172 research outputs found

    Diagnosis of Laboratories of Physics and Chemistry in the Universidad Tecnica De Manabi

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    The following work tries to diagnose the capacities in function of the management of the maintenance of the infrastructure of the laboratories of Physics and Chemistry of the Technical University of Manabí, having as reference the external and internal relations of the processes of maintenance, for the fulfillment Of this purpose a strategic diagnosis of the Universidad Técnica de Manabí (UTM) and the identification of the critical relations of the activities of maintenance of the laboratories of Physics and Chemistry of the UTM and its evaluation of the level of integration is realized

    Preface

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    These proceedings contain the papers of the Third International Workshop on Recent Trends in News Informa-tion Retrieval (NewsIR\u201919) held in conjunction with the ACM SIGIR 2019 conference in Paris, France, on the25thof July 2019. Ten full papers and two short papers (one position paper and one demo paper) were selectedby the programme committee from a total of 21 submissions. Each submitted paper was reviewed by at leastthree members of an international programme committee. In addition to the selected papers, the workshopfeatures one keynote and one invited talk. The Keynote speech is given by Aron Pilhofer \u201cFrom Redlining toRobots: How newsrooms apply technology to the craft of journalism\u201d. The invited talk is given by FriedrichLindenberg \u201cMining Leaks and Open Data to Follow the Money\u201d. We would like to thank SIGIR for hostingus. Thanks also go to the keynote speakers, the program committee, the paper authors, and the participants,for without these people there would be no worksho

    QGIS AND OPEN DATA CUBE APPLICATIONS FOR LOCAL CLIMATE ZONES ANALYSIS LEVERAGING PRISMA HYPERSPECTRAL SATELLITE DATA

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    Climate change poses a significant threat to humans and biodiversity, impacting various aspects of livelihoods, infrastructure, and ecosystems. Understanding climate change and its interaction with the environment is crucial for achieving Sustainable Development Goals. Local Climate Zones (LCZ) play a key role in comprehending climate change by categorizing urban areas also based on their thermal characteristics. This study presents prototype open-source software tools developed to integrate ground and satellite data for LCZ analysis in the Metropolitan City of Milan (Northern Italy). These tools consist of a QGIS plugin to access and preprocess ground-based meteorological sensor data and a client-server platform, based on the Open Data Cube and Docker technologies, for the exploitation of multispectral and hyperspectral satellite data in LCZ mapping and analysis. The tools’ architecture, data retrieval methods, and analysis capabilities are described in detail. The QGIS plugin facilitates the access and preprocessing of ground-based sensor data within the user-friendly QGIS environment. The platform enables seamless ground-sensor and satellite data management and analysis, using Jupyter Notebooks as an interface to support programmatic operations on the data. The proposed tools provide a framework for studying climate change and its local impacts on urban environments, with the potential of empowering users to effectively analyze and mitigate its effects

    Sensitive screening of single nucleotide polymorphisms in cell free DNA for diagnosis of gestational tumours

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    Tumours expressing human chorionic gonadotropin (hCG), the majority of which are difficult to biopsy due to their vascularity, have disparate prognoses depending on their origin. As optimal management relies on accurate diagnosis, we aimed to develop a sensitive cell free DNA (cfDNA) assay to non-invasively distinguish between cases of gestational and non-gestational origin. Deep error-corrected Illumina sequencing of 195 common single nucleotide polymorphisms (SNPs) in cfDNA and matched genomic DNA from 36 patients with hCG-secreting tumours (serum hCG 5 to 3,042,881 IU/L) and 7 controls with normal hCG levels (≤ 4 IU/L) was performed. cfDNA from confirmed gestational tumours with hCG levels ranging from 1,497 to 700,855 IU/L had multiple (n ≥12) ‘non-host’ alleles (i.e. alleles of paternal origin). In such cases the non-host fraction of cfDNA ranged from 0.3% - 40.4% and correlated with serum hCG levels. At lower hCG levels the ability to detect non-host cfDNA was variable, with the detection limit dependent on the type of causative pregnancy. Patients with non-gestational tumours were identifiable by the absence of non-host cfDNA, with copy number alterations detectable in the majority of cases. Following validation in a larger cohort, our sensitive assay will enable clinicians to better inform patients, for whom biopsy is inappropriate, of their prognosis and provide optimum management

    DNA methylation and nucleosome occupancy regulate the cancer germline antigen gene MAGEA11

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    MAGEA11 is a cancer germline (CG) antigen and androgen receptor co-activator. Its expression in cancers other than prostate, and its mechanism of activation, has not been reported. In silico analyses reveal that MAGEA11 is frequently expressed in human cancers, is increased during tumor progression, and correlates with poor prognosis and survival. In prostate and epithelial ovarian cancers (EOC), MAGEA11 expression was associated with promoter and global DNA hypomethylation, and with activation of other CG genes. Pharmacological or genetic inhibition of DNA methyltransferases (DNMTs) and/or histone deacetylases (HDACs) activated MAGEA11 in a cell line specific manner. MAGEA11 promoter activity was directly repressed by DNA methylation, and partially depended on Sp1, as pharmacological or genetic targeting of Sp1 reduced MAGEA11 promoter activity and endogenous gene expression. Importantly, DNA methylation regulated nucleosome occupancy specifically at the -1 positioned nucleosome of MAGEA11. Methylation of a single Ets site near the transcriptional start site (TSS) correlated with -1 nucleosome occupancy and, by itself, strongly repressed MAGEA11 promoter activity. Thus, DNA methylation regulates nucleosome occupancy at MAGEA11, and this appears to function cooperatively with sequence-specific transcription factors to regulate gene expression. MAGEA11 regulation is highly instructive for understanding mechanisms regulating CG antigen genes in human cancer
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