Cell-cycle dependent organization and dynamics of RNA Polymerase I in live human cells

RNA Polymerase I (Pol I) is responsible for over 60% of transcriptional output in human cells, yet basic questions concerning the spatial and temporal organization of the polymerase remain unanswered. Here we investigate how mammalian cells rely on Pol I organization throughout the cell cycle to balance different needs, from complete transcription shut down to massive increase in protein synthesis (and thus ribosomal RNA synthesis) before cell division. In contrast to our previous reports on RNA Polymerase II, Pol I clusters are stable with active transcription, and the presence of transient Pol I clusters correlates with inactive ribosomal transcription. Our results suggest that both stable and transient populations Pol I clusters co-exist in individual living cells, and their relative fraction may directly reflect the global gene expression need of the cell

Voices in methods development

To mark the 15th anniversary of Nature Methods, we asked scientists from across diverse fields of basic biology research for their views on the most exciting and essential methodological challenges that their communities are poised to tackle in the near future

Voices in methods development

To mark the 15th anniversary of Nature Methods, we asked scientists from across diverse fields of basic biology research for their views on the most exciting and essential methodological challenges that their communities are poised to tackle in the near future

Long-term effect of forest and landscape restoration practices on soil organic carbon stock in semi-arid Burkina Faso

In semi-arid areas, forest and landscape restoration (FLR) practices are being implemented to reverse the land degradation process. The objective of this study was to investigate the long-term effect of FLR practices on soil organic carbon stock (SOCs) under different land uses in the semi-arid region of Burkina Faso. The study was conducted on degraded land under rehabilitation practices for 45, 27, 18 and 11 years, which were compared to similar land without specific rehabilitation measures. The soil was collected in 2018 in 35 sampling plots of 30 m x 30 m. Soil analysis concerned bulk density, soil particle size, soil pH, soil organic carbon content, and respiratory activity of microorganisms. SOCs increased by 150%, 98% and 29% over 0-10 cm depth in 45-, 27- and 11-year of FLR practices, and decreased by 6% in 18-year of FLR practices compared to their respective control. SOCs were not linearly increased with the duration of the implementation of FLR practices because the variation of SOCs depends on several other parameters such as soil texture, and types of combination of FLR practices. The highest SOCs were recorded for 27 years (9.5 t.ha-1) and 45 years (8.5 t.ha-1) of FLR practices. This study revealed the importance of including Assisted Natural Regeneration (ANR) as one of the combined FLR practices, for improvement of SOCs