Going nuclear: gene family evolution and vertebrate phylogeny reconciled

Gene duplications have been common throughout vertebrate evolution, introducing paralogy and so complicating phylogenctic inference from nuclear genes. Reconciled trees are one method capable of dealing with paralogy, using the relationship between a gene phylogeny and the phylogeny of the organisms containing those genes to identify gene duplication events. This allows us to infer phylogenies from gene families containing both orthologous and paralogous copies. Vertebrate phylogeny is well understood from morphological and palaeontological data, but studies using mitochondrial sequence data have failed to reproduce this classical view. Reconciled tree analysis of a database of 118 vertebrate gene families supports a largely classical vertebrate phylogeny

Plate-impact loading of cellular structures formed by selective laser melting

Porous materials are of great interest because of improved energy absorption over their solid counterparts. Their properties, however, have been difficult to optimize. Additive manufacturing has emerged as a potential technique to closely define the structure and properties of porous components, i.e. density, strut width and pore size; however, the behaviour of these materials at very high impact energies remains largely unexplored. We describe an initial study of the dynamic compression response of lattice materials fabricated through additive manufacturing. Lattices consisting of an array of intersecting stainless steel rods were fabricated into discs using selective laser melting. The resulting discs were impacted against solid stainless steel targets at velocities ranging from 300 to 700 m s-1 using a gas gun. Continuum CTH simulations were performed to identify key features in the measured wave profiles, while 3D simulations, in which the individual cells were modelled, revealed details of microscale deformation during collapse of the lattice structure. The validated computer models have been used to provide an understanding of the deformation processes in the cellular samples. The study supports the optimization of cellular structures for application as energy absorbers. © 2014 IOP Publishing Ltd

90GHz and 150GHz observations of the Orion M42 region. A sub-millimeter to radio analysis

We have used the new 90GHz MUSTANG camera on the Robert C. Byrd Green Bank Telescope (GBT) to map the bright Huygens region of the star-forming region M42 with a resolution of 9" and a sensitivity of 2.8mJy/beam. 90GHz is an interesting transition frequency, as MUSTANG detects both the free-free emission characteristic of the HII region created by the Trapezium stars, normally seen at lower frequencies, and thermal dust emission from the background OMC1 molecular cloud, normally mapped at higher frequencies. We also present similar data from the 150GHz GISMO camera taken on the IRAM telescope. This map has 15" resolution. By combining the MUSTANG data with 1.4, 8, and 21GHz radio data from the VLA and GBT, we derive a new estimate of the emission measure (EM) averaged electron temperature of Te = 11376K by an original method relating free-free emission intensities at optically thin and optically thick frequencies. Combining ISO-LWS data with our data, we derive a new estimate of the dust temperature and spectral emissivity index within the 80" ISO-LWS beam toward OrionKL/BN, Td = 42K and Beta=1.3. We show that both Td and Beta decrease when going from the HII region and excited OMC1 interface to the denser UV shielded part of OMC1 (OrionKL/BN, Orion S). With a model consisting of only free-free and thermal dust emission we are able to fit data taken at frequencies from 1.5GHz to 854GHz.Comment: 18 pages, 8 figures, submitted to the Astrophysical Journa

The Einstein 3-form G_a and its equivalent 1-form L_a in Riemann-Cartan space

The definition of the Einstein 3-form G_a is motivated by means of the contracted 2nd Bianchi identity. This definition involves at first the complete curvature 2-form. The 1-form L_a is defined via G_a = L^b \wedge #(o_b \wedge o_a). Here # denotes the Hodge-star, o_a the coframe, and \wedge the exterior product. The L_a is equivalent to the Einstein 3-form and represents a certain contraction of the curvature 2-form. A variational formula of Salgado on quadratic invariants of the L_a 1-form is discussed, generalized, and put into proper perspective.Comment: LaTeX, 13 Pages. To appear in Gen. Rel. Gra

Using Geospatial Information Technologies to Identify Factors Affecting Grazing Distribution on Grasslands

The relationship between environmental and management factors and grazing livestock distribution is fundamental to understanding and improving grazing systems. With the advent of geospatial information technologies, global positioning systems (GPS) and geographic information systems (GIS) have been used to improve the efficiency and effectiveness of quantifying the distribution of livestock grazing in response to various independent variables (Bailey et al., 2001). The specific objective of this project was to develop a tool that enables managers and students to identify and study the effect of management and environmental factors on grazing livestock distribution

MUSTANG: 90 GHz Science with the Green Bank Telescope

MUSTANG is a 90 GHz bolometer camera built for use as a facility instrument on the 100 m Robert C. Byrd Green Bank radio telescope (GBT). MUSTANG has an 8 by 8 focal plane array of transition edge sensor bolometers read out using time-domain multiplexed SQUID electronics. As a continuum instrument on a large single dish MUSTANG has a combination of high resolution (8") and good sensitivity to extended emission which make it very competitive for a wide range of galactic and extragalactic science. Commissioning finished in January 2008 and some of the first science data have been collected.Comment: 9 Pages, 5 figures, Presented at the SPIE conference on astronomical instrumentation in 200

Microphase separation in Pr0.67Ca0.33MnO3 by small angle neutron scattering

We have evidenced by small angle neutron scattering at low temperature the coexistence of ferromagnetism (F) and antiferromagnetism (AF) in Pr0.67Ca0.33MnO3. The results are compared to those obtained in Pr0.80Ca0.20MnO3 and Pr0.63Ca0.37MnO3, which are F and AF respectively. Quantitative analysis shows that the small angle scattering is not due to a mesoscopic mixing but to a nanoscopic electronic and magnetic ''red cabbage'' structure, in which the ferromagnetic phase exists in form of thin layers in the AF matrix (stripes or 2D ''sheets'').Comment: 4 figure

Phases saturation control on mixing driven reactions in 3D porous media

Transported chemical reactions in unsaturated porous media are relevant across a range of environmental and industrial applications. Continuum scale dispersive models are often based on equivalent parameters derived from analogy with saturated conditions, and cannot appropriately account for processes such as incomplete mixing. It is also unclear how the third dimension controls mixing and reactions in unsaturated conditions. We obtain 3$D$ experimental images of the phases distribution and of transported chemical reaction by Magnetic Resonance Imaging (MRI) using an immiscible non-wetting liquid as a second phase and a fast irreversible bimolecular reaction. Keeping the P\'eclet number (Pe) constant, we study the impact of phases saturation on the dynamics of mixing and the reaction front. By measuring the local concentration of the reaction product, we quantify temporally resolved effective reaction rate ($R$). We describe the temporal evolution of $R$ using the lamellar theory of mixing, which explains faster than Fickian ($t^{0.5}$) rate of product formation by accounting for the deformation of mixing interface between the two reacting fluids. For a given Pe, although stretching and folding of the reactive front are enhanced as saturation decreases, enhancing the product formation, this is larger as saturation increases, i.e., volume controlled. After breakthrough, the extinction of the reaction takes longer as saturation decreases because of the larger non-mixed volume behind the front. These results are the basis for a general model to better predict reactive transport in unsaturated porous media not achievable by the current continuum paradigm