Looking into DNA breathing dynamics via quantum physics

We study generic aspects of bubble dynamics in DNA under time dependent perturbations, for example temperature change, by mapping the associated Fokker-Planck equation to a quantum time-dependent Schroedinger equation with imaginary time. In the static case we show that the eigenequation is exactly the same as that of the $\beta$-deformed nuclear liquid drop model, without the issue of non-integer angular momentum. A universal breathing dynamics is demonstrated by using an approximate method in quantum mechanics. The calculated bubble autocorrelation function qualitatively agrees with experimental data. Under time dependent modulations, utilizing the adiabatic approximation, bubble properties reveal memory effects.Comment: 5 pages, 1 figur

TDRSS orbit determination using short baseline differenced carrier phase

This paper discusses a covariance study on the feasibility of using station-differenced carrier phase on short baselines to track the TDRSS satellites. Orbit accuracies for the TDRSS using station-differenced carrier phase data and range data collected from White Sands, NM are given for various configurations of ground stations and range data precision. A one-sigma-position position accuracy of 25 meters can be achieved using two orthogonal baselines of 100 km for the station-differenced phase data and range data with 1 m accuracy. Relevant configuration parameters for the tracking system and important sources of error are examined. The ability of these data to redetermine the position after a station keeping maneuver is addressed. The BRTS system, which is currently used for TDRSS orbit determination, is briefly described and its errors are given for comparison

Calculating the relative entropy of entanglement

We extend Vedral and Plenio's theorem (theorem 3 in Phys. Rev. A 57, 1619) to a more general case, and obtain the relative entropy of entanglement for a class of mixed states, this result can also follow from Rains' theorem 9 in Phys. Rev. A 60, 179.Comment: 2 pages, RevTex, an important reference adde

Monte-Carlo approach to calculate the ionization of warm dense matter within particle-in-cell simulations

A physical model based on a Monte-Carlo approach is proposed to calculate the ionization dynam- ics of warm dense matters (WDM) within particle-in-cell simulations, and where the impact (col- lision) ionization (CI), electron-ion recombination (RE) and ionization potential depression (IPD) by surrounding plasmas are taken into consideration self-consistently. When compared with other models, which are applied in the literature for plasmas near thermal equilibrium, the temporal re- laxation of ionization dynamics can also be simulated by the proposed model. Besides, this model is general and can be applied for both single elements and alloys with quite different composi- tions. The proposed model is implemented into a particle-in-cell (PIC) code, with (final) ionization equilibriums sustained by competitions between CI and its inverse process (i.e., RE). Comparisons between the full model and model without IPD or RE are performed. Our results indicate that for bulk aluminium in the WDM regime, i) the averaged ionization degree increases by including IPD; while ii) the averaged ionization degree is significantly over estimated when the RE is neglected. A direct comparison from the PIC code is made with the existing models for the dependence of averaged ionization degree on thermal equilibrium temperatures, and shows good agreements with that generated from Saha-Boltzmann model or/and FLYCHK code.Comment: 7 pages, 4 figure