21 research outputs found

    Evaluation of Storage Reallocation and Related Strategies for Optimizing Reservoir System Operations

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    Statement of the Problem Rapid population and economic growth combined with depleting groundwater reserves are resulting in ever increasing demands on surface water resources in Texas, as well as elsewhere. The climate of the state is characterized by extremes of floods and droughts. Reservoirs are necessary to control and utilize the highly variable streamflow. Due to a number of economic, environmental, institutional, and political considerations, construction of new reservoir projects is much more difficult now than in the past. Consequently, optimizing the beneficial use of existing reservoirs is becoming increasingly more important. Reservoir operation is based on the conflicting objectives of maximizing the amount of water available for conservation purposes and maximizing the amount of empty space available for storing future flood waters to reduce downstream damages. Common practice is to operate a reservoir for either flood control only, conservation only, or a combination of flood control and conservation with separate pools designated for each. The conservation and flood control pools, or vertical zones, in a multipurpose project are fixed by a designated top of conservation (bottom of flood control) pool elevation. Conservation pools may be shared by various purposes, such as water supply, hydroelectric power, and recreation, which involve both complementary and conflicting interactions. Public needs and objectives and numerous factors affecting reservoir operation change over time. An increasing necessity to use limited storage capacity as effectively as possible warrants periodic re-evaluations of operating policies. Reallocation of storage capacity between purposes represents a general strategy for optimizing the beneficial use of limited storage capacity in response to changing needs and conditions. A storage reallocation between flood control and conservation purposes typically involves a permanent or seasonal change in the designated top of conservation pool elevation. Reallocations between conservation purposes can be achieved by various modifications of operating policies. Although given relatively little consideration in the past, storage reallocations will likely be proposed more frequently as demands on limited resources increase. Scope of Study This report documents an investigation of: (1) the potential of storage capacity reallocation and other related modifications in operating policies as management strategies for optimizing the beneficial use of existing reservoirs in Texas and (2) modeling capabilities for formulating and evaluating such changes to operating policies. In general, storage reallocations can involve a variety of types of reservoir use. The present study focused primarily on flood control and water supply. Multiple purpose reservoir operations involving hydroelectric power were also investigated. Both permanent conversion of storage capacity between purposes and seasonal rule curve operations were addressed. Buffer pool operations were also considered. Multiple reservoir system operation was a major emphasis of the study. The literature was reviewed and several reservoir management agencies contacted to (1) identify experiences in studying and/or implementing storage reallocations and (2) evaluate the state-of-the-art of associated modeling and analysis capabilities. The feasibility of seasonal rule curve operation depends upon the seasonal characteristics of the various factors affecting reservoir operation. Precipitation, streamflow, reservoir evaporation, water demands, and reservoir storage content data for Texas were analyzed to identify seasonal characteristics. A 12-reservoir system operated by the U.S. Army Corps of Engineers and Brazos River Authority provided a case study for evaluating the potential for storage reallocations and related operating strategies. This system, located in the Brazos River Basin, is considered representative of major reservoirs in Texas. The existing operating policies and possible modifications were investigated. The case study includes (1) flood control storage frequency and conservation drawdown frequency analyses based on the results of monthly hydrologic period-of-record simulations of reservoir system operations and (2) firm yield and reliability analyses. The generalized computer programs HEC-3, HEC-5, STATS, and MOSS-IV, and several utility software packages were used in the modeling study. Simulation of reservoir system operations was based on an 85-year sequence of monthly hydrologic data. The case study provides a preliminary assessment of the viability of permanent storage conversions and/or adoption of seasonal rule curve operations as potential reservoir management strategies. The objective is to evaluate storage reallocation potentialities in general, not develop detailed reallocation plans. The case study is basically a reconnaissance-level hydrologic analysis of reservoir operations. The monthly period-of-record simulations provide a reasonably precise analysis of water supply considerations. However, the daily hydrologic data required for detailed analysis of flood control operations were not included in the study. Reallocation of reservoir storage capacity involves complex institutional, financial, economic, legal, political, and technical considerations not addressed in the case study. However, the hydrologic analyses provide a good starting point for determining what types of reallocation strategies and modeling approaches might be potentially effective and whether more detailed studies are worthwhile. Organization of the Report Chapter 2 is a general discussion of reservoir operation and institutional and technical aspects of storage reallocation and a review of reallocations which have been implemented or proposed throughout the nation. Chapter 3 addresses the seasonality of the hydrologic factors pertinent to seasonal rule curve operation in Texas. Chapter 4 reviews state-of-the-art modeling capabilities and describes the computer models adopted for use in the case study. The Brazos River Basin case study is presented in chapters 5 through 8. Study results are summarized, and conclusions are presented in chapter 9

    Hydrologic and Institutional Water Availability in the Brazos River Basin

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    Statement of the Problem Effective management of its surface water resources is essential to the continued growth and prosperity of the state of Texas. Rapid population and economic growth combined with depleting ground water reserves are resulting in ever-increasing demands being placed upon the surface water resources. The climate of the state is characterized by extremes of floods and droughts. Reservoirs are necessary to control and utilize the highly variable streamflow. Numerous reservoirs have been constructed to facilitate management of the water resources of the various river basins of the state. Effective control and utilization of the water resource supplied by a stream/reservoir system requires an understanding of the amount of water which can be provided under various conditions. Estimates of reservoir yield are a key element in practically all studies and decisions involving development and management of surface water supplies. Yield is defined as the amount of water which can be supplied by an unregulated stream, reservoir, or multiple reservoir system during a specified period of time. The stochastic nature of streamflow must be reflected in methods for quantifying yield. The approaches for expressing yield which traditionally have been used in water supply planning and management are firm yield and, to a lesser extent, reliability. Firm yield is the estimated maximum release or withdrawal rate which can be maintained continuously during a repetition of the hydrologic period-of-record. A number of definitions of reliability are cited in the technical literature. A common definition is that reliability is the percentage of time that a stream/reservoir system is able to meet a specified demand. Precise textbook definitions of firm yield and reliability can be formulated for a simple river basin with one reservoir and one water user. However, in actual practice, for a complex multiple reservoir, multiple user system, firm yield and reliability must be defined in terms of the basic assumptions and approaches used in handling various complicating factors. Water supply planning and management involves complex institutional, environmental, hydrologic, and physical systems. Streamflow, reservoir sedimentation, evaporation, water demands, and other variables pertinent to yield determinations are highly stochastic. Measured historical data is limited in extent and accuracy. The future is always uncertain. Mathematical models only approximate the complexities of reality. Consequently, reservoir yield studies necessarily involve uncertainties and approximations. The availability of water to particular users depends upon legal rights and contractual commitments as well as physical facilities and hydrologic conditions. Reservoir yield is subject to institutional as well as hydrologic constraints. Evaluation of the relationships between water rights and reservoir yield is particularly important at this time in Texas with the recent completion of the water rights adjudication process. Scope of the Study The objective of the study documented by this report was to evaluate and improve state-of-the-art capabilities for estimating reservoir yield. Institutional as well as hydrologic aspects of water availability were investigated. Evaluation of increases in yield achieved by multiple reservoir system operation, rather than separate operation of individual reservoirs, was a major emphasis of the study. The river basin was viewed as an integrated system. The hydrologic and institutional availability of water was investigated for a case study reservoir system. However, the study approach and computer programs used are generally applicable to any reservoir system. Study findings have pertinent implications for water resources management throughout Texas and elsewhere as well as for the specific river basin studied. Water availability is dependent upon institutional constraints and capabilities. The study included a review of water law and other institutional aspects of surface water management in Texas. A literature review was made assessing modeling capabilities for estimating reservoir yield. The reservoir system simulation models HEC-3 and HEC-5 were adopted for use in the case study. These generalized computer programs provide comprehensive capabilities for analyzing the hydrologic aspects of reservoir system operations, but lack the capability to simulate water rights priorities. Consequently, a generalized water rights simulation computer program was developed in conjunction with the study. Other computer programs were used for developing input data and analyzing output from the HEC3, HEC-5, and water rights models. A system of twelve reservoirs in the Brazos River Basin provided a case study. Nine multiple purpose flood control and conservation reservoirs are owned and operated by the Fort Worth District (FWD) of the U.S. Army Corps of Engineers (USACE). The Brazos River Authority (BRA) has contracted for most of the water supply storage capacity of the nine federal projects. The BRA owns and operates three other conservation reservoirs. In addition to the 12-reservoir USACE/BRA system, Hubbard Creek Reservoir, owned by the West Central Texas Municipal Water District, was modeled in detail because of its relatively large storage capacity. The numerous other smaller reservoirs in the basin were considered primarily from the perspective of approximating their impacts on the 12 USACE/BRA reservoirs. Individual reservoir and system firm yields were computed based on alternative conditions of reservoir sedimentation and alternative assumptions regarding multiple reservoir and multiple user interactions. The sensitivity of firm yield estimates to these and other factors was evaluated. A series of yield analyses were made from a strictly hydrologic perspective, without consideration of water rights. Yield analyses were then repeated incorporating water rights constraints. In addition to the firm yield simulations, a basinwide water rights analysis simulation study was performed. The simulations were based on monthly historical period-of-record hydrologic data. The modeling studies provided a basis for evaluating the hydrologic and institutional availability of water in the Brazos River Basin. Organization of the Report An overview of water law and institutions in Texas, from the perspective of surface water Management, is presented in Chapter 2. Surface water Management in the Brazos River Basin is described in Chapter 3. Chapter 4 is 8 discussion of reservoir system yield analysis models in general and the models used in the present study in particular. The Brazos River Basin simulation studies are documented by Chapters 5 through 9. Chapter 5 describes the compilation of basic data used in the study. A detailed hydrologic yield study is documented by Chapter 6. The analyses outlined in Chapter 6 were performed with HEC-3 and HEC-5 and are from a strictly hydrologic perspective, without consideration of water rights. The water rights analyses, utilizing the TAMU Water Rights Analysis Progra , are presented in Chapters 7 and 8. Chapter 7 discusses the results of a simulation of hydrologic and water rights aspects of surface water management in the basin. Firm yields constrained by senior water rights are documented in Chapter 8. Chapter 9 provides a critical evaluation, including sensitivity analyses, of the key factors affecting firm yield estimates. The study summary and conclusions are presented as Chapter 10

    A rare IL33 loss-of-function mutation reduces blood eosinophil counts and protects from asthma.

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    Efst á síðunni er hægt að nálgast greinina í heild sinni með því að smella á hlekkinnIL-33 is a tissue-derived cytokine that induces and amplifies eosinophilic inflammation and has emerged as a promising new drug target for asthma and allergic disease. Common variants at IL33 and IL1RL1, encoding the IL-33 receptor ST2, associate with eosinophil counts and asthma. Through whole-genome sequencing and imputation into the Icelandic population, we found a rare variant in IL33 (NM_001199640:exon7:c.487-1G>C (rs146597587-C), allele frequency = 0.65%) that disrupts a canonical splice acceptor site before the last coding exon. It is also found at low frequency in European populations. rs146597587-C associates with lower eosinophil counts (β = -0.21 SD, P = 2.5×10-16, N = 103,104), and reduced risk of asthma in Europeans (OR = 0.47; 95%CI: 0.32, 0.70, P = 1.8×10-4, N cases = 6,465, N controls = 302,977). Heterozygotes have about 40% lower total IL33 mRNA expression than non-carriers and allele-specific analysis based on RNA sequencing and phased genotypes shows that only 20% of the total expression is from the mutated chromosome. In half of those transcripts the mutation causes retention of the last intron, predicted to result in a premature stop codon that leads to truncation of 66 amino acids. The truncated IL-33 has normal intracellular localization but neither binds IL-33R/ST2 nor activates ST2-expressing cells. Together these data demonstrate that rs146597587-C is a loss of function mutation and support the hypothesis that IL-33 haploinsufficiency protects against asthma.Netherlands Asthma Foundation University Medical Center Groningen Ministry of Health and Environmental Hygiene of Netherlands Netherlands Asthma Stichting Astma Bestrijding BBMRI European Respiratory Society private and public research funds AstraZeneca ALK-Abello, Denmar

    Finishing the euchromatic sequence of the human genome

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    The sequence of the human genome encodes the genetic instructions for human physiology, as well as rich information about human evolution. In 2001, the International Human Genome Sequencing Consortium reported a draft sequence of the euchromatic portion of the human genome. Since then, the international collaboration has worked to convert this draft into a genome sequence with high accuracy and nearly complete coverage. Here, we report the result of this finishing process. The current genome sequence (Build 35) contains 2.85 billion nucleotides interrupted by only 341 gaps. It covers ∼99% of the euchromatic genome and is accurate to an error rate of ∼1 event per 100,000 bases. Many of the remaining euchromatic gaps are associated with segmental duplications and will require focused work with new methods. The near-complete sequence, the first for a vertebrate, greatly improves the precision of biological analyses of the human genome including studies of gene number, birth and death. Notably, the human enome seems to encode only 20,000-25,000 protein-coding genes. The genome sequence reported here should serve as a firm foundation for biomedical research in the decades ahead

    Transcriptomic Profiling of Adipose Derived Stem Cells Undergoing Osteogenesis by RNA-Seq

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    Acute and chronic toxicity studies were conducted on Daphnia pulex using synthetic lead and arsenic water samples. For acute studies, solutions with 0.25, 0.5, 1.0, 2.0, 5.0 mg/L lead and arsenic along with a control were used. The chronic studies were conducted for 21 days using 0.25, 0.5, 1.0 mg/L lead and arsenic solutions along with a control. Results indicated that the LC50 (48 hour) was 4.0 and 3.4 mg/L for lead and arsenic, respectively. Results from chronic studies suggest that the exposure to lead solutions significantly (P \u3c 0.05) impaired the reproduction rates of Daphnia at the 1 mg/L concentration. However, the reproduction rates were enhanced at low concentrations of arsenic (up to 0.5 mg/L). A second chronic study was conducted to confirm this finding. Results from the second study indicated that lead exhibited significantly higher (P \u3c 0.05) toxicity at 0.5 mg/L concentration, while reproduction rates in all concentrations of arsenic solutions were not significantly different from the controls. Metal analysis on exposed Daphnia, following nitric acid digestion procedures, indicated that Daphnia bio-accumulated 75.3-97.2% of the lead added to the experimental containers. This high lead biouptake coupled with the fast growth, high reproduction rates, and short life cycle all suggest that a Daphnia-based remediation (growth and partial harvest) may a viable treatment alternative that is worth considering. However, further field studies have to be conducted to verify this alternative. Biouptake or sequestration by Daphnia of arsenic at all tested concentrations was negligible, thereby, suggesting selective uptake or sequestration by daphnia under the tested pH and temperature conditions

    Glyceollin I Reverses Epithelial to Mesenchymal Transition in Letrozole Resistant Breast Cancer through ZEB1

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    Although aromatase inhibitors are standard endocrine therapy for postmenopausal women with early-stage metastatic estrogen-dependent breast cancer, they are limited by the development of drug resistance. A better understanding of this process is critical towards designing novel strategies for disease management. Previously, we demonstrated a global proteomic signature of letrozole-resistance associated with hormone-independence, enhanced cell motility and implications of epithelial mesenchymal transition (EMT). Letrozole-resistant breast cancer cells (LTLT-Ca) were treated with a novel phytoalexin, glyceollin I, and exhibited morphological characteristics synonymous with an epithelial phenotype and decreased proliferation. Letrozole-resistance increased Zinc Finger E-Box Binding Homeobox 1 (ZEB1) expression (4.51-fold), while glyceollin I treatment caused a −3.39-fold reduction. Immunofluorescence analyses resulted of glyceollin I-induced increase and decrease in E-cadherin and ZEB1, respectively. In vivo studies performed in ovariectomized, female nude mice indicated that glyceollin treated tumors stained weakly for ZEB1 and N-cadherin and strongly for E-cadherin. Compared to letrozole-sensitive cells, LTLT-Ca cells displayed enhanced motility, however in the presence of glyceollin I, exhibited a 68% and 83% decrease in invasion and migration, respectively. These effects of glyceollin I were mediated in part by inhibition of ZEB1, thus indicating therapeutic potential of glyceollin I in targeting EMT in letrozole resistant breast cancer

    Widespread Exposure to Mosquitoborne California Serogroup Viruses in Caribou, Arctic Fox, Red Fox, and Polar Bears, Canada

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    Northern Canada is warming at 3 times the global rate. Thus, changing diversity and distribution of vectors and pathogens is an increasing health concern. California serogroup (CSG) viruses are mosquitoborne arboviruses; wildlife reservoirs in northern ecosystems have not been identified. We detected CSG virus antibodies in 63% (95% CI 58%–67%) of caribou (n = 517), 4% (95% CI 2%–7%) of Arctic foxes (n = 297), 12% (95% CI 6%–21%) of red foxes (n = 77), and 28% (95% CI 24%–33%) of polar bears (n = 377). Sex, age, and summer temperatures were positively associated with polar bear exposure; location, year, and ecotype were associated with caribou exposure. Exposure was highest in boreal caribou and increased from baseline in polar bears after warmer summers. CSG virus exposure of wildlife is linked to climate change in northern Canada and sustained surveillance could be used to measure human health risks
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