Intensity-based elastic registration incorporating anisotropic landmark errors and rotational information

Purpose: Thin-plate splines (TPS) represent an effective tool for estimating the deformation that warps one set of landmarks to another based on the physical equivalent of thin metal sheets. In the original formulation, data used to estimate the deformation field are restricted to landmark locations only and thus does not allow to incorporate information about the rotation of the image around the landmark. It furthermore assumes that landmark positions are known exactly which is not the case in real world applications. These localization inaccuracies are propagated to the entire deformation field as each landmark has a global influence. We propose to use a TPS approximation method that incorporates anisotropic landmark errors and rotational information and integrate it into a hierarchical elastic registration framework (HERA). The improvement of the registration performance has been evaluated. Methods: The proposed TPS approximation scheme integrates anisotropic landmark errors with rotational information of the landmarks. The anisotropic landmark errors are represented by their covariance matrices estimated directly from the image data as a minimal stochastic localization error, i.e. the Cramér-Rao bound. The rotational attribute of each landmark is characterized by an additional angular landmark, thus doubling the number of landmarks in the TPS model. This allows the TPS approximation to better cope up with local deformations. Results: We integrated the proposed TPS approach into the HERA registration framework and applied it to register 161 image pairs from a digital mammogram database. Experiments showed that the mean squared error using the proposed TPS approximation was superior to pure TPS interpolation. On artificially deformed breast images HERA, with the proposed TPS approximation, performed significantly better than the state-of-the-art registration method presented by Rueckert. Conclusion: The TPS approximation approach proposed in this publication allows to incorporate anisotropic landmark errors as well as rotational information. The integration of the method into an intensity-based hierarchical non-rigid registration framework is straightforward and improved the registration quality significantl

Control of the MKQA tuning and aperture kickers of the LHC

The large hadron collider (LHC) at CERN has been equipped with four fast pulsed kicker magnets in RA43 situated at point 4 which are part of the measurement system for the tune and the dynamic aperture of the LHC beam (Beam 1 and Beam 2). For the tune measurement 'Q', the magnets will excite oscillations in part of the beam. This is achieved by means of a generator producing a 5 µs base half-sine pulse of 1.2 kA [1] amplitude, superimposed with a 3rd harmonic to produce a 2 µs flat top. A kick repetition rate of 2 Hz will be possible. To measure the dynamic aperture 'A' of the LHC at different beam energies, the same magnets will also be driven by a more powerful generator which produces a 43 µs base half-sine current pulse of 3.8 kA. For the 'A' mode a thyristor is used as switching element inside the generator. A final third mode named 'AC dipole' will rely on the beam being excited coherently at a frequency close but outside its Eigen-frequencies by an oscillating dipole field. The beam is expected to oscillate at the exciter frequency of 3 kHz with a phase shift of π/2. The 'AC dipole' will use two 18 kW audio amplifiers capable of driving the magnets at 1 kHz(rms) around 3 kHz or between 2.7 kHz and 4 kHz. The complete system uses supervisory control implemented with Siemens PLC technology with added Siemens PROFIsafe safety feature to treat the various interlocks that have been introduced in the circuits and to assu re a safe functioning and provide 'LOCAL' and 'REMOTE' control (via CCC) of the complete installation

Effect of the deposition conditions of NiO anode buffer layers inorganic solar cells, on the properties of these cells

tNiO thin films deposited by DC reactive sputtering were used as anode buffer layer in organic photovoltaiccells (OPVs) based on CuPc/C60planar heterojunctions. Firstly we show that the properties of the NiOfilms depend on the O2 partial pressure during deposition. The films are first conductive between 0 and2% partial oxygen pressure, then they are semiconductor and p-type between 2 and 6% partial oxygenpressure, between 6 and 9% partial oxygen pressure the conduction is very low and the films seem to be n-type and finally, for a partial oxygen pressure higher than 9%, the conduction is p-type. The morphology ofthese films depends also on the O2 partial pressure. When the NiO films is thick of 4 nm, its peak to valleyroughness is 6 nm, when it is sputtered with a gas containing 7.4% of oxygen, while it is more than double,13.5 nm, when the partial pressure of oxygen is 16.67%. This roughness implies that a forming process,i.e. a decrease of the leakage current, is necessary for the OPVs. The forming process is not necessary ifthe NiO ABL is thick of 20 nm. In that case it is shown that optimum conversion efficiency is achievedwith NiO ABL annealed 10 min at 400◦C

Engineered Sleeping Beauty Transposon as Efficient System to Optimize Chimp Adenoviral Production

Sleeping Beauty (SB) is the first DNA transposon employed for efficient transposition in vertebrate cells, opening new applications for genetic engineering and gene therapies. A transposon-based gene delivery system holds the favourable features of non-viral vectors and an attractive safety profile. Here, we employed SB to engineer HEK293 cells for optimizing the production of a chimpanzee Adenovector (chAd) belonging to the Human Mastadenovirus C species. To date, chAd vectors are employed in several clinical settings for infectious diseases, last but not least COVID-19. A robust, efficient and quick viral vector production could advance the clinical application of chAd vectors. To this aim, we firstly swapped the hAd5 E1 with chAd-C E1 gene by using the CRISPR/Cas9 system. We demonstrated that in the absence of human Ad5 E1, chimp Ad-C E1 gene did not support HEK293 survival. To improve chAd-C vector production, we engineered HEK293 cells to stably express the chAd-C precursor terminal protein (ch.pTP), which plays a crucial role in chimpanzee Adenoviral DNA replication. The results indicate that exogenous ch.pTP expression significantly ameliorate the packaging and amplification of recombinant chAd-C vectors thus, the engineered HEK293ch.pTP cells could represent a superior packaging cell line for the production of these vectors

Metformin and aspirin treatment could lead to an improved survival rate for Type 2 diabetic patients with stage II and III colorectal adenocarcinoma relative to non-diabetic patients

Metformin, the drug of choice in the treatment of type 2 diabetes mellitus (DM2), in addition to aspirin (ASA), the drug prescribed for cardioprotection of diabetic and non\u2010diabetic patients, have an inhibitory effect on cancer cell survival. The present population\u2010based study conducted in the province of Trieste (Italy), aimed to investigate the prevalence of DM2 in patients with colorectal adenocarcinoma (CRC) and survival for CRC in diabetic and nondiabetic patients. All permanent residents diagnosed with a CRC between 2004 and 2007 were ascertained through the regional health informa\u2010 tion system. CRC\u2010speci c and relative survival probabilities were computed for each group of patients de ned by CRC stage, presence or absence of DM2 treated with metformin, and presence or absence of daily ASA therapy. A total of 515 CRC patients without DM2 and 156 with DM2 treated with metformin were enrolled in the study. At the time of CRC diagnosis, 71 (14%) nondiabetic and 39 (25%) diabetic patients were taking ASA daily. The five\u2010year relative survival for stage III CRC was 101% [95% con dence interval (CI)=76\u2010126] in the 18 patients with DM2 treated with metformin and ASA, 55% (95% CI=31\u201078) in the 23 without DM2 treated with ASA, 55% (95% CI=45\u201065) in the 150 without DM2 not taking ASA, and 29% (95% CI=13\u201045) in the 43 with DM2 treated with metformin, however not with ASA. The ndings support the hypothesis of a possible inhibitory effect of metformin and ASA on CRC cells. Randomized controlled trials are required to verify this hypothesis

Electropolymerization and Morphologic Characterization of α-Tetrathiophene

In this research, poly(α-tetrathiophene), poly(α-TTP), was potentiostatic and potentiodynamically electrosynthesized on Pt and F-doped SnO2 electrodes. The solvent effect (CH2Cl2 and CH3CN) on the nucleation and growth mechanism, NGM, and morphology of the respective deposit was established by potentiostatic method and scanning electron microscopy (SEM), respectively. Potentiodynamic electropolymerization at low sweep rates proved to favor the obtention of a polymer with a more uniform morphology and, in addition, its capacitance as capacitor increased and the p-doping/undoping relationship is close to one (reversible doping). On the other hand, when potentiostatic electropolymerization was realized, deconvolution of the obtained j/t transients revealed that under all conditions, the main contribution to electrolysis at high times (greater than 20 s) was instantaneous nucleation with 3D growth. Nevertheless, the contribution of instantaneous nucleation with 2D growth is always more important in the early stages of the process. However, regardless of the conditions employed in the electropolymerization, the use of an oligomer as starting unit, such as α-TTF, affords deposits with more homogeneous morphology than when the respective monomer is used. Therefore, the information gathered in the current work constitutes a significant contribution that validates the proposed model for the electropolymerization mechanism

Cu-Ag bi-layer films in dielectric/metal/dielectric transparent electrodes as ITO free electrode in organic photovoltaic devices

Among ITO alternative, dielectric/metal/dielectric multilayer structures are one of the most often studied possible substituent. However, if their optical and electrical properties are systematically investigated it is not the same with regard to their mechanical properties. In the present manuscript we have studied the properties of ZnS/Cu/Ag/ZnS, ZnS/Cu/Ag/MO3 (with M ¼ Mo or W) structures. With a maximum transmission of 90% and a sheet resistance of 5 U/sq the optimum structure exhibits a figure of merit of 82 10-3 Ω-1 when l = 600 nm. Beyond these standard measures we proceeded to the study of the mechanical properties of the multilayer structures. The inner and outer bending tests show that the ZnS/ Cu/Ag/ZnS (or MO3) structures are more flexible than ITO, while their responses to scotch tests show that they exhibit a large adhesion to the substrate, glass or plastic. The scratching adhesion test puts in evidence that the adhesion to the substrate of the Ag layer is smaller than that of ZnS/Cu/Ag/ZnS, which is smaller than that of ITO. On the other hand, this test shows that the ZnS/Cu/Ag/ZnS (no cracks for L = 25 N) is less brittle than ITO (cracks L = 15N). Finally, when used as anode in organic solar cells, the structure ZnS/Cu/Ag/WO3 allows achieving the best efficiency, similar to that obtained with ITO