Post-Reproductive Pacific Salmon, Oncorhynchus spp., as a Major Nutrient Source for Large Aggregations of Gulls, Larus spp.

On the Pacific coast of North America, the most abundant vertebrate visitors to estuaries and rivers during salmon migration are gulls, yet the utilization of salmon nutrients by these scavengers, and subsequent ecological impacts are not well documented. On two forested watersheds on the central coast of British Columbia, we tracked gull abundance during the spawning period for two consecutive years, and estimated consumption of post-reproductive salmon carcasses and eggs, as well as guano production. At Clatse River, gulls (Larus glaucescens, L. argentatus, L. thayerii, L. californicus, L. canus, L. philadelphia) consumed 13-26% of total salmon carcass biomass and 29-36% of all salmon eggs deposited in the system. At Neekas River, gulls consumed 11-19% of salmon carcass biomass and 7-18% of total salmon eggs. Local guano production over the 60-day period ranged from 600 kg to 1190 kg at Clatse and from 1200 kg to 2100 kg at Neekas River, and was distributed to marine, estuarine, freshwater and riparian habitats. The large aggregations of gulls and subsequent nutrient cycling observed on our study watersheds may represent a once widespread phenomenon that is now largely reduced due to recent declines in salmon populations

Seasonal variation and impact of waste-water lagoons as larval habitat on the population dynamics of Culicoides sonorensis (Diptera:Ceratpogonidae) at two dairy farms in northern California.

The Sacramento (northern Central) Valley of California (CA) has a hot Mediterranean climate and a diverse ecological landscape that is impacted extensively by human activities, which include the intensive farming of crops and livestock. Waste-water ponds, marshes, and irrigated fields associated with these agricultural activities provide abundant larval habitats for C. sonorensis midges, in addition to those sites that exist in the natural environment. Within this region, C. sonorensis is an important vector of bluetongue (BTV) and related viruses that adversely affect the international trade and movement of livestock, the economics of livestock production, and animal welfare. To characterize the seasonal dynamics of immature and adult C. sonorensis populations, abundance was monitored intensively on two dairy farms in the Sacramento Valley from August 2012- to July 2013. Adults were sampled every two weeks for 52 weeks by trapping (CDC style traps without light and baited with dry-ice) along N-S and E-W transects on each farm. One farm had large operational waste-water lagoons, whereas the lagoon on the other farm was drained and remained dry during the study. Spring emergence and seasonal abundance of adult C. sonorensis on both farms coincided with rising vernal temperature. Paradoxically, the abundance of midges on the farm without a functioning waste-water lagoon was increased as compared to abundance on the farm with a waste-water lagoon system, indicating that this infrastructure may not serve as the sole, or even the primary larval habitat. Adult midges disappeared from both farms from late November until May; however, low numbers of parous female midges were detected in traps set during daylight in the inter-seasonal winter period. This latter finding is especially critical as it provides a potential mechanism for the "overwintering" of BTV in temperate regions such as northern CA. Precise documentation of temporal changes in the annual abundance and dispersal of Culicoides midges is essential for the creation of models to predict BTV infection of livestock and to develop sound abatement strategies

Do changes in health reveal the possibility of undiagnosed pancreatic cancer? Development of a risk-prediction model based on healthcare claims data.

Background and objectiveEarly detection methods for pancreatic cancer are lacking. We aimed to develop a prediction model for pancreatic cancer based on changes in health captured by healthcare claims data.MethodsWe conducted a case-control study on 29,646 Medicare-enrolled patients aged 68 years and above with pancreatic ductal adenocarcinoma (PDAC) reported to the Surveillance Epidemiology an End Results (SEER) tumor registries program in 2004-2011 and 88,938 age and sex-matched controls. We developed a prediction model using multivariable logistic regression on Medicare claims for 16 risk factors and pre-diagnostic symptoms of PDAC present within 15 months prior to PDAC diagnosis. Claims within 3 months of PDAC diagnosis were excluded in sensitivity analyses. We evaluated the discriminatory power of the model with the area under the receiver operating curve (AUC) and performed cross-validation by bootstrapping.ResultsThe prediction model on all cases and controls reached AUC of 0.68. Excluding the final 3 months of claims lowered the AUC to 0.58. Among new-onset diabetes patients, the prediction model reached AUC of 0.73, which decreased to 0.63 when claims from the final 3 months were excluded. Performance measures of the prediction models was confirmed by internal validation using the bootstrap method.ConclusionModels based on healthcare claims for clinical risk factors, symptoms and signs of pancreatic cancer are limited in classifying those who go on to diagnosis of pancreatic cancer and those who do not, especially when excluding claims that immediately precede the diagnosis of PDAC

A polarizable interatomic force field for TiO2_2 parameterized using density functional theory

We report a classical interatomic force field for TiO$_2$, which has been parameterized using density functional theory forces, energies, and stresses in the rutile crystal structure. The reliability of this new classical potential is tested by evaluating the structural properties, equation of state, phonon properties, thermal expansion, and some thermodynamic quantities such as entropy, free energy, and specific heat under constant volume. The good agreement of our results with {\em ab initio} calculations and with experimental data, indicates that our force-field describes the atomic interactions of TiO$_2$ in the rutile structure very well. The force field can also describe the structures of the brookite and anatase crystals with good accuracy.Comment: Accepted for publication in Phys. Rev. B; Changes from v1 include multiple minor revisions and a re-write of the description of the force field in Section II

Late Proterozoic Patsy Springs Canyon, Adelaide Geosyncline: Submarine or Subaerial Origin?

A significant aspect of Late Proterozoic sedimentation in the Adelaide Geosyncline, South Australia, is the presence of kilometre-deep erosional incisions which have been termed canyons. These structures were formerly described to be of submarine origin, cut and filled in an inferred basin-slope setting by subaqueous processes. Subsequent detailed research, particularly on a specific incision known as Patsy Springs Canyon, indicates that sedimentary structures within some of the canyon-filling sediments are indicative of deposition above fair weather wave base. In addition, an unusual carbonate unit, which is observed to veneer upper portions of canyon shoulders and to contribute to carbonate breccias interbedded with canyon-fill, has a stable isotope signature which may imply a non-marine origin. The presence of the carbonate veneer, where it is in situ, suggests that at least upper portions of the canyons could have been emergent during the canyon-filling phase. Considering these observations, and combining them with regional stratigraphical relationships, an alternative model for canyon genesis is proposed involving subaerial erosion and subsequent filling by coastal onlap. Such a model requires base-level changes of the order of 1 km, in order to account for observed canyon cutting and filling. Vertical movements associated with halokinesis, or thermally-induced uplift of the order of 1 km, could have resulted in the observed erosional events. Alternatively, a Messinian-style evaporitic lowering of base-level is currently receiving serious attention. With present knowledge this mechanism most satisfactorily explains all observations

Projectile fragmentation of 129Xe at Elab=790 AMeV

We have measured production yields and longitudinal momentum distributions of projectile-like fragments in the reaction 129Xe + 27Al at an energy of Elab=790 AMeV. Production cross sections higher than expected from systematics were observed for nuclei in the neutron-deficient tails of the isotopic distributions. A comparison with previously measured data from the fragmentation of 136Xe ions shows that the production yields strongly depend on the neutron excess of the projectile with respect to the line of beta-stability. The momentum distributions exhibit a dependence on the fragment neutron-to-proton ratio in isobaric chains, which was not expected from systematics so far. This can be interpreted by a higher excitation of the projectile during the formation of neutron-deficient fragments.Comment: 21 pages, 8 figures, 1 tabl

The Impact of Phase Equilibrium Cloud Models on GCM Simulations of GJ~1214b

We investigate the impact of clouds on the atmosphere of GJ~1214b using the radiatively-coupled, phase-equilibrium cloud model {\sc EddySed} coupled to the {\sc Unified Model} general circulation model. We find that, consistent with previous investigations, high metallicity ($100\times$ solar) and clouds with large vertical extents (a sedimentation factor of $f_\mathrm{sed} = 0.1$) are required to best match the observations, although metallicities even higher than those investigated here may be required to improve agreement further. We additionally find that in our case which best matches the observations ($f_\mathrm{sed}=0.1$), the velocity structures change relative to the clear sky case with the formation of a superrotating jet being suppressed, although further investigation is required to understand the cause of the suppression. The increase in cloud extent with $f_\mathrm{sed}$ results in a cooler planet due to a higher albedo, causing the atmosphere to contract. This also results in a reduced day-night contrast seen in the phase curves, although the introduction of cloud still results in a reduction of the phase offset. We additionally investigate the impact the the {\sc Unified Model}'s pseudo-spherical irradiation scheme on the calculation of heating rates, finding that the introduction of nightside shortwave heating results in slower mid-latitude jets compared to the plane parallel irradiation scheme used in previous works. We also consider the impact of a gamma distribution, as opposed to a log-normal distribution, for the distribution of cloud particle radii and find the impact to be relatively minor.Comment: Accepted to MNRA

Detrital Zircon Provenance of Mesoproterozoic to Cambrian Arenites in the Western United States and Northwestern Mexico

U-Pb isotopic dating of detrital zircon from supracrustal Proterozoic and Cambrian arenites from the western United States and northern Mexico reveal three main age groups, 1.90 to 1.62 Ga, 1.45 to 1.40 Ga, and 1.2 to 1.0 Ga. Small amounts of zircons with ages of 3.1 to 2.5 Ga, 1.57 Ga, 1.32 Ga, 1.26 Ga, 0.7 Ga, and 0.5 Ga are also present. Detrital zircons ranging in age from 1.90 to 1.62 Ga and from 1.45 to 1.40 Ga are considered to have been derived from Proterozoic crystalline basement rocks of these known ages, and probably in part from reworked Proterozoic supracrustal sedimentary rocks, of the western United States. The 1.2 to 1.0 Ga detrital zircon ages from California, Arizona, and Sonora are characterized by distinct spikes (1.11 Ga, in particular) in the age-probability plots. These spikes are interpreted to indicate the influx of zircon from major silicic volcanic fields. Igneous rocks such as the Pikes Peak Granite (1.093 Ga) of Colorado, and the Aibo Granite (1.110 Ga) of Sonora, Mexico, may represent the deeply eroded roots of such volcanic fields. Samples from farther north along the Cordilleran margin that contain abundant 1.2–1.0 Ga detrital zircons do not show spikes in the age distribution, but rather ages spread out across the entire 1.2–1.0 Ga range. These age spectra resemble those for detrital zircons from the Grenville province, which is considered their source. Less common detrital zircons had a variety of sources. Zircons ranging in age from 3.36 to 2.31 Ga were apparently derived from inland parts of the North American continent from Wyoming to Canada. Zircons of about 1.577 Ga are highly unusual and may have had an exotic source; they may have come from Australia and been deposited in North America when Australia and North America were juxtaposed as part of the hypothetical Rodinian supercontinent. Detrital zircon of ∼1.320 Ga apparently had the same source as that for tuff (1.320 Ga) in the Pioneer Shale of the Apache Group in Arizona. Detrital zircons of about 1.26 Ga in the Apache Group and Troy Quartzite appear to be related to local, approximately coeval volcanic fields. Zircons of about 0.7 Ga may have had a source in igneous rocks related to rifting of the Proterozoic supercontinent of Rodinia, and 0.5 Ga zircons a source in relatively small areas of granitic rocks of this known, or inferred, age in Oklahoma, Texas, New Mexico, and Colorado