129 research outputs found

    Development of Autonomous Multi Agent System for Multi-Hazard Risk Assessment

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    Developing autonomous multi agent systems are to be considered anadvancement of multi agent systems can be applied in both the physical and the logicalworld. Constructions of multi hazard risk assessment using spatial data for disastermanagement have a problem of effective communication because of implicitknowledge. Risk assessment is the determination of quantitative or qualitative value ofrisk related to a concrete situation and a recognized hazard. Multi hazard riskassessment requires commonsense knowledge related with the hazard. This complicatesthe effective communication of data to the user in real-time machine processing insupport of disaster management. The aim of the approach is to identify the influences ofdeveloping autonomous multi agent systems for risk assesmnet in disaster management.The objectives should a) contribute to a better understanding of the transformationprocesses in commonsense knowledge related with a hazard and b) provide effectivecommunication of data to the user in real-time machine processing in support of disastermanagement.In this paper we present a metodology to modeling commonsenseknowledge in Multi hazard risk assessment using Autonomous multi agent system. Thisgives three-phase knowledge modeling approach for modeling commonsenseknowledge in, which enables holistic approach for disaster management. At the initialstage autonomous agents are initialized to convert commonsense knowledge based onmulti hazards into a questionnaire. Removing dependencies among the questions aremodeled using principal component analysis. Classification of the knowledge isprocessed through fuzzy logic agent, which is constructed on the basis of principalcomponents. Further explanations for classified knowledge are derived by agent basedon expert system technology. We have implemented the system using FLEX expertsystem shell, SPSS, XML and VB. This paper describes one such approach usingclassification of human constituents in Ayurvedic medicine. Evaluation of the systemhas shown 77% accuracy.Key words: Autonomous multi agent systems, Multi hazards, risk assessment,commonsense knowledge, Fuzzy logi

    Prostatic trypsin-like kallikrein-related peptidases (KLKs) and other prostate-expressed tryptic proteinases as regulators of signalling via proteinase-activated receptors (PARs)

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    The prostate is a site of high expression of serine proteinases including members of the kallikrein-related peptidase (KLK) family, as well as other secreted and membrane-anchored serine proteinases. It has been known for some time that members of this enzyme family elicit cellular responses by acting directly on cells. More recently, it has been recognised that for serine proteinases with specificity for cleavage after arginine and lysine residues (trypsin-like or tryptic enzymes) these cellular responses are often mediated by cleavage of members of the proteinase-activated receptor (PAR) family - a four member sub-family of G protein-coupled receptors. Here, we review the expression of PARs in prostate, the ability of prostatic trypsin-like KLKs and other prostate-expressed tryptic enzymes to cleave PARs, as well as the prostate cancer-associated consequences of PAR activation. In addition, we explore the dysregulation of trypsin-like serine proteinase activity through the loss of normal inhibitory mechanisms and potential interactions between these dysregulated enzymes leading to aberrant PAR activation, intracellular signalling and cancer-promoting cellular changes

    Identification of claudin-4 as a marker highly overexpressed in both primary and metastatic prostate cancer

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    In the quest for markers of expression and progression for prostate cancer (PCa), the majority of studies have focussed on molecular data exclusively from primary tumours. Although expression in metastases is inferred, a lack of correlation with secondary tumours potentially limits their applicability diagnostically and therapeutically. Molecular targets were identified by examining expression profiles of prostate cell lines using cDNA microarrays. Those genes identified were verified on PCa cell lines and tumour samples from both primary and secondary tumours using real-time RT–PCR, western blotting and immunohistochemistry. Claudin-4, coding for an integral membrane cell-junction protein, was the most significantly (P<0.00001) upregulated marker in both primary and metastatic tumour specimens compared with benign prostatic hyperplasia at both RNA and protein levels. In primary tumours, claudin-4 was more highly expressed in lower grade (Gleason 6) lesions than in higher grade (Gleason ⩾7) cancers. Expression was prominent throughout metastases from a variety of secondary sites in fresh-frozen and formalin-fixed specimens from both androgen-intact and androgen-suppressed patients. As a result of its prominent expression in both primary and secondary PCas, together with its established role as a receptor for Clostridium perfringens enterotoxin, claudin-4 may be useful as a potential marker and therapeutic target for PCa metastases

    Utility of Pathology Imagebase for Standardization of Prostate Cancer Grading

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    Aims: Despite efforts to standardise grading of prostate cancer, even among experts there is still a considerable variation in grading practices. In this study we describe the use of Pathology Imagebase, a novel reference image library, for setting an international standard in prostate cancer grading. Methods and results: The International Society of Urological Pathology (ISUP) recently launched a reference image database supervised by experts. A panel of 24 international experts in prostate pathology reviewed independently microphotographs of 90 cases of prostate needle biopsies with cancer. A linear weighted kappa of 0.67 (95% confidence interval = 0.62-0.72) and consensus was reached in 50 cases. The interobserver weighted kappa varied from 0.48 to 0.89. The highest level of agreement was seen for Gleason score (GS) 3 + 3 = 6 (ISUP grade 1), while higher grades and particularly GS 4 + 3 = 7 (ISUP grade 3) showed considerable disagreement. Once a two-thirds majority was reached, images were moved automatically into a public database available for all ISUP members at www.isupweb.org. Non-members are able to access a limited number of cases. Conclusions: It is anticipated that the database will assist pathologists to calibrate their grading and, hence, decrease interobserver variability. It will also help to identify instances where definitions of grades need to be clarified

    Cancer Biomarker Discovery: The Entropic Hallmark

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    Background: It is a commonly accepted belief that cancer cells modify their transcriptional state during the progression of the disease. We propose that the progression of cancer cells towards malignant phenotypes can be efficiently tracked using high-throughput technologies that follow the gradual changes observed in the gene expression profiles by employing Shannon's mathematical theory of communication. Methods based on Information Theory can then quantify the divergence of cancer cells' transcriptional profiles from those of normally appearing cells of the originating tissues. The relevance of the proposed methods can be evaluated using microarray datasets available in the public domain but the method is in principle applicable to other high-throughput methods. Methodology/Principal Findings: Using melanoma and prostate cancer datasets we illustrate how it is possible to employ Shannon Entropy and the Jensen-Shannon divergence to trace the transcriptional changes progression of the disease. We establish how the variations of these two measures correlate with established biomarkers of cancer progression. The Information Theory measures allow us to identify novel biomarkers for both progressive and relatively more sudden transcriptional changes leading to malignant phenotypes. At the same time, the methodology was able to validate a large number of genes and processes that seem to be implicated in the progression of melanoma and prostate cancer. Conclusions/Significance: We thus present a quantitative guiding rule, a new unifying hallmark of cancer: the cancer cell's transcriptome changes lead to measurable observed transitions of Normalized Shannon Entropy values (as measured by high-throughput technologies). At the same time, tumor cells increment their divergence from the normal tissue profile increasing their disorder via creation of states that we might not directly measure. This unifying hallmark allows, via the the Jensen-Shannon divergence, to identify the arrow of time of the processes from the gene expression profiles, and helps to map the phenotypical and molecular hallmarks of specific cancer subtypes. The deep mathematical basis of the approach allows us to suggest that this principle is, hopefully, of general applicability for other diseases

    FOREIGN EXCHANGE MARKET EFFICIENCY ACROSS COUNTRIES AND WITHIN SRI LANKA

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    A market is considered to be efficient, if it fully and correctly reflect all available information in determining asset prices which is referred to as the Efficient Market Hypothesis. If markets are efficient, no arbitrage profits could be exploited. The first objective of the study is to investigate the foreign exchange market efficiency among six currencies in the South and East Asia using their respective spot exchange rates. The results revealed that all foreign exchange market pairs in the sample except India and Sri Lanka are not co-integrated thus providing evidence of market efficiency across those countries. Within country efficiency is tested only for Sri Lanka by investigating the co-integration between 1-month forward exchange rates and the corresponding future spot rate. The empirical findings proved that 1-month forward exchange rate and spot rate are co-integrated; indicating Sri Lanka’s foreign exchange market is efficient. Keywords: Foreign exchange markets, Spot Exchange rate, Forward Exchange Rate, EfficiencyFor full paper: [email protected]

    Significance of stromal reaction patterns in invasive urothelial carcinoma

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    We evaluated the types, frequency, and significance of stromal reaction patterns in urothelial carcinoma (UC) of the bladder in 60 transurethrally resected pT1 specimens (low-grade UC, 12; high-grade UC, 48). We observed 5 reaction patterns with 1 pattern in 37 cases (62%) and 2 or more patterns in the remainder Dominant and secondary patterns, respectively, were as follows: stromal retraction, 30 (50%) and 4 (7%); edema, 18 (30%) and 1 (2%); inflammation, 8 (13%) and 14 (23%); fibroblastic proliferation, 3 (5%) and 5 (8%); fibrosis, 1 (2%) and 4 (7%). Progression occurred in 21 cases, including 9 (30%) of 30 with stromal retraction, 8 (45%) of 18 with edema, 2 (25%) of 8 with inflammation, 1 (33%) of 3 with fibroblastic proliferation, and 1 (100%) of 1 with fibrosis. Differences in progression rates and mean progression-free survival times were not statistically significant. We found that the most common stromal reaction in UC of the bladder is stromal retraction. Stromal reaction patterns seem to have some prognostic usefulness. Cases with stromal edema might benefit from closer follow-up. Awareness of the different types of stromal reactions also is useful for diagnosing invasion
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