Playing Stackelberg Opinion Optimization with Randomized Algorithms for Combinatorial Strategies

From a perspective of designing or engineering for opinion formation games in social networks, the "opinion maximization (or minimization)" problem has been studied mainly for designing subset selecting algorithms. We furthermore define a two-player zero-sum Stackelberg game of competitive opinion optimization by letting the player under study as the first-mover minimize the sum of expressed opinions by doing so-called "internal opinion design", knowing that the other adversarial player as the follower is to maximize the same objective by also conducting her own internal opinion design. We propose for the min player to play the "follow-the-perturbed-leader" algorithm in such Stackelberg game, obtaining losses depending on the other adversarial player's play. Since our strategy of subset selection is combinatorial in nature, the probabilities in a distribution over all the strategies would be too many to be enumerated one by one. Thus, we design a randomized algorithm to produce a (randomized) pure strategy. We show that the strategy output by the randomized algorithm for the min player is essentially an approximate equilibrium strategy against the other adversarial player

Engineered spin phase diagram of two interacting electrons in semiconductor nanowire quantum dots

Spin properties of two interacting electrons in a quantum dot (QD) embedded in a nanowire with controlled aspect ratio and longitudinal magnetic fields are investigated by using a configuration interaction (CI) method and exact diagonalization (ED) techniques. The developed CI theory based on a three-dimensional (3D) parabolic model provides explicit formulations of the Coulomb matrix elements and allows for straightforward and efficient numerical implementation. Our studies reveal fruitful features of spin singlet-triplet transitions of two electrons confined in a nanowire quantum dot (NWQD), as a consequence of the competing effects of geometry-controlled kinetic energy quantization, the various Coulomb interactions, and spin Zeeman energies. The developed theory is further employed to study the spin phase diagram of two quantum-confined electrons in the regime of "cross over" dimensionality, from quasi-two-dimensional (disk-like) QDs to finite one-dimensional (rod-like) QDs.Comment: 9 pages, 6 figure

An integrative analysis of cancer gene expression studies using Bayesian latent factor modeling

We present an applied study in cancer genomics for integrating data and inferences from laboratory experiments on cancer cell lines with observational data obtained from human breast cancer studies. The biological focus is on improving understanding of transcriptional responses of tumors to changes in the pH level of the cellular microenvironment. The statistical focus is on connecting experimentally defined biomarkers of such responses to clinical outcome in observational studies of breast cancer patients. Our analysis exemplifies a general strategy for accomplishing this kind of integration across contexts. The statistical methodologies employed here draw heavily on Bayesian sparse factor models for identifying, modularizing and correlating with clinical outcome these signatures of aggregate changes in gene expression. By projecting patterns of biological response linked to specific experimental interventions into observational studies where such responses may be evidenced via variation in gene expression across samples, we are able to define biomarkers of clinically relevant physiological states and outcomes that are rooted in the biology of the original experiment. Through this approach we identify microenvironment-related prognostic factors capable of predicting long term survival in two independent breast cancer datasets. These results suggest possible directions for future laboratory studies, as well as indicate the potential for therapeutic advances though targeted disruption of specific pathway components.Comment: Published in at http://dx.doi.org/10.1214/09-AOAS261 the Annals of Applied Statistics (http://www.imstat.org/aoas/) by the Institute of Mathematical Statistics (http://www.imstat.org

A CMMI-based approach for medical software project life cycle study

In terms of medical techniques, Taiwan has gained international recognition in recent years. However, the medical information system industry in Taiwan is still at a developing stage compared with the software industries in other nations. In addition, systematic development processes are indispensable elements of software development. They can help developers increase their productivity and efficiency and also avoid unnecessary risks arising during the development process. Thus, this paper presents an application of Light-Weight Capability Maturity Model Integration (LW-CMMI) to Chang Gung Medical Research Project (CMRP) in the Nuclear medicine field. This application was intended to integrate user requirements, system design and testing of software development processes into three layers (Domain, Concept and Instance) model. Then, expressing in structural System Modeling Language (SysML) diagrams and converts part of the manual effort necessary for project management maintenance into computational effort, for example: (semi-) automatic delivery of traceability management. In this application, it supports establishing artifacts of “requirement specification document”, “project execution plan document”, “system design document” and “system test document”, and can deliver a prototype of lightweight project management tool on the Nuclear Medicine software project. The results of this application can be a reference for other medical institutions in developing medical information systems and support of project management to achieve the aim of patient safety. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/2193-1801-2-266) contains supplementary material, which is available to authorized users

Fucosyltransferase 1 and 2 play pivotal roles in breast cancer cells.

FUT1 and FUT2 encode alpha 1, 2-fucosyltransferases which catalyze the addition of alpha 1, 2-linked fucose to glycans. Glycan products of FUT1 and FUT2, such as Globo H and Lewis Y, are highly expressed on malignant tissues, including breast cancer. Herein, we investigated the roles of FUT1 and FUT2 in breast cancer. Silencing of FUT1 or FUT2 by shRNAs inhibited cell proliferation in vitro and tumorigenicity in mice. This was associated with diminished properties of cancer stem cell (CSC), including mammosphere formation and CSC marker both in vitro and in xenografts. Silencing of FUT2, but not FUT1, significantly changed the cuboidal morphology to dense clusters of small and round cells with reduced adhesion to polystyrene and extracellular matrix, including laminin, fibronectin and collagen. Silencing of FUT1 or FUT2 suppressed cell migration in wound healing assay, whereas FUT1 and FUT2 overexpression increased cell migration and invasion in vitro and metastasis of breast cancer in vivo. A decrease in mesenchymal like markers such as fibronectin, vimentin, and twist, along with increased epithelial like marker, E-cadherin, was observed upon FUT1/2 knockdown, while the opposite was noted by overexpression of FUT1 or FUT2. As expected, FUT1 or FUT2 knockdown reduced Globo H, whereas FUT1 or FUT2 overexpression showed contrary effects. Exogenous addition of Globo H-ceramide reversed the suppression of cell migration by FUT1 knockdown but not the inhibition of cell adhesion by FUT2 silencing, suggesting that at least part of the effects of FUT1/2 knockdown were mediated by Globo H. Our results imply that FUT1 and FUT2 play important roles in regulating growth, adhesion, migration and CSC properties of breast cancer, and may serve as therapeutic targets for breast cancer

FFTPL: An Analytic Placement Algorithm Using Fast Fourier Transform for Density Equalization

We propose a flat nonlinear placement algorithm FFTPL using fast Fourier transform for density equalization. The placement instance is modeled as an electrostatic system with the analogy of density cost to the potential energy. A well-defined Poisson's equation is proposed for gradient and cost computation. Our placer outperforms state-of-the-art placers with better solution quality and efficiency

Kinerja Sistem Komunikasi FSO (Free Space Optics) Menggunakan Cell-site Diversity Di Daerah Tropis

Kebutuhan masyarakat akan adanya layanan komunikasi multimedia seperti video conference, high speed internet, video streaming, dan lain sebagainya, saat ini terus meningkat. Untuk memenuhi kebutuhan tersebut, perlu adanya suatu sistem komunikasi nirkabel dengan kecepatan tinggi. Salah satunya yaitu dengan menggunakan FSO (Free Space Optics). FSO merupakan sistem komunikasi yang memungkinkan memiliki koneksi layaknya serat optik, namun media transmisi yang digunakan yaitu melalui atmosfer. Penggunaan FSO di daerah tropis memiliki kendala yang cukup serius yaitu tingginya intensitas curah hujan yang dapat mempengaruhi kinerja dari FSO. Semakin tinggi intensitas curah hujan, maka nilai redaman hujan juga semakin besar. Untuk mengatasi dampak redaman hujan tersebut, maka digunakan teknik cell-site diversity dengan selection combining. Penerapan teknik cell-site diversity pada sistem komunikasi FSO menggunakan variasi panjang lintasan 0,5 km, 1 km, 1,5 km, dan 2 km serta variasi sudut antar link sebesar 45°, 90°, 135°, dan 180°. Hasil dari penerapan teknik cell-site diversity menunjukkan bahwa adanya peningkatan kualitas sinyal FSO, dalam hal ini yaitu nilai SNR. Peningkatan nilai SNR terbesar didapatkan pada panjang lintasan 2 km dengan sudut antar link 180° serta pada link availability 99,9 %. Untuk konfigurasi cell-site diversity terbaik didapatkan pada sudut antar link sebesar 90° dan 180°