Fine root and soil nitrogen dynamics during stand development following shifting agriculture in Northeast India

Nitrogen (N) dynamics during changes in land use patterns in tropical forests may profoundly affect fine root dynamics and nutrient cycling processes. Variations in fine root biomass and soil N dynamics were assessed in developing stands of increasing ages following shifting agriculture in Mizoram, Northeast India, and comparisons were made with a natural forest stand. Concentrations of soil available N (NH4-N and NO3-N) and the proportion of NH4-N in total available N increased with stand age. The N-mineralization rate also increased with stand age whilst the proportion of nitrification relative to ammonification declined during succession. Fine root biomass and N-mineralization increased, and available N decreased during the monsoon season while this pattern was reversed during the winter season. A greater proportion of fine roots were <0.5 mm diameter in the younger sites, and turnover of fine roots was more rapid in the developing stands compared to the natural forest. Fine root biomass was correlated positively with N-mineralization rate and soil water content. Thus, it can be concluded that the fine root growth was aided by rapid N-mineralization, and both fine root growth and N-mineralization increase as stands redevelop following shifting cultivation disturbance

Control of blood glucose in type 2 diabetes without weight loss by modification of diet composition

BACKGROUND: Over the past several years our research group has taken a systematic, comprehensive approach to determining the effects on body function (hormonal and non-hormonal) of varying the amounts and types of proteins, carbohydrates and fats in the diet. We have been particularly interested in the dietary management of type 2 diabetes. Our objective has been to develop a diet for people with type 2 diabetes that does not require weight loss, oral agents, or insulin, but that still controls the blood glucose concentration. Our overall goal is to enable the person with type 2 diabetes to control their blood glucose by adjustment in the composition rather than the amount of food in their diet. METHODS: This paper is a brief summary and review of our recent diet-related research, and the rationale used in the development of diets that potentially are useful in the treatment of diabetes. RESULTS: We determined that, of the carbohydrates present in the diet, absorbed glucose is largely responsible for the food-induced increase in blood glucose concentration. We also determined that dietary protein increases insulin secretion and lowers blood glucose. Fat does not significantly affect blood glucose, but can affect insulin secretion and modify the absorption of carbohydrates. Based on these data, we tested the efficacy of diets with various protein:carbohydrate:fat ratios for 5 weeks on blood glucose control in people with untreated type 2 diabetes. The results were compared to those obtained in the same subjects after 5 weeks on a control diet with a protein:carbohydrate:fat ratio of 15:55:30. A 30:40:30 ratio diet resulted in a moderate but significant decrease in 24-hour integrated glucose area and % total glycohemoglobin (%tGHb). A 30:20:50 ratio diet resulted in a 38% decrease in 24-hour glucose area, a reduction in fasting glucose to near normal and a decrease in %tGHb from 9.8% to 7.6%. The response to a 30:30:40 ratio diet was similar. CONCLUSION: Altering the diet composition could be a patient-empowering method of improving the hyperglycemia of type 2 diabetes without weight loss or pharmacologic intervention

Microwave assisted heterogeneous catalysis: effects of varying oxygen concentrations on the oxidative coupling of methane

The oxidative coupling of methane was investigated over alumina supported La2O3/CeO2 catalysts under microwave dielectric heating conditions at different oxygen concentrations. It was observed that, at a given temperature using microwave heating, selectivities for both ethane and ethylene were notably higher when oxygen was absent than that in oxygen/methane mixtures. The differences were attributed to the localised heating of microwave radiation resulting in temperature inhomogeneity in the catalyst bed. A simplified model was used to estimate the temperature inhomogeneity; the temperature at the centre of the catalyst bed was 85 °C greater than that at the periphery when the catalyst was heated by microwaves in a gas mixture with an oxygen concentration of 12.5% (v/v), and the temperature difference was estimated to be 168 °C in the absence of oxygen

Metal‐rich soils increase tropical tree stoichiometric distinctiveness

Background and aims: Ultramafic soils have high metal concentrations, offering a key opportunity to understand if such metals are strong predictors of leaf stoichiometry. This is particularly relevant for tropical forests where large knowledge gaps exist. Methods: On the tropical island of Sulawesi, Indonesia, we sampled forests on sand, limestone, mafic and ultramafic soils that present a range of soil metal concentrations. We asked how variation in 12 soil elements (metals and macronutrients) influenced leaf stoichiometry and whether stoichiometric distinctiveness (the average difference between a species and all others in a multivariate space, the axes of which are the concentrations of each leaf element) is influenced by increasing soil metal concentrations. Results: Positive correlations between corresponding elements in soils and leaves were only found for Ca and P. Noticeably, soil Cr had a negative effect upon leaf P. Whilst most species had low stoichiometric distinctiveness, some species had greater distinctiveness on stressful metal-rich ultramafic soils, generally caused by the accumulation of Al, Co, Cr or Ni. Conclusions: Our observation of increased stoichiometric distinctiveness in tropical forests on ultramafic soils indicates greater niche differentiation, and contrasts with the assumption that stressful environments remove species with extreme phenotypes

Floristics of forests across low nutrient soils in Sulawesi, Indonesia

The island of Sulawesi formed from the joining of proto-islands roughly three million years ago. Regions of zoological endemism, corresponding to the proto-islands, have been reported. Sulawesi's tree communities, however, remain poorly documented. In better-studied tropical regions, soil types similar to those found in Sulawesi often have distinctive tree communities. To gather data on Sulawesi's tree communities, we established ten (0.25 ha) plots on four soil types across three regions. We documented diversity, endemism, dominance, and species composition. Linear models of species composition showed greater influence of geographic distance rather than soil, and no relationship with climate. This suggests that the legacy of Sulawesi's formation may have influenced tree communities more so than the soil types we sampled. Most of our plots were on stressful soil types making it difficult to conclude on the importance of edaphic specialization in the Sulawesi tree flora. The lack of climatic effects reflects Sulawesi's position within the wet tropics where the small climatic differences are unlikely to have large influence on tree communities. Abstract in Indonesian is available with online material

Structural and biophysical insights into the mode of covalent binding of rationally designed potent BMX inhibitors.

The bone marrow tyrosine kinase in chromosome X (BMX) is pursued as a drug target because of its role in various pathophysiological processes. We designed BMX covalent inhibitors with single-digit nanomolar potency with unexploited topological pharmacophore patterns. Importantly, we reveal the first X-ray crystal structure of covalently inhibited BMX at Cys496, which displays key interactions with Lys445, responsible for hampering ATP catalysis and the DFG-out-like motif, typical of an inactive conformation. Molecular dynamic simulations also showed this interaction for two ligand/BMX complexes. Kinome selectivity profiling showed that the most potent compound is the strongest binder, displays intracellular target engagement in BMX-transfected cells with two-digit nanomolar inhibitory potency, and leads to BMX degradation PC3 in cells. The new inhibitors displayed anti-proliferative effects in androgen-receptor positive prostate cancer cells that where further increased when combined with known inhibitors of related signaling pathways, such as PI3K, AKT and Androgen Receptor. We expect these findings to guide development of new selective BMX therapeutic approaches

NOA1 Functions in a Temperature-Dependent Manner to Regulate Chlorophyll Biosynthesis and Rubisco Formation in Rice

NITRIC OXIDE-ASSOCIATED1 (NOA1) encodes a circularly permuted GTPase (cGTPase) known to be essential for ribosome assembly in plants. While the reduced chlorophyll and Rubisco phenotypes were formerly noticed in both NOA1-supressed rice and Arabidopsis, a detailed insight is still necessary. In this study, by using RNAi transgenic rice, we further demonstrate that NOA1 functions in a temperature-dependent manner to regulate chlorophyll and Rubisco levels. When plants were grown at 30°C, the chlorophyll and Rubisco levels in OsNOA1-silenced plants were only slightly lower than those in WT. However, at 22°C, the silenced plants accumulated far less chlorophyll and Rubisco than WT. It was further revealed that the regulation of chlorophyll and Rubisco occurs at the anabolic level. Etiolated WT seedlings restored chlorophyll and Rubisco accumulations readily once returned to light, at either 30°C or 15°C. Etiolated OsNOA1-silenced plants accumulated chlorophyll and Rubisco to normal levels only at 30°C, and lost this ability at low temperature. On the other hand, de-etiolated OsNOA1-silenced seedlings maintained similar levels of chlorophyll and Rubisco as WT, even after being shifted to 15°C for various times. Further expression analyses identified several candidate genes, including OsPorA (NADPH: protochlorophyllide oxidoreductase A), OsrbcL (Rubisco large subunit), OsRALyase (Ribosomal RNA apurinic site specific lyase) and OsPuf4 (RNA-binding protein of the Puf family), which may be involved in OsNOA1-regulated chlorophyll biosynthesis and Rubisco formation. Overall, our results suggest OsNOA1 functions in a temperature-dependent manner to regulate chlorophyll biosynthesis, Rubisco formation and plastid development in rice

Responses of Soil Fungi to Logging and Oil Palm Agriculture in Southeast Asian Tropical Forests

© 2014, Springer Science+Business Media New York. Human land use alters soil microbial composition and function in a variety of systems, although few comparable studies have been done in tropical forests and tropical agricultural production areas. Logging and the expansion of oil palm agriculture are two of the most significant drivers of tropical deforestation, and the latter is most prevalent in Southeast Asia. The aim of this study was to compare soil fungal communities from three sites in Malaysia that represent three of the most dominant land-use types in the Southeast Asia tropics: a primary forest, a regenerating forest that had been selectively logged 50 years previously, and a 25-year-old oil palm plantation. Soil cores were collected from three replicate plots at each site, and fungal communities were sequenced using the Illumina platform. Extracellular enzyme assays were assessed as a proxy for soil microbial function. We found that fungal communities were distinct across all sites, although fungal composition in the regenerating forest was more similar to the primary forest than either forest community was to the oil palm site. Ectomycorrhizal fungi, which are important associates of the dominant Dipterocarpaceae tree family in this region, were compositionally distinct across forests, but were nearly absent from oil palm soils. Extracellular enzyme assays indicated that the soil ecosystem in oil palm plantations experienced altered nutrient cycling dynamics, but there were few differences between regenerating and primary forest soils. Together, these results show that logging and the replacement of primary forest with oil palm plantations alter fungal community and function, although forests regenerating from logging had more similarities with primary forests in terms of fungal composition and nutrient cycling potential. Since oil palm agriculture is currently the mostly rapidly expanding equatorial crop and logging is pervasive across tropical ecosystems, these findings may have broad applicability