Red Algal Mitochondrial Genomes Are More Complete than Previously Reported

The enslavement of an alpha-proteobacterial endosymbiont by the last common eukaryotic ancestor resulted in large-scale gene transfer of endosymbiont genes to the host nucleus as the endosymbiont transitioned into the mitochondrion. Mitochondrial genomes have experienced widespread gene loss and genome reduction within eukaryotes and DNA sequencing has revealed that most of these gene losses occurred early in eukaryotic lineage diversification. On a broad scale, more recent modifications to organelle genomes appear to be conserved and phylogenetically informative. The first red algal mitochondrial genome was sequenced more than 20 years ago, and an additional 29 Florideophyceae mitochondria have been added over the past decade. A total of 32 genes have been described to have been missing or considered non-functional pseudogenes from these Florideophyceae mitochondria. These losses have been attributed to endosymbiotic gene transfer or the evolution of a parasitic life strategy. Here we sequenced the mitochondrial genomes from the red algal parasite Choreocolax polysiphoniae and its host Vertebrata lanosa and found them to be complete and conserved in structure with other Florideophyceae mitochondria. This result led us to resequence the previously published parasite Gracilariophila oryzoides and its host Gracilariopsis andersonii, as well as reevaluate reported gene losses from published Florideophyceae mitochondria. Multiple independent losses of rpl20 and a single loss of rps11 can be verified. However by reannotating published data and resequencing specimens when possible, we were able to identify the majority of genes that have been reported as lost or pseudogenes from Florideophyceae mitochondria

Endomorphisms and automorphisms of locally covariant quantum field theories

In the framework of locally covariant quantum field theory, a theory is described as a functor from a category of spacetimes to a category of *-algebras. It is proposed that the global gauge group of such a theory can be identified as the group of automorphisms of the defining functor. Consequently, multiplets of fields may be identified at the functorial level. It is shown that locally covariant theories that obey standard assumptions in Minkowski space, including energy compactness, have no proper endomorphisms (i.e., all endomorphisms are automorphisms) and have a compact automorphism group. Further, it is shown how the endomorphisms and automorphisms of a locally covariant theory may, in principle, be classified in any single spacetime. As an example, the endomorphisms and automorphisms of a system of finitely many free scalar fields are completely classified.Comment: v2 45pp, expanded to include additional results; presentation improved and an error corrected. To appear in Rev Math Phy

Lagrangian Trajectory Modeling of Lunar Dust Particles

Apollo landing videos shot from inside the right LEM window, provide a quantitative measure of the characteristics and dynamics of the ejecta spray of lunar regolith particles beneath the Lander during the final 10 [m] or so of descent. Photogrammetry analysis gives an estimate of the thickness of the dust layer and angle of trajectory. In addition, Apollo landing video analysis divulges valuable information on the regolith ejecta interactions with lunar surface topography. For example, dense dust streaks are seen to originate at the outer rims of craters within a critical radius of the Lander during descent. The primary intent of this work was to develop a mathematical model and software implementation for the trajectory simulation of lunar dust particles acted on by gas jets originating from the nozzle of a lunar Lander, where the particle sizes typically range from 10 micron to 500 micron. The high temperature, supersonic jet of gas that is exhausted from a rocket engine can propel dust, soil, gravel, as well as small rocks to high velocities. The lunar vacuum allows ejected particles to travel great distances unimpeded, and in the case of smaller particles, escape velocities may be reached. The particle size distributions and kinetic energies of ejected particles can lead to damage to the landing spacecraft or to other hardware that has previously been deployed in the vicinity. Thus the primary motivation behind this work is to seek a better understanding for the purpose of modeling and predicting the behavior of regolith dust particle trajectories during powered rocket descent and ascent

Searching at the right time of day: Evidence for aqueous minerals in Columbus crater with TES and THEMIS data

The primary objective of the Thermal Emission Imaging System (THEMIS) experiment, which has been in orbit at Mars since early 2002, is to identify minerals associated with hydrothermal and subaqueous environments. Data from THEMIS have supported the presence of clays, silica-rich deposits, and chlorides but has not before provided definitive evidence for the presence of sulfates. This is an especially puzzling result given that sulfates have been extensively identified with other instruments at Mars. If present, sufficiently exposed, and in high enough abundances, such minerals should be detectable in orbital thermal infrared spectra at the resolution of THEMIS. The extended mission proposal for THEMIS on Mars Odyssey suggests that the detection of all minerals may be enhanced by observing at an earlier time of day and thus at warmer temperatures. Therefore, in 2009, Odyssey moved to an earlier orbit time. Here, we examine THEMIS data collected when the earlier orbit time coincided with the Martian local (southern) late summer (Ls = 270) for Columbus crater where Compact Reconnaissance Imaging Spectrometer for Mars (CRISM) data have detected a number of aqueous minerals. Some of the warmest THEMIS images show evidence for aqueous minerals, although not in the same locations where CRISM finds the highest concentrations. Several factors contribute to this result, including differences in the diurnal temperature curve and levels of induration and particle size. For THEMIS, earlier time-of-day and proper seasonal observations combine to provide warm surface temperatures and ideal low atmospheric opacity that significantly increases the ability to definitively identify low spectral contrast aqueous minerals at the surface of Mars

Modification of Roberts' Theory for Rocket Exhaust Plumes Eroding Lunar Soil

In preparation for the Apollo program, Leonard Roberts developed a remarkable analytical theory that predicts the blowing of lunar soil and dust beneath a rocket exhaust plume. Roberts' assumed that the erosion rate is determined by the "excess shear stress" in the gas (the amount of shear stress greater than what causes grains to roll). The acceleration of particles to their final velocity in the gas consumed a portion of the shear stress. The erosion rate continues to increase until the excess shear stress is exactly consumed, thus determining the erosion rate. He calculated the largest and smallest particles that could be eroded based on forces at the particle scale, but the erosion rate equation assumes that only one particle size exists in the soil. He assumed that particle ejection angles are determined entirely by the shape of the terrain, which acts like a ballistic ramp, the particle aerodynamics being negligible. The predicted erosion rate and particle upper size limit appeared to be within an order of magnitude of small-scale terrestrial experiments, but could not be tested more quantitatively at the time. The lower particle size limit and ejection angle predictions were not tested

Multi sensor transducer and weight factor

A multi-sensor transducer and processing method allow insitu monitoring of the senor accuracy and transducer `health`. In one embodiment, the transducer has multiple sensors to provide corresponding output signals in response to a stimulus, such as pressure. A processor applies individual weight factors to reach of the output signals and provide a single transducer output that reduces the contribution from inaccurate sensors. The weight factors can be updated and stored. The processor can use the weight factors to provide a `health` of the transducer based upon the number of accurate versus in-accurate sensors in the transducer

Cratering and Blowing Soil by Rocket Engines During Lunar Landings

This paper is a summary compilation of work accomplished over the past decade at NASA’s Kennedy Space Center to understand the interactions between rocket exhaust gases and the soil of the Moon or Mars. This research is applied to a case study of the Apollo 12 landing, in which the blowing soil peppered the nearby Surveyor III spacecraft producing measurable surface damage, and to the Apollo 15 landing, in which the Lunar Module tilted backwards after landing in a crater that was obscured from sight by the blowing dust. The modeling coupled with empirical observations is generally adequate to predict the order of magnitude of effects in future lunar missions and to formulate a rough concept for mitigating the spray around a lunar base. However, there are many significant gaps in our understanding of the physics and more effort is needed to understand the problem of blowing soil so that specific technologies can be developed to support the lunar outpost

Magnetic Field, Force, and Inductance Computations for an Axially Symmetric Solenoid

The pumping of liquid oxygen (LOX) by magnetic fields (B field), using an array of electromagnets, is a current topic of research and development at Kennedy Space Center, FL. Oxygen is paramagnetic so that LOX, like a ferrofluid, can be forced in the direction of a B field gradient. It is well known that liquid oxygen has a sufficient magnetic susceptibility that a strong magnetic gradient can lift it in the earth's gravitational field. It has been proposed that this phenomenon can be utilized in transporting (i.e., pumping) LOX not only on earth, but on Mars and in the weightlessness of space. In order to design and evaluate such a magnetic pumping system, it is essential to compute the magnetic and force fields, as well as inductance, of various types of electromagnets (solenoids). In this application, it is assumed that the solenoids are air wrapped, and that the current is essentially time independent