Can we trust elemental abundances derived in late-type giants with the classical 1D stellar atmosphere models?

We compare the abundances of various chemical species as derived with 3D hydrodynamical and classical 1D stellar atmosphere codes in a late-type giant characterized by T_eff=3640K, log g = 1.0, [M/H] = 0.0. For this particular set of atmospheric parameters the 3D-1D abundance differences are generally small for neutral atoms and molecules but they may reach up to 0.3-0.4 dex in case of ions. The 3D-1D differences generally become increasingly more negative at higher excitation potentials and are typically largest in the optical wavelength range. Their sign can be both positive and negative, and depends on the excitation potential and wavelength of a given spectral line. While our results obtained with this particular late-type giant model suggest that 1D stellar atmosphere models may be safe to use with neutral atoms and molecules, care should be taken if they are exploited with ions.Comment: Poster presented at the IAU Symposium 265 "Chemical Abundances in the Universe: Connecting First Stars to Planets", Rio de Janeiro, 10-14 August 2009; 2 pages, 1 figur

Correspondence between geometrical and differential definitions of the sine and cosine functions and connection with kinematics

In classical physics, the familiar sine and cosine functions appear in two forms: (1) geometrical, in the treatment of vectors such as forces and velocities, and (2) differential, as solutions of oscillation and wave equations. These two forms correspond to two different definitions of trigonometric functions, one geometrical using right triangles and unit circles, and the other employing differential equations. Although the two definitions must be equivalent, this equivalence is not demonstrated in textbooks. In this manuscript, the equivalence between the geometrical and the differential definition is presented assuming no a priori knowledge of the properties of sine and cosine functions. We start with the usual length projections on the unit circle and use elementary geometry and elementary calculus to arrive to harmonic differential equations. This more general and abstract treatment not only reveals the equivalence of the two definitions but also provides an instructive perspective on circular and harmonic motion as studied in kinematics. This exercise can help develop an appreciation of abstract thinking in physics.Comment: 6 pages including 1 figur

Fiberoptic microtransducer pressure technology: Uurodynamic implications

The FST 200 is a novel commercially available pressure measurement system that combines microtechnology and fiberoptics and is particularly well suited for invasive urodynamic studies. Pressure recording with this system is highly accurate and reproducible. The pressure curves obtained parallel those from standard water cystometry. Being small and portable, the system lends itself to invasive transurethral monitoring in the privacy of an examination room. Additionally, the 5F catheter size allows the performance of leak point pressures and pressure/flow voiding studies with minimal urethral stenting artifact often seen with larger catheters. The technical aspects of this system are presented.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/38473/1/1930120211_ftp.pd

Interferon Impedes an Early Step of Hepatitis Delta Virus Infection

Hepatitis delta virus (HDV) infects hepatocytes, the major cell type of the liver. Infection of the liver may be either transient or chronic. The prognosis for patients with chronic HDV infection is poor, with a high risk of cirrhosis and hepatocellular carcinoma. The best antiviral therapy is weekly administration for at least one year of high doses of interferon alpha. This efficacy of interferon therapy has been puzzling in that HDV replication in transfected cell lines is reported as insensitive to administration of interferon alpha or gamma. Similarly, this study shows that even when an interferon response was induced by transfection of poly(IC) into a cell line, HDV RNA accumulation was only modestly inhibited. However, when the HDV replication was initiated by infection of primary human hepatocytes, simultaneous addition of interferons alpha or gamma at 600 units/ml, a concentration comparable to that achieved in treated patients, the subsequent HDV RNA accumulation was inhibited by at least 80%. These interferon treatments were shown to produce significant time-dependent increases of host response proteins such as for Stat-1, phosphoStat-1, Mx1/2/3 and PKR, and yet interferon pretreatment of hepatocytes did not confer an increased inhibition of HDV replication over interferon treatment at the time of (or after) infection. These and other data support the interpretation that interferon action against HDV replication can occur and is largely mediated at the level of entry into primary human hepatocytes. Thus in vivo, the success of long-term interferon therapy for chronic HDV, may likewise involve blocking HDV spread by interfering with the initiation of productive infection of naïve hepatocytes

Projections of the current and future disease burden of hepatitis C virus infection in Malaysia

The prevalence of hepatitis C virus (HCV) infection in Malaysia has been estimated at 2.5% of the adult population. Our objective, satisfying one of the directives of the WHO Framework for Global Action on Viral Hepatitis, was to forecast the HCV disease burden in Malaysia using modelling methods.An age-structured multi-state Markov model was developed to simulate the natural history of HCV infection. We tested three historical incidence scenarios that would give rise to the estimated prevalence in 2009, and calculated the incidence of cirrhosis, end-stage liver disease, and death, and disability-adjusted life-years (DALYs) under each scenario, to the year 2039. In the baseline scenario, current antiviral treatment levels were extended from 2014 to the end of the simulation period. To estimate the disease burden averted under current sustained virological response rates and treatment levels, the baseline scenario was compared to a counterfactual scenario in which no past or future treatment is assumed.In the baseline scenario, the projected disease burden for the year 2039 is 94,900 DALYs/year (95% credible interval (CrI): 77,100 to 124,500), with 2,002 (95% CrI: 1340 to 3040) and 540 (95% CrI: 251 to 1,030) individuals predicted to develop decompensated cirrhosis and hepatocellular carcinoma, respectively, in that year. Although current treatment practice is estimated to avert a cumulative total of 2,200 deaths from DC or HCC, a cumulative total of 63,900 HCV-related deaths is projected by 2039.The HCV-related disease burden is already high and is forecast to rise steeply over the coming decades under current levels of antiviral treatment. Increased governmental resources to improve HCV screening and treatment rates and to reduce transmission are essential to address the high projected HCV disease burden in Malaysia

Final analysis of the international observational S-Collate study of peginterferon alfa-2a in patients with chronic hepatitis B

Background and aims Sustained off-treatment immune control is achievable in a proportion of patients with chronic hepatitis B treated with peginterferon alfa-2a. We evaluated on-treatment predictors of hepatitis B surface antigen (HBsAg) clearance 3 years after peginterferon alfa-2a treatment and determined the incidence of hepatocellular carcinoma. Methods A prospective, international, multicenter, observational study in patients with chronic hepatitis B who have been prescribed peginterferon alfa-2a (40KD) in a real-world setting. The primary endpoint was HBsAg clearance after 3 years' follow-up. Results The modified intention-to-treat population comprised 844 hepatitis B e antigen (HBeAg)positive patients (540 [64%] completed 3 years' follow-up), and 872 HBeAg-negative patients (614 [70%] completed 3 years' follow-up). At 3 years' follow-up, HBsAg clearance rates in HBeAg-positive and HBeAg-negative populations, respectively, were 2% (16/844) and 5% (41/872) in the modified intention-to-treat population and 5% [16/328] and 10% [41/ 394] in those with available data. In HBeAg-positive patients with data, Week 12 HBsAg levels <1500, 1500-20,000, and >20,000 IU/mL were associated with HBsAg clearance rates at 3 years' follow-up of 11%, 1%, and 5%, respectively (Week 24 predictability was similar). In HBeAg-negative patients with available data, a 6510% decline vs a <10% decline in HBsAg at Week 12 was associated with HBsAg clearance rates of 16% vs 4%. Hepatocellular carcinoma incidence was lower than REACH-B (Risk Estimation for Hepatocellular Carcinoma in Chronic Hepatitis B) model predictions. Conclusions Sustained off-treatment immune control is achieved with peginterferon alfa-2a in a real-world setting. HBsAg clearance 3 years after completion of peginterferon alfa-2a can be predicted on the basis of on-treatment HBsAg kinetics

Structure of the outer layers of cool standard stars

Context: Among late-type red giants, an interesting change occurs in the structure of the outer atmospheric layers as one moves to later spectral types in the Hertzsprung-Russell diagram: a chromosphere is always present, but the coronal emission diminishes and a cool massive wind steps in. Aims: Where most studies have focussed on short-wavelength observations, this article explores the influence of the chromosphere and the wind on long-wavelength photometric measurements. Methods: The observational spectral energy distributions are compared with the theoretical predictions of the MARCS atmosphere models for a sample of 9 K- and M-giants. The discrepancies found are explained using basic models for flux emission originating from a chromosphere or an ionized wind. Results: For 7 out of 9 sample stars, a clear flux excess is detected at (sub)millimeter and/or centimeter wavelengths. The precise start of the excess depends upon the star under consideration. The flux at wavelengths shorter than about 1 mm is most likely dominated by an optically thick chromosphere, where an optically thick ionized wind is the main flux contributor at longer wavelengths. Conclusions: Although the optical to mid-infrared spectrum of the studied K- and M-giants is well represented by a radiative equilibrium atmospheric model, the presence of a chromosphere and/or ionized stellar wind at higher altitudes dominates the spectrum in the (sub)millimeter and centimeter wavelength ranges. The presence of a flux excess also has implications on the role of these stars as fiducial spectrophotometric calibrators in the (sub)millimeter and centimeter wavelength range.Comment: 13 pages, 6 figures, 7 pages of online material, submitted to A&

The key science drivers for the Atacama Large Aperture Submillimeter Telescope (AtLAST)

Sub-mm and mm wavelengths provide a unique view of the Universe, from the gas and dust that fills and surrounds galaxies to the chromosphere of our own Sun. Current single-dish facilities have presented a tantalising view of the brightest (sub-)mm sources, and interferometers have provided the exquisite resolution necessary to analyse the details in small fields, but there are still many open questions that cannot be answered with current facilities: Where are all the baryons? How do structures interact with their environments? What does the time-varying (sub-)mm sky look like? In order to make major advances on these questions and others, what is needed now is a facility capable of rapidly mapping the sky spatially, spectrally, and temporally, which can only be done by a high throughput, single-dish observatory. An extensive design study for this new facility is currently being undertaken. In this paper, we focus on the key science drivers and the requirements they place on the observatory. As a 50m single dish telescope with a 1–2° field of view, the strength of the Atacama Large Aperture Submillimeter Telescope (AtLAST) is in science where a large field of view, highly multiplexed instrumentation and sensitivity to faint large-scale structure is important. AtLAST aims to be a sustainable, upgradeable, multipurpose facility that will deliver orders of magnitude increases in sensitivity and mapping speeds over current and planned telescopes

Interpretation of HINODE SOT/SP asymmetric Stokes profiles observed in quiet Sun network and internetwork

We present the first interpretation of the Stokes profile asymmetries measured in the FeI 630 nm lines by SOT/SP, in both quiet Sun internetwork (IN) and network regions. The inversion is carried out under the hypothesis of MISMA, where the unresolved structure is assumed to be optically thin. We analyze a 29.52"x31.70" subfield carefully selected to be representative of the properties of a 302"x162" quiet Sun field-of-view at disk center. The inversion code is able to reproduce the observed asymmetries in a very satisfactory way. The inversion code interprets 25% of inverted profiles as emerging from pixels in which both positive and negative polarities coexist. kG field strengths are found at the base of the photosphere in both network and IN; in the case of the latter, both kG fields and hG fields are admixed. When considering the magnetic properties at the mid photosphere most kG fields are gone, and the statistics is dominated by hG fields. We constrain the magnetic field of only 4.5% of the analyzed photosphere (and this percentage reduces to 1.3% when referred to all pixels, including those with low polarization not analyzed). The rest of the plasma is consistent with the presence of weak fields not contributing to the detected polarization signals. The average flux densities derived in the full subfield and in IN regions are higher than the ones derived from the same dataset by Milne-Eddington inversion. The existence of large asymmetries in SOT/SP polarization profiles is uncovered. These are not negligible in quiet Sun data. The MISMA inversion code reproduces them in a satisfactory way, and provides a statistical description of the magnetized IN and network which partly differs and complements the results obtained so far. From this it follows the importance of having a complete interpretation of the line profile shapes.Comment: 11 pages, 9 figures, 1 table - Accepted for publication on A&