8 research outputs found
A Metagenomic Approach to Characterization of the Vaginal Microbiome Signature in Pregnancy
- Author
- A Chao
- A Renyi
- Adam J. Ratner
- Aleksandar Milosavljevic
- B Haas
- B Manly
- B Tóthmérész
- C Favier
- C Lozupone
- C Quince
- C Reinhardt
- CA Lozupone
- CE Shannon
- CF Favier
- CJ Brown
- Cristian Coarfa
- Curtis Huttenhower
- D Knights
- D Knights
- DG Gavin
- Dirk Gevers
- EG Zoetendal
- EK Costello
- ES Charlson
- FD Ciccarelli
- I Letunic
- Ignatia Van den Veyver
- J Oksanen
- J Penders
- J Penders
- J Qin
- J Ravel
- J Reeder
- James Versalovic
- JG Caporaso
- Joseph Petrosino
- JR Cole
- Jun Ma
- K Kurokawa
- Kevin Riehle
- KJ Aagaard
- Kjersti Aagaard
- KP Riehle
- L Dethlefsen
- L Qin
- LJ Forney
- LJ Forney
- LV Hooper
- M Hamady
- M Li
- MB Kursa
- MG Dominguez-Bello
- MG Dominguez-Bello
- MM Gronlund
- MN Price
- N Fierer
- N Segata
- Nicola Segata
- PB Eckburg
- PJ Turnbaugh
- PJ Turnbaugh
- Q Wang
- R Kindt
- RD Pridmore
- RE Ley
- RE Ley
- RE Ley
- RH Whittaker
- RI Mackie
- Sabeen Raza
- Sean Rosenbaum
- SR Gill
- TK Kim
- Toni-Ann Mistretta
- WW Oswald
- X Xhou
- Y Ye
- Publication venue
- Public Library of Science
- Publication date
- 13/06/2012
- Field of study
While current major national research efforts (i.e., the NIH Human Microbiome Project) will enable comprehensive metagenomic characterization of the adult human microbiota, how and when these diverse microbial communities take up residence in the host and during reproductive life are unexplored at a population level. Because microbial abundance and diversity might differ in pregnancy, we sought to generate comparative metagenomic signatures across gestational age strata. DNA was isolated from the vagina (introitus, posterior fornix, midvagina) and the V5V3 region of bacterial 16S rRNA genes were sequenced (454FLX Titanium platform). Sixty-eight samples from 24 healthy gravidae (18 to 40 confirmed weeks) were compared with 301 non-pregnant controls (60 subjects). Generated sequence data were quality filtered, taxonomically binned, normalized, and organized by phylogeny and into operational taxonomic units (OTU); principal coordinates analysis (PCoA) of the resultant beta diversity measures were used for visualization and analysis in association with sample clinical metadata. Altogether, 1.4 gigabytes of data containing >2.5 million reads (averaging 6,837 sequences/sample of 493 nt in length) were generated for computational analyses. Although gravidae were not excluded by virtue of a posterior fornix pH >4.5 at the time of screening, unique vaginal microbiome signature encompassing several specific OTUs and higher-level clades was nevertheless observed and confirmed using a combination of phylogenetic, non-phylogenetic, supervised, and unsupervised approaches. Both overall diversity and richness were reduced in pregnancy, with dominance of Lactobacillus species (L. iners crispatus, jensenii and johnsonii, and the orders Lactobacillales (and Lactobacillaceae family), Clostridiales, Bacteroidales, and Actinomycetales. This intergroup comparison using rigorous standardized sampling protocols and analytical methodologies provides robust initial evidence that the vaginal microbial 16S rRNA gene catalogue uniquely differs in pregnancy, with variance of taxa across vaginal subsite and gestational age
Asthma controller therapy: role of antileukotrienes, a new therapeutic class
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- Publication venue
- Publication date
- 01/01/1999
- Field of study
Distinctive Neurophysiological Properties of Embryonic Trigeminal and Geniculate Neurons in Culture
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- Publication venue
- 'American Physiological Society'
- Publication date
- Field of study
Reduced Oral Ethanol Avoidance in Mice Lacking Transient Receptor Potential Channel Vanilloid Receptor 1
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- A Szallasi
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- 'Springer Science and Business Media LLC'
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Externality Entrepreneurism
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Loss of Taste, Smell, and Other Senses with Age
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- L’action antibactérienne comparative de différentes pénicillines
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- Neuzeitliche Behandlung der Dermatomykosen unter besonderer BerĂĽcksichtigung der Mikrosporie
- Neuzeitliche Behandlung mit Antibiotica und Sulfonamiden
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- The action of antibiotic combinations on pathogenic staphylococci in vitro
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- The mechanism of action of penicillin
- The rate of bactericidal action of penicillin in vitro as a function of its concentration and its paradoxically reduced activity in high concentrations against certain organisms
- The slow recovery of bacteria from the toxic effects of penicillin
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- Veränderungen der normalen Darmflora unter Tetrazyklingaben
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- Zur Beurteilung der Wirkungsweise von Antibiotica
- Zusammenfassung
- Zusammenhang zwischen Dermatitis und Paraxininjektion
- Ăśber allergische Erscheinungen beim Gebrauch von Antibiotika
- Über die Anwendung der Antibiotika mit begrenztem Wirkungsbereich bei der örtlichen Behandlung von Hautkrankheiten. 1. Mitt. Die Lokalbehandlung mit Tyrothricin. Z. Haut- u. Geschl.-Kr. 20 14 (1956). 2. Mitt. Die Lokalbehandlung mit einer Kombination Tyrothricin und Xanthocillin. Z
- Ăśber die Wirksamkeit der Antibiotica Streptomycin und Tetracyclin bei der Behandlung der Acrodermatitis atrophicans Herxheimer
- Ăśber Penicillinase und ihre Inhibitoren
- Ăśber Penicillingewinnung und Penicillinwertbestimmung
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- 01/01/1961
- Field of study