86 research outputs found

    Structures and properties of solvated and unsolvated isopropyl functionalised calix[4]arenes

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    The tetra-iso-propyl ethers of calix[4]arene and p-t-butylcalix[4]arene have been isolated in the cone conformation, and structurally characterized as chloroform solvates. Thermogravimetric analysis demonstrated that the parent iso-propylcalix[4]arene solvate is significantly more stable than the p-t-butylcalix[4]arene analogue, retaining the solvent up to a temperature of of 125 °C. It was found that the calix[4]arene ether sublimes at atmospheric pressure, and solvent-free crystals appropriate for structure determination were produced at reduced pressure. The p-t-butylcalix[4]arene ether was also isolated without solvent in the lattice, but in this case the calixarene was crystallized from acetone, as sublimation did not produce crystals of sufficient quality

    Energetics and Possible Formation and Decay Mechanisms of Vortices in Helium Nanodroplets

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    The energy and angular momentum of both straight and curved vortex states of a helium nanodroplet are examined as a function of droplet size. For droplets in the size range of many experiments, it is found that during the pickup of heavy solutes, a significant fraction of events deposit sufficient energy and angular momentum to form a straight vortex line. Curved vortex lines exist down to nearly zero angular momentum and energy, and thus could in principle form in almost any collision. Further, the coalescence of smaller droplets during the cooling by expansion could also deposit sufficient angular momentum to form vortex lines. Despite their high energy, most vortices are predicted to be stable at the final temperature (0.38 K) of helium nanodroplets due to lack of decay channels that conserve both energy and angular momentum.Comment: 10 pages, 8 figures, RevTex 4, submitted to Phys. Rev.

    Zero-point vacancies in quantum solids

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    A Jastrow wave function (JWF) and a shadow wave function (SWF) describe a quantum solid with Bose--Einstein condensate; i.e. a supersolid. It is known that both JWF and SWF describe a quantum solid with also a finite equilibrium concentration of vacancies x_v. We outline a route for estimating x_v by exploiting the existing formal equivalence between the absolute square of the ground state wave function and the Boltzmann weight of a classical solid. We compute x_v for the quantum solids described by JWF and SWF employing very accurate numerical techniques. For JWF we find a very small value for the zero point vacancy concentration, x_v=(1.4\pm0.1) x 10^-6. For SWF, which presently gives the best variational description of solid 4He, we find the significantly larger value x_v=(1.4\pm0.1) x 10^-3 at a density close to melting. We also study two and three vacancies. We find that there is a strong short range attraction but the vacancies do not form a bound state.Comment: 19 pages, submitted to J. Low Temp. Phy

    The Coupling of Alternative Splicing and Nonsense-Mediated mRNA Decay

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    Most human genes exhibit alternative splicing, but not all alternatively spliced transcripts produce functional proteins. Computational and experimental results indicate that a substantial fraction of alternative splicing events in humans result in mRNA isoforms that harbor a premature termination codon (PTC). These transcripts are predicted to be degraded by the nonsense-mediated mRNA decay (NMD) pathway. One explanation for the abundance of PTC-containing isoforms is that they represent splicing errors that are identified and degraded by the NMD pathway. Another potential explanation for this startling observation is that cells may link alternative splicing and NMD to regulate the abundance of mRNA transcripts. This mechanism, which we call "Regulated Unproductive Splicing and Translation" (RUST), has been experimentally shown to regulate expression of a wide variety of genes in many organisms from yeast to human. It is frequently employed for autoregulation of proteins that affect the splicing process itself. Thus, alternative splicing and NMD act together to play an important role in regulating gene expression

    Manipulating the intensity of near-bed turbulence in rivers: effects on benthic invertebrates

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    1. Flow conditions were modified over patches of river bed in three rivers in southwestern Australia to determine the effects of turbulence on benthic invertebrate communities. 2. Artificial structures to increase downstream turbulence were developed in a laboratory flume. In the field, these increased turbulence intensity by 35% for a 20% reduction in velocity. 3. Patches of gravel were placed in each river and turbulence-generating structures allocated randomly to half of these, creating treatment patches. An acoustic Doppler velocimeter was used to measure flow conditions over both treatment and control patches at several heights above the bed. After 6 weeks, the invertebrate fauna of the gravel patches were sampled to examine the response to modified flow conditions. 4. The treatments increased relative turbulence intensity twofold for a reduction in velocity of between 3 and 5 cm s-1, but turbulence intensity was significantly higher in only one of the three rivers. 5. There were no significant effects of increased relative turbulence intensity on any aspect of the invertebrate assemblage. This may be a result of the fairly small increase in relative turbulence intensity created during the experiment, the spatial scale of the manipulation or the types of stream community studied
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