Unravelling the hybrid vigor in domestic equids: the effect of hybridization on bone shape variation and covariation

Hybridization has been widely practiced in plant and animal breeding as a means to enhance the quality and fitness of the organisms. In domestic equids, this hybrid vigor takes the form of improved physical and physiological characteristics, notably for strength or endurance. Because the offspring of horse and donkey is generally sterile, this widely recognized vigor is expressed in the first generation (F1). However, in the absence of recombination between the two parental genomes, F1 hybrids can be expected to be phenotypically intermediate between their parents which could potentially restrict the possibilities of an increase in overall fitness. In this study, we examine the morphology of the main limb bones of domestic horses, donkeys and their hybrids to investigate the phenotypic impact of hybridization on the locomotor system. We explore bone shape variation and covariation to gain insights into the morphological and functional expressions of the hybrid vigor commonly described in domestic equids

Flowfield Uncertainty Analysis for Hypersonic CFD Simulations

Uncertainty quantification (UQ) in the hypersonic flow regime offers valuable information to determine physical models in need of improvement and to assist in design of vehicles and flight experiments. Here we present results of UQ analysis based on polynomial chaos method to determine flowfield and surface heat flux uncertainty under typical blunt-body re-entry conditions. The NASA Langley code, LAURA, was used for axisymmetric CFD calculations of chemically reacting hypersonic flow over FIRE-II configuration. A third order polynomial chaos (PC) method using the Gauss-Hermite quadrature was applied for determining probability density functions and moments of output quantities. Input parameters such as freestream density, velocity, and temperature were varied and the propagation of their corresponding uncertainties on output properties of interest through the flowfield were studied. An order of magnitude increase in surface heat flux uncertainties was observed for an input freestream velocity uncertainty of ±100 ft/s, or 0.29%. This parameter thus has the greatest sensitivity to variations, and conversely the freestream temperature has the least sensitivity

The use of paleoclimate simulations to refine the environmental and chronological context of archaeological/paleontological sites

This study illustrates the strong potential of combining paleoenvironmental reconstructions and paleoclimate modeling to refine the paleoenvironmental and chronological context of archaeologicaland paleontological sites. We focus on the El Harhoura 2 cave (EH2), an archeological site located on the North-Atlantic coast of Morocco that covers a period from the Late Pleistocene to the mid-Holocene. On several stratigraphic layers, inconsistencies are observed between species- and isotope-based inferences used to reconstruct paleoenvironmental conditions. The stratigraphy of EH2 also shows chronological inconsistencies on older layers between age estimated by Optical Stimulated Luminescence (OSL) and Combination of Uranium Series and Electron Spin Resonance methods (combined US-ESR). We performed paleoclimate simulations to infer the global paleoclimate variations over the EH2 sequence in the area, and we conducted a consistency approach between paleoclimatereconstruction estimated from simulations and available from EH2 paleoenvironmental inferences. Our main conclusion show that the climate sequence based on combined US-ESR ages is more consistent with paleoenvironmental inferences than the climate sequence based on OSL ages. We also evidence that isotope-based inferences are more congruent with the paleoclimate sequence than species-based inferences. These results highlight the difference in scale between the information provided by each ofthese paleoenvironmental proxies. Our approach is transferable to other sites due to the increase number of available paleoclimate simulations.1 Introduction 2 Material and methods 2.1 El Harhoura 2 cave 2.1.1 Presentation of the site 2.1.2 Chronostratigraphy and dating hypotheses 2.1.3 Paleoenvironmental variables 2.2 Paleoclimate reconstruction 2.2.1 Climate model 2.2.2 Paleoclimate simulations 2.2.3 Sea-surface boundary conditions 2.2.4 A subset of key paleoclimate variables 2.3 Consistency analyses 3 Results 3.1. Simulated climate changes 3.2 Consistency between paleoclimate simulations and paleoenvironmental inferences 3.2.1 Association of paleoclimate simulations and stratigraphic layers 3.2.2 Consistency analyses 4 Discussion 4.1 Paleoclimate variation and underlying forcings 4.2 Paleoclimate simulations and chronostratigraphy 4.3 Paleoclimate simulations and paleoenvironmental inferences 5 Conclusion

The use of paleoclimatic simulations to refine the environmental and chronological context of archaeological/paleontological sites

To reconstruct the paleoenvironmental and chronological context of archaeological/paleontological sites is a key step to understand the evolutionary history of past organisms. Commonly used method to infer paleoenvironments rely on varied proxies such as faunal assemblages and isotopes. However, those proxies often show some inconsistencies. Regarding estimated ages of stratigraphic layers, they can vary depending on the dating method used. In this paper, we tested the potential of paleoclimate simulations to address this issue and contribute to the description of the environmental and chronological context of archaeological/paleontological sites. We produced a set of paleoclimate simulations corresponding to the stratigraphy of a Late-Pleistocene Holocene site, El Harhoura 2 (Morocco), and compared the climatic sequence described by these simulations to environmental inferences made from isotopes and faunal assemblages. Our results showed that in the studied site combined US-ESR ages were much more congruent with paleoenvironmental inferences than OSL ages. In addition, climatic variations were found to be more consistent with isotopic studies than faunal assemblages, allowing us to discuss unresolved discrepancies to date. This study illustrates the strong potential of our approach to refine the paleoenvironmental and chronological context of archaeological and paleontological sites.1 Introduction 2 Material and methods 2.1 El Harhoura 2 cave 2.2 Paleoclimate simulations 2.2.1 Pre-existing ensemble of simulations 2.2.2 Model 2.2.3 Sea-surface boundary conditions 2.3 Climate variations through EH2 sequence 3 Results 3.1 Paleoclimate simulations 3.2 Climate variations through EH2 sequence 4 Discussion 5 Conclusio

2-Dust : a Dust Radiative Transfer Code for an Axisymmetric System

We have developed a general purpose dust radiative transfer code for an axisymmetric system, 2-Dust, motivated by the recent increasing availability of high-resolution images of circumstellar dust shells at various wavelengths. This code solves the equation of radiative transfer following the principle of long characteristic in a 2-D polar grid while considering a 3-D radiation field at each grid point. A solution is sought through an iterative scheme in which self-consistency of the solution is achieved by requiring a global luminosity constancy throughout the shell. The dust opacities are calculated through Mie theory from the given size distribution and optical properties of the dust grains. The main focus of the code is to obtain insights on (1) the global energetics of dust grains in the shell (2) the 2-D projected morphologies that are strongly dependent on the mixed effects of the axisymmetric dust distribution and inclination angle of the shell. Here, test models are presented with discussion of the results. The code can be supplied with a user-defined density distribution function, and thus, is applicable to a variety of dusty astronomical objects possessing the axisymmetric geometry.Comment: To be published in ApJ, April 2003 issue; 13 pages, 4 tables, 17 figures, 5-page appendix (no figures for the main text included in this preprint). For the complete preprint and code distribution, contact the author

The neural substrate of orientation short-term memory and resistance to distractor items

Abstract We used Positron Emission Tomography to map the neural substrate of human short-term memory for orientation, de®ned as retaining a single orientation in memory over a long delay, by comparing a successive discrimination task with a 6-s delay to the same task with a brief 0.3 s delay and to an identi®cation control task. Short-term memory engaged the superior parietal lobe bilaterally, the middle occipital gyrus bilaterally and the left dorsolateral prefrontal cortex. In addition, we studied the resistance to a distractor item by comparing the successive discrimination task with long delay, with and without an intervening distractor stimulus. This manipulative process engaged left ventral premotor cortex and left dorsolateral prefrontal cortex. The activation of left dorsolateral prefrontal cortex is interpreted as re¯ecting co-ordination between task components. These results, combined with those of two previous studies using an identical reduction strategy, underscore the functional heterogeneity in the prefrontal cortex during short-term and working memory

Considering the Case for Biodiversity Cycles: Reexamining the Evidence for Periodicity in the Fossil Record

Medvedev and Melott (2007) have suggested that periodicity in fossil biodiversity may be induced by cosmic rays which vary as the Solar System oscillates normal to the galactic disk. We re-examine the evidence for a 62 million year (Myr) periodicity in biodiversity throughout the Phanerozoic history of animal life reported by Rohde & Mueller (2005), as well as related questions of periodicity in origination and extinction. We find that the signal is robust against variations in methods of analysis, and is based on fluctuations in the Paleozoic and a substantial part of the Mesozoic. Examination of origination and extinction is somewhat ambiguous, with results depending upon procedure. Origination and extinction intensity as defined by RM may be affected by an artifact at 27 Myr in the duration of stratigraphic intervals. Nevertheless, when a procedure free of this artifact is implemented, the 27 Myr periodicity appears in origination, suggesting that the artifact may ultimately be based on a signal in the data. A 62 Myr feature appears in extinction, when this same procedure is used. We conclude that evidence for a periodicity at 62 Myr is robust, and evidence for periodicity at approximately 27 Myr is also present, albeit more ambiguous.Comment: Minor modifications to reflect final published versio

Oxidative stress and endothelial function in normal pregnancy versus pre-eclampsia, a combined longitudinal and case control study

Background: Pre-eclampsia (PE) is related to an impaired endothelial function. Endothelial dysfunction accounts for altered vascular reactivity, activation of the coagulation cascade and loss of vascular integrity. Impaired endothelial function originates from production of inflammatory and cytotoxic factors by the ischemic placenta and results in systemic oxidative stress (OS) and an altered bioavailability of nitric oxide (·NO). The free radical ·NO, is an endogenous endothelium-derived relaxing factor influencing endothelial function. In placental circulation, endothelial release of ·NO dilates the fetal placental vascular bed, ensuring feto-maternal exchange. The Endopreg study was designed to evaluate in vivo endothelial function and to quantify in vitro OS in normal and pre-eclamptic pregnancies. Methods/design: The study is divided into two arms, a prospective longitudinal study and a matched case control study. In the longitudinal study, pregnant patients ≥18 years old with a singleton pregnancy will be followed throughout pregnancy and until 6 months post-partum. In the case control study, cases with PE will be compared to matched normotensive pregnant women. Maternal blood concentration of superoxide (O2·) and placental concentration of ·NO will be determined using EPR (electron paramagnetic resonance). Endothelial function and arterial stiffness will be evaluated using respectively Peripheral Arterial Tonometry (PAT), Flow-Mediated Dilatation (FMD) and applanation tonometry. Placental expression of eNOS (endothelial NOS) will be determined using immune-histochemical staining. Target recruitment will be 110 patients for the longitudinal study and 90 patients in the case-control study. Discussion: The results of Endopreg will provide longitudinal information on in vivo endothelial function and in vitro OS during normal pregnancy and PE. Adoption of these vascular tests in clinical practice potentially predicts patients at risk to develop cardiovascular events later in life after PE pregnancies. ·NO, O2·- and eNOS measurements provide further inside in the pathophysiology of PE

Oxidative stress and endothelial function in normal pregnancy versus pre-eclampsia, a combined longitudinal and case control study

Background: Pre-eclampsia (PE) is related to an impaired endothelial function. Endothelial dysfunction accounts for altered vascular reactivity, activation of the coagulation cascade and loss of vascular integrity. Impaired endothelial function originates from production of inflammatory and cytotoxic factors by the ischemic placenta and results in systemic oxidative stress (OS) and an altered bioavailability of nitric oxide (·NO). The free radical ·NO, is an endogenous endothelium-derived relaxing factor influencing endothelial function. In placental circulation, endothelial release of ·NO dilates the fetal placental vascular bed, ensuring feto-maternal exchange. The Endopreg study was designed to evaluate in vivo endothelial function and to quantify in vitro OS in normal and pre-eclamptic pregnancies. Methods/design: The study is divided into two arms, a prospective longitudinal study and a matched case control study. In the longitudinal study, pregnant patients ≥18 years old with a singleton pregnancy will be followed throughout pregnancy and until 6 months post-partum. In the case control study, cases with PE will be compared to matched normotensive pregnant women. Maternal blood concentration of superoxide (O2·) and placental concentration of ·NO will be determined using EPR (electron paramagnetic resonance). Endothelial function and arterial stiffness will be evaluated using respectively Peripheral Arterial Tonometry (PAT), Flow-Mediated Dilatation (FMD) and applanation tonometry. Placental expression of eNOS (endothelial NOS) will be determined using immune-histochemical staining. Target recruitment will be 110 patients for the longitudinal study and 90 patients in the case-control study. Discussion: The results of Endopreg will provide longitudinal information on in vivo endothelial function and in vitro OS during normal pregnancy and PE. Adoption of these vascular tests in clinical practice potentially predicts patients at risk to develop cardiovascular events later in life after PE pregnancies. ·NO, O2·- and eNOS measurements provide further inside in the pathophysiology of PE

Quantitative cardiovascular magnetic resonance in pregnant women: cross-sectional analysis of physiological parameters throughout pregnancy and the impact of the supine position

There are physiological reasons for the effects of positioning on hemodynamic variables and cardiac dimensions related to altered intra-abdominal and intra-thoracic pressures. This problem is especially evident in pregnant women due to the additional aorto-caval compression by the enlarged uterus. The purpose of this study was to investigate the effect of postural changes