Colorings of simplicial complexes and vector bundles over Davis-Januszkiewicz spaces

We show that coloring properties of a simplicial complex K are reflected by splitting properties of a bundle over the associated Davis-Januszkiewicz space whose Chern classes are given by the elementary symmetric polynomials in the generators of the Stanley-Reisner algebra of K.Comment: 8 page

Loop space homology associated with the mod 2 Dickson invariants

Peer reviewedPublisher PD

On the integral cohomology of smooth toric varieties

Let $X_\Sigma$ be a smooth, not necessarily compact toric variety. We show that a certain complex, defined in terms of the fan $\Sigma$, computes the integral cohomology of $X_\Sigma$, including the module structure over the homology of the torus. In some cases we can also give the product. As a corollary we obtain that the cycle map from Chow groups to integral Borel-Moore homology is split injective for smooth toric varieties. Another result is that the differential algebra of singular cochains on the Borel construction of $X_\Sigma$ is formal.Comment: 10 page

Graph products of spheres, associative graded algebras and Hilbert series

Given a finite, simple, vertex-weighted graph, we construct a graded associative (non-commutative) algebra, whose generators correspond to vertices and whose ideal of relations has generators that are graded commutators corresponding to edges. We show that the Hilbert series of this algebra is the inverse of the clique polynomial of the graph. Using this result it easy to recognize if the ideal is inert, from which strong results on the algebra follow. Non-commutative Grobner bases play an important role in our proof. There is an interesting application to toric topology. This algebra arises naturally from a partial product of spheres, which is a special case of a generalized moment-angle complex. We apply our result to the loop-space homology of this space.Comment: 19 pages, v3: elaborated on connections to related work, added more citations, to appear in Mathematische Zeitschrif

Dense active matter model of motion patterns in confluent cell monolayers

Epithelial cell monolayers show remarkable displacement and velocity correlations over distances of ten or more cell sizes that are reminiscent of supercooled liquids and active nematics. We show that many observed features can be described within the framework of dense active matter, and argue that persistent uncoordinated cell motility coupled to the collective elastic modes of the cell sheet is sufficient to produce swirl-like correlations. We obtain this result using both continuum active linear elasticity and a normal modes formalism, and validate analytical predictions with numerical simulations of two agent-based cell models, soft elastic particles and the self-propelled Voronoi model together with in-vitro experiments of confluent corneal epithelial cell sheets. Simulations and normal mode analysis perfectly match when tissue-level reorganisation occurs on times longer than the persistence time of cell motility. Our analytical model quantitatively matches measured velocity correlation functions over more than a decade with a single fitting parameter.Comment: updated version accepted for publication in Nat. Com

Active wetting of epithelial tissues

Development, regeneration and cancer involve drastic transitions in tissue morphology. In analogy with the behavior of inert fluids, some of these transitions have been interpreted as wetting transitions. The validity and scope of this analogy are unclear, however, because the active cellular forces that drive tissue wetting have been neither measured nor theoretically accounted for. Here we show that the transition between 2D epithelial monolayers and 3D spheroidal aggregates can be understood as an active wetting transition whose physics differs fundamentally from that of passive wetting phenomena. By combining an active polar fluid model with measurements of physical forces as a function of tissue size, contractility, cell-cell and cell-substrate adhesion, and substrate stiffness, we show that the wetting transition results from the competition between traction forces and contractile intercellular stresses. This competition defines a new intrinsic lengthscale that gives rise to a critical size for the wetting transition in tissues, a striking feature that has no counterpart in classical wetting. Finally, we show that active shape fluctuations are dynamically amplified during tissue dewetting. Overall, we conclude that tissue spreading constitutes a prominent example of active wetting --- a novel physical scenario that may explain morphological transitions during tissue morphogenesis and tumor progression

Dinosaur peptides suggest mechanisms of protein survival

Eleven collagen peptide sequences recovered from chemical extracts of dinosaur bones were mapped onto molecular models of the vertebrate collagen fibril derived from extant taxa. The dinosaur peptides localized to fibril regions protected by the close packing of collagen molecules, and contained few acidic amino acids. Four peptides mapped to collagen regions crucial for cell-collagen interactions and tissue development. Dinosaur peptides were not represented in more exposed parts of the collagen fibril or regions mediating intermolecular cross-linking. Thus functionally significant regions of collagen fibrils that are physically shielded within the fibril may be preferentially preserved in fossils. These results show empirically that structure-function relationships at the molecular level could contribute to selective preservation in fossilized vertebrate remains across geological time, suggest a ‘preservation motif’, and bolster current concepts linking collagen structure to biological function. This non-random distribution supports the hypothesis that the peptides are produced by the extinct organisms and suggests a chemical mechanism for survival