimates of D and 位 is unclear. Here we apply an approximate Bayesian computation (ABC) parameter inference method, which produces a posterior distribution of D and 位, to new sets of synthetic data, generated from an idealised mathematical model, and experimental data for a non-adhesive mesenchymal population of fibroblast cells. The posterior distribution allows us to quantify the amount of information obtained about D and 位. We investigate two types of scratch assay, as well as varying the number and timing of the experimental observations captured. Our results show that a scrape assay, involving one cell front, provides more precise estimates of D and 位, and is more computationally efficient to interpret than a wound assay, with two opposingly directed cell fronts. We find that recording two observations, after making the initial observation, is sufficient to estimate D and 位, and that the final observation time should correspond to the time taken for the cell front to move across the field of view. These results provide guidance for estimating D and 位, while simultaneously minimising the time and cost associated with performing and interpreting the experiment.Stuart T. Johnston, Joshua V. Ross, Benjamin J. Binder, D.L. Sean McElwain, Parvathi Haridas, Matthew J. Simpso